RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 KIAA1671Q9BY89 1806 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 IGKV1-8A0A0C4DH67 115 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 TMEM218A2RU14 115 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 TRAPPC13A5PLN9 417 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 RCBTB2O95199 551 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 HLA-AP01891 365 aaKnown RBP6.97□□□□□ -1.29
NEDD9-208ENST00000504387 HLA-DQA2P01906 255 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 NGFRP08138 427 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 ADH5P11766 374 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 PCSK2P16519 638 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 DDX6P26196 483 aaKnown RBP eCLIP6.97□□□□□ -1.292e-6■■□□□ 11.5
NEDD9-208ENST00000504387 MPGP29372 298 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 GABRA3P34903 492 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 MNDAP41218 407 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 SHC2P98077 582 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 SNTB1Q13884 538 aaKnown RBP6.97□□□□□ -1.29
NEDD9-208ENST00000504387 MRGPREQ86SM8 312 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 SVBPQ8N300 66 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 GALNT16Q8N428 558 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 SPICQ8N5J4 248 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 TEX19Q8NA77 164 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 ZNF296Q8WUU4 475 aaPredicted RBP6.97□□□□□ -1.29
NEDD9-208ENST00000504387 TSEN15Q8WW01 171 aaKnown RBP6.97□□□□□ -1.29
NEDD9-208ENST00000504387 C14orf79Q96F83 325 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 CNN2Q99439 309 aaKnown RBP6.97□□□□□ -1.29
NEDD9-208ENST00000504387 SLC6A7Q99884 636 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 GSN-AS1Q9NRJ2 163 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 CGGBP1Q9UFW8 167 aaPredicted RBP6.97□□□□□ -1.29
NEDD9-208ENST00000504387 KCNE5Q9UJ90 142 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 MKL2Q9ULH7 1088 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 FBXO24O75426 580 aa6.96□□□□□ -1.29
NEDD9-208ENST00000504387 GP1BAP07359 652 aa6.96□□□□□ -1.29
NEDD9-208ENST00000504387 OR4E1P0C645 316 aa6.96□□□□□ -1.29
NEDD9-208ENST00000504387 CCKBRP32239 447 aa6.96□□□□□ -1.29
NEDD9-208ENST00000504387 ZNF136P52737 540 aa6.96□□□□□ -1.29
NEDD9-208ENST00000504387 PPP2CBP62714 309 aa6.96□□□□□ -1.29
NEDD9-208ENST00000504387 PPIAP62937 165 aaKnown RBP6.96□□□□□ -1.29
NEDD9-208ENST00000504387 PPP2CAP67775 309 aa6.96□□□□□ -1.29
NEDD9-208ENST00000504387 SLC7A9P82251 487 aa6.96□□□□□ -1.29
NEDD9-208ENST00000504387 ELAVL1Q15717 326 aaKnown RBP6.96□□□□□ -1.29
NEDD9-208ENST00000504387 C2orf27AQ580R0 203 aa6.96□□□□□ -1.29
NEDD9-208ENST00000504387 TMEM31Q5JXX7 168 aa6.96□□□□□ -1.29
NEDD9-208ENST00000504387 NAA40Q86UY6 237 aa6.96□□□□□ -1.29
NEDD9-208ENST00000504387 LNX2Q8N448 690 aa6.96□□□□□ -1.29
NEDD9-208ENST00000504387 COX18Q8N8Q8 333 aa6.96□□□□□ -1.29
NEDD9-208ENST00000504387 OR4N2Q8NGD1 307 aa6.96□□□□□ -1.29
NEDD9-208ENST00000504387 DTD2Q96FN9 168 aa6.96□□□□□ -1.29
NEDD9-208ENST00000504387 C10orf90Q96M02 699 aa6.96□□□□□ -1.29
NEDD9-208ENST00000504387 ZNF285Q96NJ3 590 aa6.96□□□□□ -1.29
NEDD9-208ENST00000504387 ARHGDIGQ99819 225 aa6.96□□□□□ -1.29
NEDD9-208ENST00000504387 MBD2Q9UBB5 411 aa6.96□□□□□ -1.29
NEDD9-208ENST00000504387 MPDZO75970 2070 aa6.96□□□□□ -1.3
NEDD9-208ENST00000504387 MED12Q93074 2177 aa6.96□□□□□ -1.3
NEDD9-208ENST00000504387 METTL21EPA6NDL7 271 aa6.96□□□□□ -1.3
NEDD9-208ENST00000504387 RAB3DO95716 219 aa6.96□□□□□ -1.3
NEDD9-208ENST00000504387 PRNPP04156 253 aa6.96□□□□□ -1.3
NEDD9-208ENST00000504387 ADRB3P13945 408 aa6.96□□□□□ -1.3
NEDD9-208ENST00000504387 PGAM2P15259 253 aa6.96□□□□□ -1.3
NEDD9-208ENST00000504387 NQO2P16083 231 aa6.96□□□□□ -1.3
NEDD9-208ENST00000504387 CEBPBP17676 345 aa6.96□□□□□ -1.3
NEDD9-208ENST00000504387 ITGB8P26012 769 aa6.96□□□□□ -1.3
NEDD9-208ENST00000504387 TM4SF4P48230 202 aa6.96□□□□□ -1.3
NEDD9-208ENST00000504387 CEBPGP53567 150 aa6.96□□□□□ -1.3
NEDD9-208ENST00000504387 RAG2P55895 527 aa6.96□□□□□ -1.3
NEDD9-208ENST00000504387 TAS2R43P59537 309 aa6.96□□□□□ -1.3
NEDD9-208ENST00000504387 NOGQ13253 232 aa6.96□□□□□ -1.3
NEDD9-208ENST00000504387 TMEM44Q2T9K0 475 aa6.96□□□□□ -1.3
NEDD9-208ENST00000504387 ALG10BQ5I7T1 473 aa6.96□□□□□ -1.3
NEDD9-208ENST00000504387 LIPNQ5VXI9 398 aa6.96□□□□□ -1.3
NEDD9-208ENST00000504387 OR52W1Q6IF63 320 aa6.96□□□□□ -1.3
NEDD9-208ENST00000504387 CLEC9AQ6UXN8 241 aa6.96□□□□□ -1.3
NEDD9-208ENST00000504387 DCUN1D3Q8IWE4 304 aa6.96□□□□□ -1.3
NEDD9-208ENST00000504387 OR5K2Q8NHB8 316 aa6.96□□□□□ -1.3
NEDD9-208ENST00000504387 ELP5Q8TE02 316 aa6.96□□□□□ -1.3
NEDD9-208ENST00000504387 FGF13Q92913 245 aa6.96□□□□□ -1.3
NEDD9-208ENST00000504387 CMBLQ96DG6 245 aa6.96□□□□□ -1.3
NEDD9-208ENST00000504387 ACTRT3Q9BYD9 372 aa6.96□□□□□ -1.3
NEDD9-208ENST00000504387 ZNF350Q9GZX5 532 aa6.96□□□□□ -1.3
NEDD9-208ENST00000504387 BCL2L10Q9HD36 194 aa6.96□□□□□ -1.3
NEDD9-208ENST00000504387 KRCC1Q9NPI7 259 aaPredicted RBP6.96□□□□□ -1.3
NEDD9-208ENST00000504387 STARD5Q9NSY2 213 aa6.96□□□□□ -1.3
NEDD9-208ENST00000504387 RASL12Q9NYN1 266 aa6.96□□□□□ -1.3
NEDD9-208ENST00000504387 GHRLQ9UBU3 117 aa6.96□□□□□ -1.3
NEDD9-208ENST00000504387 ZNF629Q9UEG4 869 aaPredicted RBP6.96□□□□□ -1.3
NEDD9-208ENST00000504387 STEAP1Q9UHE8 339 aa6.96□□□□□ -1.3
NEDD9-208ENST00000504387 KLHDC2Q9Y2U9 406 aa6.96□□□□□ -1.3
NEDD9-208ENST00000504387 SLC22A7Q9Y694 548 aa6.96□□□□□ -1.3
NEDD9-208ENST00000504387 CELSR3Q9NYQ7 3312 aa6.96□□□□□ -1.3
NEDD9-208ENST00000504387 A0A0A6YYD5 115 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 A0A1W2PP55 124 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 TMEM82A0PJX8 343 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 LATS1O95835 1130 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 PLGP00747 810 aaPredicted RBP6.95□□□□□ -1.3
NEDD9-208ENST00000504387 SERPINA5P05154 406 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 CD34P28906 385 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 PBX2P40425 430 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 HAAOP46952 286 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 POU3F4P49335 361 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 ZNF528Q3MIS6 628 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 CCDC157Q569K6 752 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms