RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 PRKCDQ05655 676 aa11.2□□□□□ -0.62
HSPG2-213ENST00000498495 RPL18Q07020 188 aaKnown RBP11.2□□□□□ -0.62
HSPG2-213ENST00000498495 LAPTM4AQ15012 233 aa11.2□□□□□ -0.62
HSPG2-213ENST00000498495 ZNF672Q499Z4 452 aaPredicted RBP11.2□□□□□ -0.62
HSPG2-213ENST00000498495 TBPL2Q6SJ96 375 aa11.2□□□□□ -0.62
HSPG2-213ENST00000498495 SLC22A25Q6T423 547 aa11.2□□□□□ -0.62
HSPG2-213ENST00000498495 SPNS3Q6ZMD2 512 aa11.2□□□□□ -0.62
HSPG2-213ENST00000498495 RINLQ6ZS11 566 aa11.2□□□□□ -0.62
HSPG2-213ENST00000498495 NRMQ8IXM6 262 aa11.2□□□□□ -0.62
HSPG2-213ENST00000498495 ARHGAP24Q8N264 748 aa11.2□□□□□ -0.62
HSPG2-213ENST00000498495 KBTBD8Q8NFY9 601 aa11.2□□□□□ -0.62
HSPG2-213ENST00000498495 MAGEE2Q8TD90 523 aaPredicted RBP11.2□□□□□ -0.62
HSPG2-213ENST00000498495 TMEM171Q8WVE6 324 aa11.2□□□□□ -0.62
HSPG2-213ENST00000498495 NEUROG1Q92886 237 aa11.2□□□□□ -0.62
HSPG2-213ENST00000498495 FBXW5Q969U6 566 aa11.2□□□□□ -0.62
HSPG2-213ENST00000498495 ZNF566Q969W8 418 aa11.2□□□□□ -0.62
HSPG2-213ENST00000498495 MCUR1Q96AQ8 359 aa11.2□□□□□ -0.62
HSPG2-213ENST00000498495 ZNF837Q96EG3 531 aaPredicted RBP11.2□□□□□ -0.62
HSPG2-213ENST00000498495 SLC25A44Q96H78 314 aaPredicted RBP11.2□□□□□ -0.62
HSPG2-213ENST00000498495 ULBP2Q9BZM5 246 aa11.2□□□□□ -0.62
HSPG2-213ENST00000498495 CXXC4Q9H2H0 198 aa11.2□□□□□ -0.62
HSPG2-213ENST00000498495 INIPQ9NRY2 104 aa11.2□□□□□ -0.62
HSPG2-213ENST00000498495 MAN2C1Q9NTJ4 1040 aa11.2□□□□□ -0.62
HSPG2-213ENST00000498495 NDUFAF4Q9P032 175 aa11.2□□□□□ -0.62
HSPG2-213ENST00000498495 POU2F3Q9UKI9 436 aa11.2□□□□□ -0.62
HSPG2-213ENST00000498495 V9GYQ6 96 aa11.2□□□□□ -0.62
HSPG2-213ENST00000498495 TEX15Q9BXT5 2789 aa11.2□□□□□ -0.62
HSPG2-213ENST00000498495 CSMD2Q7Z408 3487 aa11.19□□□□□ -0.62
HSPG2-213ENST00000498495 EFCAB9A8MZ26 197 aa11.19□□□□□ -0.62
HSPG2-213ENST00000498495 MCIDASD6RGH6 385 aa11.19□□□□□ -0.62
HSPG2-213ENST00000498495 hCG_2039718K7EN88 272 aa11.19□□□□□ -0.62
HSPG2-213ENST00000498495 ARPC2O15144 300 aa11.19□□□□□ -0.62
HSPG2-213ENST00000498495 PRSS23O95084 383 aa11.19□□□□□ -0.62
HSPG2-213ENST00000498495 T-ENOLP0DO92 83 aa11.19□□□□□ -0.62
HSPG2-213ENST00000498495 CAPZA2P47755 286 aa11.19□□□□□ -0.62
HSPG2-213ENST00000498495 MELKQ14680 651 aa11.19□□□□□ -0.62
HSPG2-213ENST00000498495 ALG10Q5BKT4 473 aa11.19□□□□□ -0.62
HSPG2-213ENST00000498495 MBOAT2Q6ZWT7 520 aa11.19□□□□□ -0.62
HSPG2-213ENST00000498495 TSEN54Q7Z6J9 526 aaKnown RBP11.19□□□□□ -0.62
HSPG2-213ENST00000498495 WDFY1Q8IWB7 410 aa11.19□□□□□ -0.62
HSPG2-213ENST00000498495 CCDC36Q8IYA8 594 aa11.19□□□□□ -0.62
HSPG2-213ENST00000498495 FAM86B1Q8N7N1 296 aa11.19□□□□□ -0.62
HSPG2-213ENST00000498495 MOSPD2Q8NHP6 518 aa11.19□□□□□ -0.62
HSPG2-213ENST00000498495 SMAP2Q8WU79 429 aaPredicted RBP11.19□□□□□ -0.62
HSPG2-213ENST00000498495 TMEM54Q969K7 222 aa11.19□□□□□ -0.62
HSPG2-213ENST00000498495 C7orf34Q96L11 122 aa11.19□□□□□ -0.62
HSPG2-213ENST00000498495 ANKRD19PQ9H560 264 aa11.19□□□□□ -0.62
HSPG2-213ENST00000498495 GLTPQ9NZD2 209 aa11.19□□□□□ -0.62
HSPG2-213ENST00000498495 LAMP3Q9UQV4 416 aa11.19□□□□□ -0.62
HSPG2-213ENST00000498495 PRR14LQ5THK1 2151 aa11.18□□□□□ -0.62
HSPG2-213ENST00000498495 ARPC4-TTLL3A0A0A6YYG9 625 aa11.18□□□□□ -0.62
HSPG2-213ENST00000498495 SHISA9B4DS77 424 aa11.18□□□□□ -0.62
HSPG2-213ENST00000498495 ARHGEF9O43307 516 aa11.18□□□□□ -0.62
HSPG2-213ENST00000498495 DIRAS1O95057 198 aa11.18□□□□□ -0.62
HSPG2-213ENST00000498495 IGHG1P01857 330 aa11.18□□□□□ -0.62
HSPG2-213ENST00000498495 TSPAN19P0C672 248 aa11.18□□□□□ -0.62
HSPG2-213ENST00000498495 MAKP20794 623 aa11.18□□□□□ -0.62
HSPG2-213ENST00000498495 SLC9A3P48764 834 aa11.18□□□□□ -0.62
HSPG2-213ENST00000498495 DAP3P51398 398 aaKnown RBP11.18□□□□□ -0.62
HSPG2-213ENST00000498495 CLRN1P58418 232 aa11.18□□□□□ -0.62
HSPG2-213ENST00000498495 SMIM11AP58511 58 aa11.18□□□□□ -0.62
HSPG2-213ENST00000498495 TUBA1BP68363 451 aa11.18□□□□□ -0.62
HSPG2-213ENST00000498495 TUBA4AP68366 448 aa11.18□□□□□ -0.62
HSPG2-213ENST00000498495 NKX6-1P78426 367 aaPredicted RBP11.18□□□□□ -0.62
HSPG2-213ENST00000498495 VLDLRP98155 873 aa11.18□□□□□ -0.62
HSPG2-213ENST00000498495 ANKDD1AQ495B1 522 aa11.18□□□□□ -0.62
HSPG2-213ENST00000498495 PODNL1Q6PEZ8 512 aa11.18□□□□□ -0.62
HSPG2-213ENST00000498495 TUBA1AQ71U36 451 aa11.18□□□□□ -0.62
HSPG2-213ENST00000498495 TRPM8Q7Z2W7 1104 aa11.18□□□□□ -0.62
HSPG2-213ENST00000498495 HDDC2Q7Z4H3 204 aa11.18□□□□□ -0.62
HSPG2-213ENST00000498495 OAFQ86UD1 273 aa11.18□□□□□ -0.62
HSPG2-213ENST00000498495 MEX3DQ86XN8 651 aaKnown RBP11.18□□□□□ -0.62
HSPG2-213ENST00000498495 OR51A7Q8NH64 312 aa11.18□□□□□ -0.62
HSPG2-213ENST00000498495 TNFRSF13CQ96RJ3 184 aa11.18□□□□□ -0.62
HSPG2-213ENST00000498495 KCNS3Q9BQ31 491 aa11.18□□□□□ -0.62
HSPG2-213ENST00000498495 C1orf21Q9H246 121 aa11.18□□□□□ -0.62
HSPG2-213ENST00000498495 NELFAQ9H3P2 528 aa11.18□□□□□ -0.62
HSPG2-213ENST00000498495 CXorf56Q9H5V9 222 aa11.18□□□□□ -0.62
HSPG2-213ENST00000498495 MOV10Q9HCE1 1003 aaKnown RBP11.18□□□□□ -0.62
HSPG2-213ENST00000498495 FAIMQ9NVQ4 179 aa11.18□□□□□ -0.62
HSPG2-213ENST00000498495 STX18Q9P2W9 335 aaKnown RBP11.18□□□□□ -0.62
HSPG2-213ENST00000498495 HIF3AQ9Y2N7 669 aa11.18□□□□□ -0.62
HSPG2-213ENST00000498495 CSMD1Q96PZ7 3565 aa11.17□□□□□ -0.62
HSPG2-213ENST00000498495 SPG11Q96JI7 2443 aa11.17□□□□□ -0.62
HSPG2-213ENST00000498495 A0A1W2PRQ8 180 aa11.17□□□□□ -0.62
HSPG2-213ENST00000498495 TMCC2O75069 709 aa11.17□□□□□ -0.62
HSPG2-213ENST00000498495 SEC14L2O76054 403 aa11.17□□□□□ -0.62
HSPG2-213ENST00000498495 FABP3P05413 133 aa11.17□□□□□ -0.62
HSPG2-213ENST00000498495 QDPRP09417 244 aa11.17□□□□□ -0.62
HSPG2-213ENST00000498495 DANCRP0C864 163 aa11.17□□□□□ -0.62
HSPG2-213ENST00000498495 PGA4P0DJD7 388 aa11.17□□□□□ -0.62
HSPG2-213ENST00000498495 PGA3P0DJD8 388 aa11.17□□□□□ -0.62
HSPG2-213ENST00000498495 CBR1P16152 277 aa11.17□□□□□ -0.62
HSPG2-213ENST00000498495 ACADSP16219 412 aa11.17□□□□□ -0.62
HSPG2-213ENST00000498495 CDH11P55287 796 aa11.17□□□□□ -0.62
HSPG2-213ENST00000498495 CTXN1P60606 82 aa11.17□□□□□ -0.62
HSPG2-213ENST00000498495 DGCR6Q14129 220 aa11.17□□□□□ -0.62
HSPG2-213ENST00000498495 FGD3Q5JSP0 725 aa11.17□□□□□ -0.62
HSPG2-213ENST00000498495 LRFN4Q6PJG9 635 aa11.17□□□□□ -0.62
HSPG2-213ENST00000498495 CYP2R1Q6VVX0 501 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms