RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 A0A1W2PRD5 423 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 LRRIQ3A6PVS8 624 aaPredicted RBP1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 IQCF5A8MTL0 148 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 TRDCB7Z8K6 153 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 TEX46H3BTG2 121 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 M0R3G1 203 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 FCN1O00602 326 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 NDUFAB1O14561 156 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 DYNC1I1O14576 645 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 CDX4O14627 284 aaPredicted RBP1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 TNFSF11O14788 317 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 AIM2O14862 343 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 EIF3HO15372 352 aaKnown RBP eCLIP1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 CXCL13O43927 109 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 SOX15O60248 233 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 PFKFB2O60825 505 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 HUS1O60921 280 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 NIPSNAP2O75323 286 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 CRTAPO75718 401 aaPredicted RBP1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 CBR3O75828 277 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 CDK14O94921 469 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 MMP1P03956 469 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 P04436 131 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 CCDC166P0CW27 439 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 NEFHP12036 1026 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 DCKP27707 260 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 ADORA2BP29275 332 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 FOXN2P32314 431 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 OPRD1P41143 372 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 NAA10P41227 235 aaPredicted RBP1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 NPBWR2P48146 333 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 KCNJ3P48549 501 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 ARRB1P49407 418 aaPredicted RBP1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 PSMD4P55036 377 aaKnown RBP1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 UBE2IP63279 158 aaKnown RBP1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 IRX3P78415 501 aaPredicted RBP1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 IGLV3-21P80748 117 aaPredicted RBP1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 SCRN3Q0VDG4 424 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 CCDC173Q0VFZ6 552 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 RCAN2Q14206 197 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 CYTH1Q15438 398 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 MRPL23Q16540 153 aaKnown RBP1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 PAGE2BQ5JRK9 111 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 STUMQ69YW2 141 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 PVRIGQ6DKI7 326 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 TTC23LQ6PF05 361 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 SASS6Q6UVJ0 657 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 C19orf35Q6ZS72 473 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 FRA10AC1Q70Z53 315 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 MRPL21Q7Z2W9 205 aaKnown RBP1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 ZNF677Q86XU0 584 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 RBM45Q8IUH3 476 aaKnown RBP1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 APOBEC3FQ8IUX4 373 aaKnown RBP1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 ZNF584Q8IVC4 421 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 NUDCD3Q8IVD9 361 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 APRG1Q8IVJ8 170 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 FBXO16Q8IX29 292 aaPredicted RBP1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 CCDC65Q8IXS2 484 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 MYOCDQ8IZQ8 938 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 LINC01561Q8N1V8 128 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 MTURNQ8N3F0 131 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 KIR3DL3Q8N743 410 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 INO80EQ8NBZ0 244 aaPredicted RBP1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 OR51L1Q8NGJ5 315 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 KIFAP3Q92845 792 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 NAT6Q93015 286 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 TBRG4Q969Z0 631 aaKnown RBP eCLIP1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 FAM131CQ96AQ9 280 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 FAF2Q96CS3 445 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 SLC25A38Q96DW6 304 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 CYYR1Q96J86 154 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 C9orf72Q96LT7 481 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 OPALINQ96PE5 141 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 ZNF317Q96PQ6 595 aaPredicted RBP1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 XPO6Q96QU8 1125 aaKnown RBP1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 OR5B2Q96R09 309 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 KIR2DL4Q99706 377 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 LLPHQ9BRT6 129 aaKnown RBP1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 RACGAP1Q9H0H5 632 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 RAB1BQ9H0U4 201 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 RHBGQ9H310 441 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 ZNF385DQ9H6B1 395 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 CAB39LQ9H9S4 337 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 TMEM165Q9HC07 324 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 DMAP1Q9NPF5 467 aaPredicted RBP1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 ZC4H2Q9NQZ6 224 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 PAK1IP1Q9NWT1 392 aaPredicted RBP1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 VNN3Q9NY84 501 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 ADAM22Q9P0K1 906 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 MYEF2Q9P2K5 600 aaKnown RBP1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 MTRF1LQ9UGC7 380 aaKnown RBP1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 APOBEC3BQ9UH17 382 aaKnown RBP1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 KLHL21Q9UJP4 597 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 SAMD4AQ9UPU9 718 aaKnown RBP1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 MOKQ9UQ07 419 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 FLVCR1Q9Y5Y0 555 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 NSG1A0A0A6YYJ2 146 aa1.77□□□□□ -2.13
HMGB1P35-201ENST00000503360 GOLGA8QA0A0J9YX86 632 aa1.77□□□□□ -2.13
HMGB1P35-201ENST00000503360 TMEM120BA0PK00 339 aa1.77□□□□□ -2.13
HMGB1P35-201ENST00000503360 RAB19A4D1S5 217 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms