RNA–Protein interactions for RNA: ENST00000502422.5

MATR3-202, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 2,250 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-202ENST00000502422 SLC13A4Q9UKG4 626 aa4.09□□□□□ -1.75
MATR3-202ENST00000502422 PCTPQ9UKL6 214 aa4.09□□□□□ -1.75
MATR3-202ENST00000502422 NPIPA1Q9UND3 350 aa4.09□□□□□ -1.75
MATR3-202ENST00000502422 ASF1AQ9Y294 204 aa4.09□□□□□ -1.75
MATR3-202ENST00000502422 ZNF835Q9Y2P0 537 aa4.09□□□□□ -1.75
MATR3-202ENST00000502422 YARS2Q9Y2Z4 477 aaKnown RBP4.09□□□□□ -1.75
MATR3-202ENST00000502422 CCL27Q9Y4X3 112 aa4.09□□□□□ -1.75
MATR3-202ENST00000502422 POLR3HQ9Y535 204 aaPredicted RBP4.09□□□□□ -1.75
MATR3-202ENST00000502422 INTS1Q8N201 2190 aaKnown RBP4.09□□□□□ -1.76
MATR3-202ENST00000502422 VPS13CQ709C8 3753 aa4.09□□□□□ -1.76
MATR3-202ENST00000502422 LOC105369274A0A096LPK9 316 aa4.09□□□□□ -1.76
MATR3-202ENST00000502422 SHISA3A0PJX4 238 aa4.09□□□□□ -1.76
MATR3-202ENST00000502422 PGPEP1LA6NFU8 196 aa4.09□□□□□ -1.76
MATR3-202ENST00000502422 DBX1A6NMT0 343 aa4.09□□□□□ -1.76
MATR3-202ENST00000502422 FAM90A27PA6NNH2 459 aa4.09□□□□□ -1.76
MATR3-202ENST00000502422 FFAR3O14843 346 aa4.09□□□□□ -1.76
MATR3-202ENST00000502422 GPR42O15529 346 aa4.09□□□□□ -1.76
MATR3-202ENST00000502422 TXNL1O43396 289 aa4.09□□□□□ -1.76
MATR3-202ENST00000502422 PRKRAO75569 313 aaKnown RBP4.09□□□□□ -1.76
MATR3-202ENST00000502422 TOXO94900 526 aa4.09□□□□□ -1.76
MATR3-202ENST00000502422 SLCO2B1O94956 709 aa4.09□□□□□ -1.76
MATR3-202ENST00000502422 AP2A2O94973 939 aa4.09□□□□□ -1.76
MATR3-202ENST00000502422 CCNDBP1O95273 360 aa4.09□□□□□ -1.76
MATR3-202ENST00000502422 CHRM5P08912 532 aaPredicted RBP4.09□□□□□ -1.76
MATR3-202ENST00000502422 FBP1P09467 338 aa4.09□□□□□ -1.76
MATR3-202ENST00000502422 ATP1B2P14415 290 aaPredicted RBP4.09□□□□□ -1.76
MATR3-202ENST00000502422 MUC1P15941 1255 aaPredicted RBP4.09□□□□□ -1.76
MATR3-202ENST00000502422 RAB3BP20337 219 aa4.09□□□□□ -1.76
MATR3-202ENST00000502422 RAB6AP20340 208 aa4.09□□□□□ -1.76
MATR3-202ENST00000502422 TNFSF4P23510 183 aa4.09□□□□□ -1.76
MATR3-202ENST00000502422 MAPK3P27361 379 aaPredicted RBP4.09□□□□□ -1.76
MATR3-202ENST00000502422 GABRA4P48169 554 aa4.09□□□□□ -1.76
MATR3-202ENST00000502422 MEOX1P50221 254 aa4.09□□□□□ -1.76
MATR3-202ENST00000502422 CAPZA1P52907 286 aa4.09□□□□□ -1.76
MATR3-202ENST00000502422 EMP2P54851 167 aa4.09□□□□□ -1.76
MATR3-202ENST00000502422 RPS7P62081 194 aaKnown RBP4.09□□□□□ -1.76
MATR3-202ENST00000502422 ERVK-25P63136 954 aa4.09□□□□□ -1.76
MATR3-202ENST00000502422 EEF1A2Q05639 463 aaKnown RBP4.09□□□□□ -1.76
MATR3-202ENST00000502422 PTGR1Q14914 329 aa4.09□□□□□ -1.76
MATR3-202ENST00000502422 RBMS2Q15434 407 aaKnown RBP4.09□□□□□ -1.76
MATR3-202ENST00000502422 FAM174BQ3ZCQ3 159 aa4.09□□□□□ -1.76
MATR3-202ENST00000502422 SPANXN4Q5MJ08 99 aa4.09□□□□□ -1.76
MATR3-202ENST00000502422 LRIF1Q5T3J3 769 aa4.09□□□□□ -1.76
MATR3-202ENST00000502422 YOD1Q5VVQ6 348 aaPredicted RBP4.09□□□□□ -1.76
MATR3-202ENST00000502422 LIPKQ5VXJ0 399 aa4.09□□□□□ -1.76
MATR3-202ENST00000502422 ZNF425Q6IV72 752 aa4.09□□□□□ -1.76
MATR3-202ENST00000502422 C11orf88Q6PI97 169 aa4.09□□□□□ -1.76
MATR3-202ENST00000502422 TMIGD1Q6UXZ0 262 aa4.09□□□□□ -1.76
MATR3-202ENST00000502422 BEND4Q6ZU67 534 aa4.09□□□□□ -1.76
MATR3-202ENST00000502422 KRT74Q7RTS7 529 aa4.09□□□□□ -1.76
MATR3-202ENST00000502422 WDR53Q7Z5U6 358 aaPredicted RBP4.09□□□□□ -1.76
MATR3-202ENST00000502422 LDLRAD3Q86YD5 345 aa4.09□□□□□ -1.76
MATR3-202ENST00000502422 CILP2Q8IUL8 1156 aa4.09□□□□□ -1.76
MATR3-202ENST00000502422 OR4N4Q8N0Y3 316 aa4.09□□□□□ -1.76
MATR3-202ENST00000502422 SLC5A8Q8N695 610 aa4.09□□□□□ -1.76
MATR3-202ENST00000502422 NANOGP1Q8N7R0 232 aa4.09□□□□□ -1.76
MATR3-202ENST00000502422 OR4C15Q8NGM1 316 aa4.09□□□□□ -1.76
MATR3-202ENST00000502422 OR9Q1Q8NGQ5 310 aa4.09□□□□□ -1.76
MATR3-202ENST00000502422 OR2T35Q8NGX2 323 aa4.09□□□□□ -1.76
MATR3-202ENST00000502422 OR52P1PQ8NH57 321 aa4.09□□□□□ -1.76
MATR3-202ENST00000502422 COQ8AQ8NI60 647 aa4.09□□□□□ -1.76
MATR3-202ENST00000502422 ASB5Q8WWX0 329 aa4.09□□□□□ -1.76
MATR3-202ENST00000502422 PSMF1Q92530 271 aa4.09□□□□□ -1.76
MATR3-202ENST00000502422 POP5Q969H6 163 aaKnown RBP4.09□□□□□ -1.76
MATR3-202ENST00000502422 TMEM68Q96MH6 324 aa4.09□□□□□ -1.76
MATR3-202ENST00000502422 ERMAPQ96PL5 475 aaPredicted RBP4.09□□□□□ -1.76
MATR3-202ENST00000502422 DDOQ99489 341 aa4.09□□□□□ -1.76
MATR3-202ENST00000502422 FEVQ99581 238 aa4.09□□□□□ -1.76
MATR3-202ENST00000502422 MNTQ99583 582 aa4.09□□□□□ -1.76
MATR3-202ENST00000502422 NIPSNAP1Q9BPW8 284 aa4.09□□□□□ -1.76
MATR3-202ENST00000502422 FICDQ9BVA6 458 aa4.09□□□□□ -1.76
MATR3-202ENST00000502422 MND1Q9BWT6 205 aa4.09□□□□□ -1.76
MATR3-202ENST00000502422 POLDIP3Q9BY77 421 aaKnown RBP4.09□□□□□ -1.76
MATR3-202ENST00000502422 RNF32Q9H0A6 362 aa4.09□□□□□ -1.76
MATR3-202ENST00000502422 REEP1Q9H902 201 aa4.09□□□□□ -1.76
MATR3-202ENST00000502422 NIT2Q9NQR4 276 aa4.09□□□□□ -1.76
MATR3-202ENST00000502422 KLHL1Q9NR64 748 aa4.09□□□□□ -1.76
MATR3-202ENST00000502422 NUDT15Q9NV35 164 aa4.09□□□□□ -1.76
MATR3-202ENST00000502422 DNAJC11Q9NVH1 559 aa4.09□□□□□ -1.76
MATR3-202ENST00000502422 SPHK1Q9NYA1 384 aa4.09□□□□□ -1.76
MATR3-202ENST00000502422 OR6C2Q9NZP2 312 aa4.09□□□□□ -1.76
MATR3-202ENST00000502422 PIPOXQ9P0Z9 390 aa4.09□□□□□ -1.76
MATR3-202ENST00000502422 GALPQ9UBC7 116 aa4.09□□□□□ -1.76
MATR3-202ENST00000502422 COMMD3Q9UBI1 195 aa4.09□□□□□ -1.76
MATR3-202ENST00000502422 RPS6KA6Q9UK32 745 aa4.09□□□□□ -1.76
MATR3-202ENST00000502422 SSR3Q9UNL2 185 aa4.09□□□□□ -1.76
MATR3-202ENST00000502422 SAMD4AQ9UPU9 718 aaKnown RBP4.09□□□□□ -1.76
MATR3-202ENST00000502422 SF3B6Q9Y3B4 125 aaKnown RBP4.09□□□□□ -1.76
MATR3-202ENST00000502422 RTTNQ86VV8 2226 aa4.09□□□□□ -1.76
MATR3-202ENST00000502422 ACANP16112 2415 aa4.08□□□□□ -1.76
MATR3-202ENST00000502422 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.08□□□□□ -1.76
MATR3-202ENST00000502422 TEX13CA0A0J9YWL9 993 aa4.08□□□□□ -1.76
MATR3-202ENST00000502422 LOC285095A0A1B0GVY8 99 aa4.08□□□□□ -1.76
MATR3-202ENST00000502422 MEX3AA1L020 520 aaKnown RBP4.08□□□□□ -1.76
MATR3-202ENST00000502422 OR2W5A6NFC9 320 aa4.08□□□□□ -1.76
MATR3-202ENST00000502422 ANKDD1BA6NHY2 528 aa4.08□□□□□ -1.76
MATR3-202ENST00000502422 VSTM2BA6NLU5 285 aa4.08□□□□□ -1.76
MATR3-202ENST00000502422 ZNF729A6NN14 1252 aaPredicted RBP4.08□□□□□ -1.76
MATR3-202ENST00000502422 TO15178 435 aa4.08□□□□□ -1.76
MATR3-202ENST00000502422 KLK8O60259 260 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms