RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 HMGN4O00479 90 aa7.79□□□□□ -1.16
DHFR-202ENST00000504396 SYNGR3O43761 229 aa7.79□□□□□ -1.16
DHFR-202ENST00000504396 SLC43A1O75387 559 aa7.79□□□□□ -1.16
DHFR-202ENST00000504396 SPAG7O75391 227 aa7.79□□□□□ -1.16
DHFR-202ENST00000504396 AHSA1O95433 338 aa7.79□□□□□ -1.16
DHFR-202ENST00000504396 ATP6V1G2O95670 118 aa7.79□□□□□ -1.16
DHFR-202ENST00000504396 PNPP00491 289 aa7.79□□□□□ -1.16
DHFR-202ENST00000504396 TFP02787 698 aa7.79□□□□□ -1.16
DHFR-202ENST00000504396 CD79AP11912 226 aa7.79□□□□□ -1.16
DHFR-202ENST00000504396 ZNF43P17038 809 aa7.79□□□□□ -1.16
DHFR-202ENST00000504396 ALDH3B1P43353 468 aa7.79□□□□□ -1.16
DHFR-202ENST00000504396 EVX1P49640 407 aa7.79□□□□□ -1.16
DHFR-202ENST00000504396 COMPP49747 757 aaPredicted RBP7.79□□□□□ -1.16
DHFR-202ENST00000504396 SEC24CP53992 1094 aa7.79□□□□□ -1.16
DHFR-202ENST00000504396 HILS1P60008 231 aa7.79□□□□□ -1.16
DHFR-202ENST00000504396 GALK2Q01415 458 aa7.79□□□□□ -1.16
DHFR-202ENST00000504396 C1DQ13901 141 aaKnown RBP7.79□□□□□ -1.16
DHFR-202ENST00000504396 CEACAM16Q2WEN9 425 aa7.79□□□□□ -1.16
DHFR-202ENST00000504396 C1orf140Q5VVS0 124 aa7.79□□□□□ -1.16
DHFR-202ENST00000504396 WBP2NLQ6ICG8 309 aa7.79□□□□□ -1.16
DHFR-202ENST00000504396 CROCCP2Q86T23 111 aa7.79□□□□□ -1.16
DHFR-202ENST00000504396 CARM1Q86X55 608 aa7.79□□□□□ -1.16
DHFR-202ENST00000504396 PEX5LQ8IYB4 626 aa7.79□□□□□ -1.16
DHFR-202ENST00000504396 BPIFB2Q8N4F0 458 aa7.79□□□□□ -1.16
DHFR-202ENST00000504396 MGARPQ8TDB4 240 aa7.79□□□□□ -1.16
DHFR-202ENST00000504396 TLCD1Q96CP7 247 aa7.79□□□□□ -1.16
DHFR-202ENST00000504396 MRPL37Q9BZE1 423 aaKnown RBP7.79□□□□□ -1.16
DHFR-202ENST00000504396 SLC38A1Q9H2H9 487 aa7.79□□□□□ -1.16
DHFR-202ENST00000504396 NELFAQ9H3P2 528 aa7.79□□□□□ -1.16
DHFR-202ENST00000504396 RABEP2Q9H5N1 569 aa7.79□□□□□ -1.16
DHFR-202ENST00000504396 CCDC134Q9H6E4 229 aa7.79□□□□□ -1.16
DHFR-202ENST00000504396 RLIMQ9NVW2 624 aa7.79□□□□□ -1.16
DHFR-202ENST00000504396 SLC17A7Q9P2U7 560 aa7.79□□□□□ -1.16
DHFR-202ENST00000504396 BTNL2Q9UIR0 455 aa7.79□□□□□ -1.16
DHFR-202ENST00000504396 FZR1Q9UM11 496 aa7.79□□□□□ -1.16
DHFR-202ENST00000504396 TMEM129A0AVI4 362 aa7.78□□□□□ -1.16
DHFR-202ENST00000504396 TMEM89A2RUT3 159 aa7.78□□□□□ -1.16
DHFR-202ENST00000504396 HPXP02790 462 aa7.78□□□□□ -1.16
DHFR-202ENST00000504396 RNASE1P07998 156 aaKnown RBP7.78□□□□□ -1.16
DHFR-202ENST00000504396 TFPTP0C1Z6 253 aa7.78□□□□□ -1.16
DHFR-202ENST00000504396 GAAP10253 952 aa7.78□□□□□ -1.16
DHFR-202ENST00000504396 ACHEP22303 614 aa7.78□□□□□ -1.16
DHFR-202ENST00000504396 S100A3P33764 101 aa7.78□□□□□ -1.16
DHFR-202ENST00000504396 RPS5P46782 204 aaKnown RBP7.78□□□□□ -1.16
DHFR-202ENST00000504396 LIMS1P48059 325 aa7.78□□□□□ -1.16
DHFR-202ENST00000504396 P2RY4P51582 365 aa7.78□□□□□ -1.16
DHFR-202ENST00000504396 NME5P56597 212 aa7.78□□□□□ -1.16
DHFR-202ENST00000504396 ELF3P78545 371 aaPredicted RBP7.78□□□□□ -1.16
DHFR-202ENST00000504396 MAD2L1BPQ15013 274 aaPredicted RBP7.78□□□□□ -1.16
DHFR-202ENST00000504396 TRMT5Q32P41 509 aaKnown RBP7.78□□□□□ -1.16
DHFR-202ENST00000504396 ALKBH6Q3KRA9 238 aa7.78□□□□□ -1.16
DHFR-202ENST00000504396 SLC9B1Q4ZJI4 515 aa7.78□□□□□ -1.16
DHFR-202ENST00000504396 AWAT1Q58HT5 328 aa7.78□□□□□ -1.16
DHFR-202ENST00000504396 SPANXN4Q5MJ08 99 aa7.78□□□□□ -1.16
DHFR-202ENST00000504396 ELFN2Q5R3F8 820 aa7.78□□□□□ -1.16
DHFR-202ENST00000504396 CARD17Q5XLA6 110 aa7.78□□□□□ -1.16
DHFR-202ENST00000504396 EPHX4Q8IUS5 362 aa7.78□□□□□ -1.16
DHFR-202ENST00000504396 RDH5Q92781 318 aa7.78□□□□□ -1.16
DHFR-202ENST00000504396 MRPL24Q96A35 216 aaKnown RBP7.78□□□□□ -1.16
DHFR-202ENST00000504396 CCDC115Q96NT0 180 aa7.78□□□□□ -1.16
DHFR-202ENST00000504396 PANX1Q96RD7 426 aa7.78□□□□□ -1.16
DHFR-202ENST00000504396 SUCNR1Q9BXA5 334 aa7.78□□□□□ -1.16
DHFR-202ENST00000504396 MS4A5Q9H3V2 200 aa7.78□□□□□ -1.16
DHFR-202ENST00000504396 ARMC7Q9H6L4 198 aa7.78□□□□□ -1.16
DHFR-202ENST00000504396 GPR35Q9HC97 309 aa7.78□□□□□ -1.16
DHFR-202ENST00000504396 ZNF275Q9NSD4 429 aaPredicted RBP7.78□□□□□ -1.16
DHFR-202ENST00000504396 MBNL3Q9NUK0 354 aaKnown RBP7.78□□□□□ -1.16
DHFR-202ENST00000504396 CALML5Q9NZT1 146 aa7.78□□□□□ -1.16
DHFR-202ENST00000504396 DUSP13Q9UII6 198 aa7.78□□□□□ -1.16
DHFR-202ENST00000504396 PCDHGB1Q9Y5G3 927 aa7.78□□□□□ -1.16
DHFR-202ENST00000504396 TRAV20A0A0B4J274 112 aa7.78□□□□□ -1.16
DHFR-202ENST00000504396 CDHR4A6H8M9 788 aa7.78□□□□□ -1.16
DHFR-202ENST00000504396 ZNF503-AS2A6NEH8 195 aa7.78□□□□□ -1.16
DHFR-202ENST00000504396 E9PBE3 544 aa7.78□□□□□ -1.16
DHFR-202ENST00000504396 M0R3G1 203 aa7.78□□□□□ -1.16
DHFR-202ENST00000504396 WNT9BO14905 357 aa7.78□□□□□ -1.16
DHFR-202ENST00000504396 AKAP8O43823 692 aaKnown RBP7.78□□□□□ -1.16
DHFR-202ENST00000504396 NPIPB7O75200 414 aa7.78□□□□□ -1.16
DHFR-202ENST00000504396 ZNF432O94892 652 aa7.78□□□□□ -1.16
DHFR-202ENST00000504396 BCL10O95999 233 aa7.78□□□□□ -1.16
DHFR-202ENST00000504396 HLA-HP01893 362 aa7.78□□□□□ -1.16
DHFR-202ENST00000504396 C1QCP02747 245 aa7.78□□□□□ -1.16
DHFR-202ENST00000504396 PF4P02776 101 aa7.78□□□□□ -1.16
DHFR-202ENST00000504396 BPGMP07738 259 aa7.78□□□□□ -1.16
DHFR-202ENST00000504396 PNMTP11086 282 aa7.78□□□□□ -1.16
DHFR-202ENST00000504396 NAT2P11245 290 aa7.78□□□□□ -1.16
DHFR-202ENST00000504396 NR4A1P22736 598 aa7.78□□□□□ -1.16
DHFR-202ENST00000504396 COL8A2P25067 703 aa7.78□□□□□ -1.16
DHFR-202ENST00000504396 ARRB2P32121 409 aa7.78□□□□□ -1.16
DHFR-202ENST00000504396 PTDSS1P48651 473 aaKnown RBP7.78□□□□□ -1.16
DHFR-202ENST00000504396 RPS23P62266 143 aaKnown RBP7.78□□□□□ -1.16
DHFR-202ENST00000504396 MRPS11P82912 194 aaKnown RBP7.78□□□□□ -1.16
DHFR-202ENST00000504396 PIGFQ07326 219 aa7.78□□□□□ -1.16
DHFR-202ENST00000504396 CHI3L2Q15782 390 aa7.78□□□□□ -1.16
DHFR-202ENST00000504396 GSG1Q2KHT4 349 aa7.78□□□□□ -1.16
DHFR-202ENST00000504396 LIN52Q52LA3 116 aa7.78□□□□□ -1.16
DHFR-202ENST00000504396 C5orf46Q6UWT4 87 aa7.78□□□□□ -1.16
DHFR-202ENST00000504396 ZNF836Q6ZNA1 936 aa7.78□□□□□ -1.16
DHFR-202ENST00000504396 ZNF621Q6ZSS3 439 aa7.78□□□□□ -1.16
DHFR-202ENST00000504396 USP43Q70EL4 1123 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms