RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 SSX4O60224 188 aa12.14□□□□□ -0.47
PDLIM7-211ENST00000504318 MT-ATP6P00846 226 aa12.14□□□□□ -0.47
PDLIM7-211ENST00000504318 TSPAN19P0C672 248 aa12.14□□□□□ -0.47
PDLIM7-211ENST00000504318 CBR1P16152 277 aa12.14□□□□□ -0.47
PDLIM7-211ENST00000504318 FUT4P22083 530 aa12.14□□□□□ -0.47
PDLIM7-211ENST00000504318 PAX7P23759 505 aa12.14□□□□□ -0.47
PDLIM7-211ENST00000504318 GTF2E2P29084 291 aaKnown RBP12.14□□□□□ -0.47
PDLIM7-211ENST00000504318 POU3F1Q03052 451 aaPredicted RBP12.14□□□□□ -0.47
PDLIM7-211ENST00000504318 ZP4Q12836 540 aa12.14□□□□□ -0.47
PDLIM7-211ENST00000504318 ADIPOQQ15848 244 aa12.14□□□□□ -0.47
PDLIM7-211ENST00000504318 HMBOX1Q6NT76 420 aa12.14□□□□□ -0.47
PDLIM7-211ENST00000504318 ASRGL1Q7L266 308 aa12.14□□□□□ -0.47
PDLIM7-211ENST00000504318 UEVLDQ8IX04 471 aa12.14□□□□□ -0.47
PDLIM7-211ENST00000504318 FBXL14Q8N1E6 418 aa12.14□□□□□ -0.47
PDLIM7-211ENST00000504318 LRRC17Q8N6Y2 441 aa12.14□□□□□ -0.47
PDLIM7-211ENST00000504318 PIK3C3Q8NEB9 887 aa12.14□□□□□ -0.47
PDLIM7-211ENST00000504318 NANOS1Q8WY41 292 aaKnown RBP12.14□□□□□ -0.47
PDLIM7-211ENST00000504318 ARMCX1Q9P291 453 aa12.14□□□□□ -0.47
PDLIM7-211ENST00000504318 GMPR2Q9P2T1 348 aaKnown RBP12.14□□□□□ -0.47
PDLIM7-211ENST00000504318 POU2F3Q9UKI9 436 aa12.14□□□□□ -0.47
PDLIM7-211ENST00000504318 SLC7A7Q9UM01 511 aa12.14□□□□□ -0.47
PDLIM7-211ENST00000504318 NOX1Q9Y5S8 564 aa12.14□□□□□ -0.47
PDLIM7-211ENST00000504318 RTTNQ86VV8 2226 aa12.14□□□□□ -0.47
PDLIM7-211ENST00000504318 IGHV2OR16-5A0A0B4J2B6 119 aa12.13□□□□□ -0.47
PDLIM7-211ENST00000504318 TRAPPC13A5PLN9 417 aa12.13□□□□□ -0.47
PDLIM7-211ENST00000504318 BBIP1A8MTZ0 92 aa12.13□□□□□ -0.47
PDLIM7-211ENST00000504318 ANKRD65E5RJM6 399 aa12.13□□□□□ -0.47
PDLIM7-211ENST00000504318 MRASO14807 208 aa12.13□□□□□ -0.47
PDLIM7-211ENST00000504318 KRT33AO76009 404 aa12.13□□□□□ -0.47
PDLIM7-211ENST00000504318 SEC14L2O76054 403 aa12.13□□□□□ -0.47
PDLIM7-211ENST00000504318 LY6HO94772 140 aa12.13□□□□□ -0.47
PDLIM7-211ENST00000504318 NPPAP01160 153 aa12.13□□□□□ -0.47
PDLIM7-211ENST00000504318 TNFRSF1BP20333 461 aa12.13□□□□□ -0.47
PDLIM7-211ENST00000504318 PCSK6P29122 969 aa12.13□□□□□ -0.47
PDLIM7-211ENST00000504318 PMS2P3Q13401 168 aa12.13□□□□□ -0.47
PDLIM7-211ENST00000504318 C1DQ13901 141 aaKnown RBP12.13□□□□□ -0.47
PDLIM7-211ENST00000504318 CYLC2Q14093 348 aaPredicted RBP12.13□□□□□ -0.47
PDLIM7-211ENST00000504318 EFNB3Q15768 340 aa12.13□□□□□ -0.47
PDLIM7-211ENST00000504318 MSMPQ1L6U9 139 aa12.13□□□□□ -0.47
PDLIM7-211ENST00000504318 DNAL1Q4LDG9 190 aa12.13□□□□□ -0.47
PDLIM7-211ENST00000504318 C8orf82Q6P1X6 216 aaPredicted RBP12.13□□□□□ -0.47
PDLIM7-211ENST00000504318 KLHL24Q6TFL4 600 aa12.13□□□□□ -0.47
PDLIM7-211ENST00000504318 MDP1Q86V88 176 aa12.13□□□□□ -0.47
PDLIM7-211ENST00000504318 SNX32Q86XE0 403 aa12.13□□□□□ -0.47
PDLIM7-211ENST00000504318 ARHGAP24Q8N264 748 aa12.13□□□□□ -0.47
PDLIM7-211ENST00000504318 GPR137CQ8N3F9 429 aa12.13□□□□□ -0.47
PDLIM7-211ENST00000504318 ZNF525Q8N782 197 aa12.13□□□□□ -0.47
PDLIM7-211ENST00000504318 NUP37Q8NFH4 326 aa12.13□□□□□ -0.47
PDLIM7-211ENST00000504318 VANGL1Q8TAA9 524 aaPredicted RBP12.13□□□□□ -0.47
PDLIM7-211ENST00000504318 TMEM54Q969K7 222 aa12.13□□□□□ -0.47
PDLIM7-211ENST00000504318 ADAD1Q96M93 576 aaKnown RBP12.13□□□□□ -0.47
PDLIM7-211ENST00000504318 HS6ST2Q96MM7 605 aa12.13□□□□□ -0.47
PDLIM7-211ENST00000504318 SORCS2Q96PQ0 1159 aa12.13□□□□□ -0.47
PDLIM7-211ENST00000504318 ASPNQ9BXN1 380 aa12.13□□□□□ -0.47
PDLIM7-211ENST00000504318 SLC19A3Q9BZV2 496 aa12.13□□□□□ -0.47
PDLIM7-211ENST00000504318 CA10Q9NS85 328 aa12.13□□□□□ -0.47
PDLIM7-211ENST00000504318 ARL8BQ9NVJ2 186 aa12.13□□□□□ -0.47
PDLIM7-211ENST00000504318 MALRD1Q5VYJ5 2156 aa12.13□□□□□ -0.47
PDLIM7-211ENST00000504318 TMEM129A0AVI4 362 aa12.12□□□□□ -0.47
PDLIM7-211ENST00000504318 KIAA1324LA8MWY0 1029 aaPredicted RBP12.12□□□□□ -0.47
PDLIM7-211ENST00000504318 VWC2LB2RUY7 222 aa12.12□□□□□ -0.47
PDLIM7-211ENST00000504318 M0R3G1 203 aa12.12□□□□□ -0.47
PDLIM7-211ENST00000504318 AKAP8O43823 692 aaKnown RBP12.12□□□□□ -0.47
PDLIM7-211ENST00000504318 CD5LO43866 347 aa12.12□□□□□ -0.47
PDLIM7-211ENST00000504318 GPRIN2O60269 458 aa12.12□□□□□ -0.47
PDLIM7-211ENST00000504318 PDE5AO76074 875 aa12.12□□□□□ -0.47
PDLIM7-211ENST00000504318 CH25HO95992 272 aa12.12□□□□□ -0.47
PDLIM7-211ENST00000504318 T-ENOLP0DO92 83 aa12.12□□□□□ -0.47
PDLIM7-211ENST00000504318 NQO1P15559 274 aaKnown RBP12.12□□□□□ -0.47
PDLIM7-211ENST00000504318 ZNF14P17017 642 aaPredicted RBP12.12□□□□□ -0.47
PDLIM7-211ENST00000504318 UGT2B15P54855 530 aa12.12□□□□□ -0.47
PDLIM7-211ENST00000504318 UBE2NP61088 152 aaKnown RBP12.12□□□□□ -0.47
PDLIM7-211ENST00000504318 CAMK2DQ13557 499 aa12.12□□□□□ -0.47
PDLIM7-211ENST00000504318 MAPRE2Q15555 327 aa12.12□□□□□ -0.47
PDLIM7-211ENST00000504318 INTS11Q5TA45 600 aaKnown RBP12.12□□□□□ -0.47
PDLIM7-211ENST00000504318 CARD17Q5XLA6 110 aa12.12□□□□□ -0.47
PDLIM7-211ENST00000504318 CARM1Q86X55 608 aa12.12□□□□□ -0.47
PDLIM7-211ENST00000504318 NKAIN4Q8IVV8 208 aa12.12□□□□□ -0.47
PDLIM7-211ENST00000504318 DEPDC4Q8N2C3 294 aa12.12□□□□□ -0.47
PDLIM7-211ENST00000504318 C10orf105Q8TEF2 133 aa12.12□□□□□ -0.47
PDLIM7-211ENST00000504318 MPP4Q96JB8 637 aa12.12□□□□□ -0.47
PDLIM7-211ENST00000504318 SEPHS2Q99611 448 aa12.12□□□□□ -0.47
PDLIM7-211ENST00000504318 PLK3Q9H4B4 646 aa12.12□□□□□ -0.47
PDLIM7-211ENST00000504318 SELENONQ9NZV5 590 aa12.12□□□□□ -0.47
PDLIM7-211ENST00000504318 SLC13A4Q9UKG4 626 aa12.12□□□□□ -0.47
PDLIM7-211ENST00000504318 FBN1P35555 2871 aaKnown RBP12.11□□□□□ -0.47
PDLIM7-211ENST00000504318 LOC100653049A0A140TA62 436 aa12.11□□□□□ -0.47
PDLIM7-211ENST00000504318 FAM220BPB1ANY3 271 aa12.11□□□□□ -0.47
PDLIM7-211ENST00000504318 GYG2O15488 501 aa12.11□□□□□ -0.47
PDLIM7-211ENST00000504318 KRT34O76011 436 aa12.11□□□□□ -0.47
PDLIM7-211ENST00000504318 IGF2P01344 180 aa12.11□□□□□ -0.47
PDLIM7-211ENST00000504318 IFNGR1P15260 489 aa12.11□□□□□ -0.47
PDLIM7-211ENST00000504318 EFNA4P52798 201 aa12.11□□□□□ -0.47
PDLIM7-211ENST00000504318 NUDT6P53370 316 aa12.11□□□□□ -0.47
PDLIM7-211ENST00000504318 LOXL1Q08397 574 aaPredicted RBP12.11□□□□□ -0.47
PDLIM7-211ENST00000504318 HIST3H3Q16695 136 aa12.11□□□□□ -0.47
PDLIM7-211ENST00000504318 LRFN4Q6PJG9 635 aa12.11□□□□□ -0.47
PDLIM7-211ENST00000504318 TREML1Q86YW5 311 aa12.11□□□□□ -0.47
PDLIM7-211ENST00000504318 OR6X1Q8NH79 312 aa12.11□□□□□ -0.47
PDLIM7-211ENST00000504318 PFN4Q8NHR9 129 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms