RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 BRSK1Q8TDC3 778 aa3.99□□□□□ -1.77
HMGB1P3-201ENST00000502802 SLC25A38Q96DW6 304 aa3.99□□□□□ -1.77
HMGB1P3-201ENST00000502802 MBOAT4Q96T53 435 aa3.99□□□□□ -1.77
HMGB1P3-201ENST00000502802 MRPL45Q9BRJ2 306 aaKnown RBP3.99□□□□□ -1.77
HMGB1P3-201ENST00000502802 RIOK1Q9BRS2 568 aaKnown RBP3.99□□□□□ -1.77
HMGB1P3-201ENST00000502802 PAXXQ9BUH6 204 aa3.99□□□□□ -1.77
HMGB1P3-201ENST00000502802 ANKRA2Q9H9E1 313 aa3.99□□□□□ -1.77
HMGB1P3-201ENST00000502802 DCDC2Q9UHG0 476 aa3.99□□□□□ -1.77
HMGB1P3-201ENST00000502802 KLHL21Q9UJP4 597 aa3.99□□□□□ -1.77
HMGB1P3-201ENST00000502802 CSAG2Q9Y5P2 127 aa3.99□□□□□ -1.77
HMGB1P3-201ENST00000502802 TTC41PQ6P2S7 1318 aa3.98□□□□□ -1.77
HMGB1P3-201ENST00000502802 RAI1Q7Z5J4 1906 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P3-201ENST00000502802 LOC110117498-PIK3R3F6TDL0 507 aa3.98□□□□□ -1.77
HMGB1P3-201ENST00000502802 K7N7A8 449 aa3.98□□□□□ -1.77
HMGB1P3-201ENST00000502802 CASQ2O14958 399 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P3-201ENST00000502802 MBTPS2O43462 519 aa3.98□□□□□ -1.77
HMGB1P3-201ENST00000502802 PSTPIP1O43586 416 aa3.98□□□□□ -1.77
HMGB1P3-201ENST00000502802 LYPLA1O75608 230 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P3-201ENST00000502802 CTAG2O75638 210 aa3.98□□□□□ -1.77
HMGB1P3-201ENST00000502802 GATA1P15976 413 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P3-201ENST00000502802 AQP1P29972 269 aa3.98□□□□□ -1.77
HMGB1P3-201ENST00000502802 IFNA8P32881 189 aa3.98□□□□□ -1.77
HMGB1P3-201ENST00000502802 SHMT2P34897 504 aa3.98□□□□□ -1.77
HMGB1P3-201ENST00000502802 VHLP40337 213 aa3.98□□□□□ -1.77
HMGB1P3-201ENST00000502802 GPM6AP51674 278 aa3.98□□□□□ -1.77
HMGB1P3-201ENST00000502802 C21orf59P57076 290 aa3.98□□□□□ -1.77
HMGB1P3-201ENST00000502802 RGS8P57771 180 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P3-201ENST00000502802 RPS15P62841 145 aaKnown RBP3.98□□□□□ -1.77
HMGB1P3-201ENST00000502802 TLE4Q04727 773 aa3.98□□□□□ -1.77
HMGB1P3-201ENST00000502802 IL18Q14116 193 aa3.98□□□□□ -1.77
HMGB1P3-201ENST00000502802 PARP15Q460N3 678 aa3.98□□□□□ -1.77
HMGB1P3-201ENST00000502802 PAMR1Q6UXH9 720 aa3.98□□□□□ -1.77
HMGB1P3-201ENST00000502802 GSG1LQ6UXU4 331 aa3.98□□□□□ -1.77
HMGB1P3-201ENST00000502802 CENPQQ7L2Z9 268 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P3-201ENST00000502802 MOB1BQ7L9L4 216 aa3.98□□□□□ -1.77
HMGB1P3-201ENST00000502802 PPP1R27Q86WC6 154 aa3.98□□□□□ -1.77
HMGB1P3-201ENST00000502802 VRK2Q86Y07 508 aa3.98□□□□□ -1.77
HMGB1P3-201ENST00000502802 SLC38A4Q969I6 547 aa3.98□□□□□ -1.77
HMGB1P3-201ENST00000502802 TECTBQ96PL2 329 aa3.98□□□□□ -1.77
HMGB1P3-201ENST00000502802 PANX1Q96RD7 426 aa3.98□□□□□ -1.77
HMGB1P3-201ENST00000502802 C11orf70Q9BRQ4 267 aa3.98□□□□□ -1.77
HMGB1P3-201ENST00000502802 ZNF160Q9HCG1 818 aa3.98□□□□□ -1.77
HMGB1P3-201ENST00000502802 TONSLQ96HA7 1378 aa3.98□□□□□ -1.77
HMGB1P3-201ENST00000502802 NINLQ9Y2I6 1382 aa3.98□□□□□ -1.77
HMGB1P3-201ENST00000502802 ANKRD26Q9UPS8 1709 aa3.98□□□□□ -1.77
HMGB1P3-201ENST00000502802 TOGARAM1Q9Y4F4 1720 aa3.98□□□□□ -1.77
HMGB1P3-201ENST00000502802 UBR3Q6ZT12 1888 aa3.97□□□□□ -1.77
HMGB1P3-201ENST00000502802 IGKV1D-8A0A087WSZ0 117 aa3.97□□□□□ -1.77
HMGB1P3-201ENST00000502802 IGHV1OR21-1A0A087WYE8 117 aa3.97□□□□□ -1.77
HMGB1P3-201ENST00000502802 A0A0G2JRQ6 117 aa3.97□□□□□ -1.77
HMGB1P3-201ENST00000502802 A0A1W2PQ72 361 aa3.97□□□□□ -1.77
HMGB1P3-201ENST00000502802 LSM1O15116 133 aaKnown RBP3.97□□□□□ -1.77
HMGB1P3-201ENST00000502802 THY1P04216 161 aa3.97□□□□□ -1.77
HMGB1P3-201ENST00000502802 SEMG1P04279 462 aa3.97□□□□□ -1.77
HMGB1P3-201ENST00000502802 CT62P0C5K7 136 aa3.97□□□□□ -1.77
HMGB1P3-201ENST00000502802 UBTFL1P0CB47 393 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P3-201ENST00000502802 ABOP16442 354 aa3.97□□□□□ -1.77
HMGB1P3-201ENST00000502802 PRKAR2BP31323 418 aa3.97□□□□□ -1.77
HMGB1P3-201ENST00000502802 HSD17B2P37059 387 aa3.97□□□□□ -1.77
HMGB1P3-201ENST00000502802 GSSP48637 474 aa3.97□□□□□ -1.77
HMGB1P3-201ENST00000502802 ACLYP53396 1101 aa3.97□□□□□ -1.77
HMGB1P3-201ENST00000502802 TGFBIQ15582 683 aa3.97□□□□□ -1.77
HMGB1P3-201ENST00000502802 LPAL2Q16609 132 aa3.97□□□□□ -1.77
HMGB1P3-201ENST00000502802 VPS26BQ4G0F5 336 aa3.97□□□□□ -1.77
HMGB1P3-201ENST00000502802 C11orf71Q6IPW1 123 aa3.97□□□□□ -1.77
HMGB1P3-201ENST00000502802 UNQ9370/PRO34162Q6UXP9 181 aa3.97□□□□□ -1.77
HMGB1P3-201ENST00000502802 LUZP2Q86TE4 346 aa3.97□□□□□ -1.77
HMGB1P3-201ENST00000502802 MARCH9Q86YJ5 346 aa3.97□□□□□ -1.77
HMGB1P3-201ENST00000502802 ACOT4Q8N9L9 421 aa3.97□□□□□ -1.77
HMGB1P3-201ENST00000502802 ZNF485Q8NCK3 441 aa3.97□□□□□ -1.77
HMGB1P3-201ENST00000502802 OR9A1PQ8NGU1 263 aa3.97□□□□□ -1.77
HMGB1P3-201ENST00000502802 TYMSOSQ8TAI1 123 aa3.97□□□□□ -1.77
HMGB1P3-201ENST00000502802 PYROXD1Q8WU10 500 aa3.97□□□□□ -1.77
HMGB1P3-201ENST00000502802 FAM222BQ8WU58 562 aa3.97□□□□□ -1.77
HMGB1P3-201ENST00000502802 TSEN15Q8WW01 171 aaKnown RBP3.97□□□□□ -1.77
HMGB1P3-201ENST00000502802 CHCHD10Q8WYQ3 142 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P3-201ENST00000502802 STARD8Q92502 1023 aa3.97□□□□□ -1.77
HMGB1P3-201ENST00000502802 STMN2Q93045 179 aa3.97□□□□□ -1.77
HMGB1P3-201ENST00000502802 NEIL2Q969S2 332 aa3.97□□□□□ -1.77
HMGB1P3-201ENST00000502802 ZNF184Q99676 751 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P3-201ENST00000502802 SELENOIQ9C0D9 397 aa3.97□□□□□ -1.77
HMGB1P3-201ENST00000502802 MFFQ9GZY8 342 aa3.97□□□□□ -1.77
HMGB1P3-201ENST00000502802 CRLF2Q9HC73 371 aa3.97□□□□□ -1.77
HMGB1P3-201ENST00000502802 INPP5EQ9NRR6 644 aa3.97□□□□□ -1.77
HMGB1P3-201ENST00000502802 NUP50Q9UKX7 468 aa3.97□□□□□ -1.77
HMGB1P3-201ENST00000502802 V9GY05 133 aa3.97□□□□□ -1.77
HMGB1P3-201ENST00000502802 PKD1L3Q7Z443 1732 aa3.97□□□□□ -1.77
HMGB1P3-201ENST00000502802 HCFC1P51610 2035 aa3.97□□□□□ -1.77
HMGB1P3-201ENST00000502802 C5P01031 1676 aa3.97□□□□□ -1.77
HMGB1P3-201ENST00000502802 MAP3K19Q56UN5 1328 aa3.96□□□□□ -1.77
HMGB1P3-201ENST00000502802 NCF1BA6NI72 391 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P3-201ENST00000502802 TMEM110-MUSTN1A8MSY1 372 aa3.96□□□□□ -1.78
HMGB1P3-201ENST00000502802 NCF1CA8MVU1 366 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P3-201ENST00000502802 DNAJB6O75190 326 aa3.96□□□□□ -1.78
HMGB1P3-201ENST00000502802 SERF1AO75920 110 aa3.96□□□□□ -1.78
HMGB1P3-201ENST00000502802 C1orf105O95561 183 aa3.96□□□□□ -1.78
HMGB1P3-201ENST00000502802 KLK3P07288 261 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P3-201ENST00000502802 ZNF24P17028 368 aa3.96□□□□□ -1.78
HMGB1P3-201ENST00000502802 ATP6V1B2P21281 511 aa3.96□□□□□ -1.78
HMGB1P3-201ENST00000502802 GATA2P23769 480 aaPredicted RBP3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms