RNA–Protein interactions for RNA: ENST00000502991.5

RFC1-205, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-205ENST00000502991 SPESP1Q6UW49 350 aa3.79□□□□□ -1.8
RFC1-205ENST00000502991 SH2D5Q6ZV89 423 aa3.79□□□□□ -1.8
RFC1-205ENST00000502991 PGAP1Q75T13 922 aa3.79□□□□□ -1.8
RFC1-205ENST00000502991 SLC35D2Q76EJ3 337 aa3.79□□□□□ -1.8
RFC1-205ENST00000502991 ABHD12BQ7Z5M8 362 aaPredicted RBP3.79□□□□□ -1.8
RFC1-205ENST00000502991 TMEM178AQ8NBL3 297 aa3.79□□□□□ -1.8
RFC1-205ENST00000502991 KLHDC9Q8NEP7 349 aa3.79□□□□□ -1.8
RFC1-205ENST00000502991 OR10G7Q8NGN6 311 aa3.79□□□□□ -1.8
RFC1-205ENST00000502991 SPPL2AQ8TCT8 520 aa3.79□□□□□ -1.8
RFC1-205ENST00000502991 TCTEX1D2Q8WW35 142 aa3.79□□□□□ -1.8
RFC1-205ENST00000502991 TRUB1Q8WWH5 349 aaKnown RBP3.79□□□□□ -1.8
RFC1-205ENST00000502991 TM9SF4Q92544 642 aa3.79□□□□□ -1.8
RFC1-205ENST00000502991 MOCOSQ96EN8 888 aa3.79□□□□□ -1.8
RFC1-205ENST00000502991 CPB2Q96IY4 423 aa3.79□□□□□ -1.8
RFC1-205ENST00000502991 MAP1LC3CQ9BXW4 147 aa3.79□□□□□ -1.8
RFC1-205ENST00000502991 ANGPTL4Q9BY76 406 aa3.79□□□□□ -1.8
RFC1-205ENST00000502991 ACTR3CQ9C0K3 210 aaPredicted RBP3.79□□□□□ -1.8
RFC1-205ENST00000502991 RBKSQ9H477 322 aa3.79□□□□□ -1.8
RFC1-205ENST00000502991 PIGUQ9H490 435 aa3.79□□□□□ -1.8
RFC1-205ENST00000502991 MS4A12Q9NXJ0 267 aa3.79□□□□□ -1.8
RFC1-205ENST00000502991 STMN3Q9NZ72 180 aa3.79□□□□□ -1.8
RFC1-205ENST00000502991 THYN1Q9P016 225 aa3.79□□□□□ -1.8
RFC1-205ENST00000502991 WARS2Q9UGM6 360 aaKnown RBP3.79□□□□□ -1.8
RFC1-205ENST00000502991 KIF25Q9UIL4 384 aa3.79□□□□□ -1.8
RFC1-205ENST00000502991 LSM7Q9UK45 103 aaKnown RBP3.79□□□□□ -1.8
RFC1-205ENST00000502991 DDX19BQ9UMR2 479 aa3.79□□□□□ -1.8
RFC1-205ENST00000502991 TRPM2O94759 1503 aa3.79□□□□□ -1.8
RFC1-205ENST00000502991 CNTLNQ9NXG0 1405 aa3.78□□□□□ -1.8
RFC1-205ENST00000502991 ROCK2O75116 1388 aaKnown RBP3.78□□□□□ -1.8
RFC1-205ENST00000502991 STK36Q9NRP7 1315 aa3.78□□□□□ -1.8
RFC1-205ENST00000502991 IGHV4-4A0A075B6R2 117 aa3.78□□□□□ -1.8
RFC1-205ENST00000502991 A0A1W2PQ72 361 aa3.78□□□□□ -1.8
RFC1-205ENST00000502991 BCLAF3A2AJT9 711 aaKnown RBP3.78□□□□□ -1.8
RFC1-205ENST00000502991 C15orf61A6NNL5 157 aa3.78□□□□□ -1.8
RFC1-205ENST00000502991 ZG16O60844 167 aa3.78□□□□□ -1.8
RFC1-205ENST00000502991 NXPH4O95158 308 aa3.78□□□□□ -1.8
RFC1-205ENST00000502991 CST4P01036 141 aa3.78□□□□□ -1.8
RFC1-205ENST00000502991 AMBPP02760 352 aa3.78□□□□□ -1.8
RFC1-205ENST00000502991 PRSS1P07477 247 aa3.78□□□□□ -1.8
RFC1-205ENST00000502991 HOXD4P09016 255 aaPredicted RBP3.78□□□□□ -1.8
RFC1-205ENST00000502991 IGFBP5P24593 272 aa3.78□□□□□ -1.8
RFC1-205ENST00000502991 FASP25445 335 aa3.78□□□□□ -1.8
RFC1-205ENST00000502991 TIMP3P35625 211 aa3.78□□□□□ -1.8
RFC1-205ENST00000502991 DDOSTP39656 456 aa3.78□□□□□ -1.8
RFC1-205ENST00000502991 SLC26A3P40879 764 aa3.78□□□□□ -1.8
RFC1-205ENST00000502991 CSKP41240 450 aa3.78□□□□□ -1.8
RFC1-205ENST00000502991 GPR1P46091 355 aa3.78□□□□□ -1.8
RFC1-205ENST00000502991 ATP4BP51164 291 aa3.78□□□□□ -1.8
RFC1-205ENST00000502991 CRIP2P52943 208 aaPredicted RBP3.78□□□□□ -1.8
RFC1-205ENST00000502991 CRISP1P54107 249 aa3.78□□□□□ -1.8
RFC1-205ENST00000502991 GSTO1P78417 241 aa3.78□□□□□ -1.8
RFC1-205ENST00000502991 MRPS15P82914 257 aaKnown RBP3.78□□□□□ -1.8
RFC1-205ENST00000502991 VLDLRP98155 873 aa3.78□□□□□ -1.8
RFC1-205ENST00000502991 ZNF33AQ06730 810 aa3.78□□□□□ -1.8
RFC1-205ENST00000502991 PMS2P3Q13401 168 aa3.78□□□□□ -1.8
RFC1-205ENST00000502991 KIAA0141Q14154 515 aaPredicted RBP3.78□□□□□ -1.8
RFC1-205ENST00000502991 FAM189A2Q15884 450 aa3.78□□□□□ -1.8
RFC1-205ENST00000502991 UPP1Q16831 310 aa3.78□□□□□ -1.8
RFC1-205ENST00000502991 RPEL1Q2QD12 228 aa3.78□□□□□ -1.8
RFC1-205ENST00000502991 PTPN20Q4JDL3 420 aa3.78□□□□□ -1.8
RFC1-205ENST00000502991 SAMD4BQ5PRF9 694 aaKnown RBP3.78□□□□□ -1.8
RFC1-205ENST00000502991 LCE1EQ5T753 118 aa3.78□□□□□ -1.8
RFC1-205ENST00000502991 OR52E8Q6IFG1 317 aa3.78□□□□□ -1.8
RFC1-205ENST00000502991 TMPRSS11AQ6ZMR5 421 aa3.78□□□□□ -1.8
RFC1-205ENST00000502991 C3P1Q6ZMU1 363 aa3.78□□□□□ -1.8
RFC1-205ENST00000502991 MBOAT1Q6ZNC8 495 aa3.78□□□□□ -1.8
RFC1-205ENST00000502991 PTAR1Q7Z6K3 402 aaPredicted RBP3.78□□□□□ -1.8
RFC1-205ENST00000502991 CYP4Z1Q86W10 505 aa3.78□□□□□ -1.8
RFC1-205ENST00000502991 HOGA1Q86XE5 327 aa3.78□□□□□ -1.8
RFC1-205ENST00000502991 CMTM1Q8IZ96 169 aa3.78□□□□□ -1.8
RFC1-205ENST00000502991 SYS1Q8N2H4 156 aa3.78□□□□□ -1.8
RFC1-205ENST00000502991 TRAM1L1Q8N609 369 aa3.78□□□□□ -1.8
RFC1-205ENST00000502991 STPG4Q8N801 248 aa3.78□□□□□ -1.8
RFC1-205ENST00000502991 OR1S2Q8NGQ3 325 aa3.78□□□□□ -1.8
RFC1-205ENST00000502991 LYPD6BQ8NI32 183 aa3.78□□□□□ -1.8
RFC1-205ENST00000502991 RFESDQ8TAC1 157 aa3.78□□□□□ -1.8
RFC1-205ENST00000502991 GTF3AQ92664 365 aaKnown RBP3.78□□□□□ -1.8
RFC1-205ENST00000502991 ISOC2Q96AB3 205 aa3.78□□□□□ -1.8
RFC1-205ENST00000502991 APH1AQ96BI3 265 aa3.78□□□□□ -1.8
RFC1-205ENST00000502991 TMEM80Q96HE8 168 aa3.78□□□□□ -1.8
RFC1-205ENST00000502991 OXGR1Q96P68 337 aa3.78□□□□□ -1.8
RFC1-205ENST00000502991 WDR13Q9H1Z4 485 aa3.78□□□□□ -1.8
RFC1-205ENST00000502991 LIME1Q9H400 295 aa3.78□□□□□ -1.8
RFC1-205ENST00000502991 KIR3DX1Q9H7L2 352 aa3.78□□□□□ -1.8
RFC1-205ENST00000502991 CD209Q9NNX6 404 aa3.78□□□□□ -1.8
RFC1-205ENST00000502991 SDHAF3Q9NRP4 125 aa3.78□□□□□ -1.8
RFC1-205ENST00000502991 DEPPQ9NTK1 212 aa3.78□□□□□ -1.8
RFC1-205ENST00000502991 UXTQ9UBK9 157 aaPredicted RBP3.78□□□□□ -1.8
RFC1-205ENST00000502991 PPIL1Q9Y3C6 166 aa3.78□□□□□ -1.8
RFC1-205ENST00000502991 CBY1Q9Y3M2 126 aa3.78□□□□□ -1.8
RFC1-205ENST00000502991 CDH10Q9Y6N8 788 aa3.78□□□□□ -1.8
RFC1-205ENST00000502991 KIF13AQ9H1H9 1805 aa3.78□□□□□ -1.8
RFC1-205ENST00000502991 SPHKAPQ2M3C7 1700 aa3.78□□□□□ -1.8
RFC1-205ENST00000502991 ZC3H13Q5T200 1668 aaKnown RBP3.78□□□□□ -1.81
RFC1-205ENST00000502991 PPRC1Q5VV67 1664 aaKnown RBP3.78□□□□□ -1.81
RFC1-205ENST00000502991 MROH1Q8NDA8 1641 aa3.77□□□□□ -1.81
RFC1-205ENST00000502991 KIF1BO60333 1816 aa3.77□□□□□ -1.81
RFC1-205ENST00000502991 DIP2CQ9Y2E4 1556 aa3.77□□□□□ -1.81
RFC1-205ENST00000502991 ADGRA3Q8IWK6 1321 aa3.77□□□□□ -1.81
RFC1-205ENST00000502991 EFCAB6Q5THR3 1501 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms