RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 RELL2Q8NC24 303 aaPredicted RBP8.89□□□□□ -0.99
NUP54-203ENST00000504173 ICA1LQ8NDH6 482 aa8.89□□□□□ -0.99
NUP54-203ENST00000504173 FANK1Q8TC84 345 aa8.89□□□□□ -0.99
NUP54-203ENST00000504173 CA5BP1Q8WTZ4 195 aa8.89□□□□□ -0.99
NUP54-203ENST00000504173 GTPBP3Q969Y2 492 aaKnown RBP8.89□□□□□ -0.99
NUP54-203ENST00000504173 STARD4Q96DR4 205 aa8.89□□□□□ -0.99
NUP54-203ENST00000504173 NRBF2Q96F24 287 aa8.89□□□□□ -0.99
NUP54-203ENST00000504173 ZNF385AQ96PM9 386 aaKnown RBP8.89□□□□□ -0.99
NUP54-203ENST00000504173 TNFRSF13CQ96RJ3 184 aa8.89□□□□□ -0.99
NUP54-203ENST00000504173 PIGMQ9H3S5 423 aa8.89□□□□□ -0.99
NUP54-203ENST00000504173 ZNF556Q9HAH1 456 aa8.89□□□□□ -0.99
NUP54-203ENST00000504173 FANCFQ9NPI8 374 aa8.89□□□□□ -0.99
NUP54-203ENST00000504173 INIPQ9NRY2 104 aa8.89□□□□□ -0.99
NUP54-203ENST00000504173 TAS2R5Q9NYW4 299 aa8.89□□□□□ -0.99
NUP54-203ENST00000504173 KIF17Q9P2E2 1029 aa8.89□□□□□ -0.99
NUP54-203ENST00000504173 INTS1Q8N201 2190 aaKnown RBP8.88□□□□□ -0.99
NUP54-203ENST00000504173 A0A1W2PRG6 482 aa8.88□□□□□ -0.99
NUP54-203ENST00000504173 SAC3D1A6NKF1 404 aa8.88□□□□□ -0.99
NUP54-203ENST00000504173 MCIDASD6RGH6 385 aa8.88□□□□□ -0.99
NUP54-203ENST00000504173 G3V2T6 193 aa8.88□□□□□ -0.99
NUP54-203ENST00000504173 NDUFB2O95178 105 aa8.88□□□□□ -0.99
NUP54-203ENST00000504173 ADAP00813 363 aa8.88□□□□□ -0.99
NUP54-203ENST00000504173 F13BP05160 661 aa8.88□□□□□ -0.99
NUP54-203ENST00000504173 TSPAN19P0C672 248 aa8.88□□□□□ -0.99
NUP54-203ENST00000504173 ANXA8P13928 327 aa8.88□□□□□ -0.99
NUP54-203ENST00000504173 IFNGR1P15260 489 aa8.88□□□□□ -0.99
NUP54-203ENST00000504173 AGAP20933 346 aa8.88□□□□□ -0.99
NUP54-203ENST00000504173 GSTM3P21266 225 aa8.88□□□□□ -0.99
NUP54-203ENST00000504173 PRKACGP22612 351 aa8.88□□□□□ -0.99
NUP54-203ENST00000504173 CTXN1P60606 82 aa8.88□□□□□ -0.99
NUP54-203ENST00000504173 ELF3P78545 371 aaPredicted RBP8.88□□□□□ -0.99
NUP54-203ENST00000504173 TOP3AQ13472 1001 aaPredicted RBP8.88□□□□□ -0.99
NUP54-203ENST00000504173 RCN1Q15293 331 aa8.88□□□□□ -0.99
NUP54-203ENST00000504173 SLC25A35Q3KQZ1 300 aa8.88□□□□□ -0.99
NUP54-203ENST00000504173 SMARCD3Q6STE5 483 aa8.88□□□□□ -0.99
NUP54-203ENST00000504173 AAED1Q7RTV5 226 aa8.88□□□□□ -0.99
NUP54-203ENST00000504173 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.88□□□□□ -0.99
NUP54-203ENST00000504173 LUZP2Q86TE4 346 aa8.88□□□□□ -0.99
NUP54-203ENST00000504173 STK32CQ86UX6 486 aa8.88□□□□□ -0.99
NUP54-203ENST00000504173 IGFN1Q86VF2 1251 aa8.88□□□□□ -0.99
NUP54-203ENST00000504173 ZDHHC13Q8IUH4 622 aa8.88□□□□□ -0.99
NUP54-203ENST00000504173 PQLC1Q8N2U9 271 aa8.88□□□□□ -0.99
NUP54-203ENST00000504173 SVOPLQ8N434 492 aa8.88□□□□□ -0.99
NUP54-203ENST00000504173 ZIC4Q8N9L1 334 aa8.88□□□□□ -0.99
NUP54-203ENST00000504173 LILRB4Q8NHJ6 448 aa8.88□□□□□ -0.99
NUP54-203ENST00000504173 TMEM45BQ96B21 275 aa8.88□□□□□ -0.99
NUP54-203ENST00000504173 APH1AQ96BI3 265 aa8.88□□□□□ -0.99
NUP54-203ENST00000504173 FEVQ99581 238 aa8.88□□□□□ -0.99
NUP54-203ENST00000504173 NIPSNAP1Q9BPW8 284 aa8.88□□□□□ -0.99
NUP54-203ENST00000504173 DGCR6LQ9BY27 220 aa8.88□□□□□ -0.99
NUP54-203ENST00000504173 OPN3Q9H1Y3 402 aaPredicted RBP8.88□□□□□ -0.99
NUP54-203ENST00000504173 OR52D1Q9H346 318 aa8.88□□□□□ -0.99
NUP54-203ENST00000504173 PARPBPQ9NWS1 579 aa8.88□□□□□ -0.99
NUP54-203ENST00000504173 MED29Q9NX70 200 aa8.88□□□□□ -0.99
NUP54-203ENST00000504173 RCE1Q9Y256 329 aa8.88□□□□□ -0.99
NUP54-203ENST00000504173 SIGLEC7Q9Y286 467 aa8.88□□□□□ -0.99
NUP54-203ENST00000504173 MAGED1Q9Y5V3 778 aaPredicted RBP8.88□□□□□ -0.99
NUP54-203ENST00000504173 ZNF726A6NNF4 738 aa8.87□□□□□ -0.99
NUP54-203ENST00000504173 C19orf84I3L1E1 186 aa8.87□□□□□ -0.99
NUP54-203ENST00000504173 MSTNO14793 375 aa8.87□□□□□ -0.99
NUP54-203ENST00000504173 WIPF1O43516 503 aa8.87□□□□□ -0.99
NUP54-203ENST00000504173 PTP4A3O75365 173 aa8.87□□□□□ -0.99
NUP54-203ENST00000504173 CLDN14O95500 239 aa8.87□□□□□ -0.99
NUP54-203ENST00000504173 BCL10O95999 233 aa8.87□□□□□ -0.99
NUP54-203ENST00000504173 CGAP01215 116 aa8.87□□□□□ -0.99
NUP54-203ENST00000504173 CD8BP10966 210 aa8.87□□□□□ -0.99
NUP54-203ENST00000504173 NTF4P34130 210 aa8.87□□□□□ -0.99
NUP54-203ENST00000504173 OR3A2P47893 321 aa8.87□□□□□ -0.99
NUP54-203ENST00000504173 SELENOPP49908 381 aa8.87□□□□□ -0.99
NUP54-203ENST00000504173 DAP3P51398 398 aaKnown RBP8.87□□□□□ -0.99
NUP54-203ENST00000504173 BIDP55957 195 aa8.87□□□□□ -0.99
NUP54-203ENST00000504173 FHL1Q13642 323 aa8.87□□□□□ -0.99
NUP54-203ENST00000504173 MELKQ14680 651 aa8.87□□□□□ -0.99
NUP54-203ENST00000504173 NIPAL3Q6P499 406 aa8.87□□□□□ -0.99
NUP54-203ENST00000504173 TFAP2EQ6VUC0 442 aa8.87□□□□□ -0.99
NUP54-203ENST00000504173 ZNF620Q6ZNG0 422 aa8.87□□□□□ -0.99
NUP54-203ENST00000504173 RASSF6Q6ZTQ3 369 aa8.87□□□□□ -0.99
NUP54-203ENST00000504173 SLC35D2Q76EJ3 337 aa8.87□□□□□ -0.99
NUP54-203ENST00000504173 HDDC2Q7Z4H3 204 aa8.87□□□□□ -0.99
NUP54-203ENST00000504173 ZNF610Q8N9Z0 462 aa8.87□□□□□ -0.99
NUP54-203ENST00000504173 LRRC75AQ8NAA5 344 aa8.87□□□□□ -0.99
NUP54-203ENST00000504173 OR52L1Q8NGH7 329 aa8.87□□□□□ -0.99
NUP54-203ENST00000504173 NINJ1Q92982 152 aa8.87□□□□□ -0.99
NUP54-203ENST00000504173 TXNDC15Q96J42 360 aa8.87□□□□□ -0.99
NUP54-203ENST00000504173 SAMD8Q96LT4 415 aa8.87□□□□□ -0.99
NUP54-203ENST00000504173 KATNB1Q9BVA0 655 aa8.87□□□□□ -0.99
NUP54-203ENST00000504173 POLDIP3Q9BY77 421 aaKnown RBP8.87□□□□□ -0.99
NUP54-203ENST00000504173 UCK2Q9BZX2 261 aa8.87□□□□□ -0.99
NUP54-203ENST00000504173 GABARAPL1Q9H0R8 117 aa8.87□□□□□ -0.99
NUP54-203ENST00000504173 KCNJ16Q9NPI9 418 aa8.87□□□□□ -0.99
NUP54-203ENST00000504173 PLSCR4Q9NRQ2 329 aa8.87□□□□□ -0.99
NUP54-203ENST00000504173 IL20RAQ9UHF4 553 aa8.87□□□□□ -0.99
NUP54-203ENST00000504173 OAZ3Q9UMX2 235 aa8.87□□□□□ -0.99
NUP54-203ENST00000504173 CDH10Q9Y6N8 788 aa8.87□□□□□ -0.99
NUP54-203ENST00000504173 SLC35F4A4IF30 521 aa8.86□□□□□ -0.99
NUP54-203ENST00000504173 NKX2-6A6NCS4 301 aa8.86□□□□□ -0.99
NUP54-203ENST00000504173 NPIPB13A6NJU9 1138 aa8.86□□□□□ -0.99
NUP54-203ENST00000504173 NPIPB4C9JG80 1138 aa8.86□□□□□ -0.99
NUP54-203ENST00000504173 SLC43A1O75387 559 aa8.86□□□□□ -0.99
NUP54-203ENST00000504173 KRT33AO76009 404 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms