RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 MMEL1Q495T6 779 aa11.89□□□□□ -0.51
CCDC58-207ENST00000498466 RPS26P11Q5JNZ5 115 aaPredicted RBP11.89□□□□□ -0.51
CCDC58-207ENST00000498466 FAM69AQ5T7M9 428 aa11.89□□□□□ -0.51
CCDC58-207ENST00000498466 SNX32Q86XE0 403 aa11.89□□□□□ -0.51
CCDC58-207ENST00000498466 TREML1Q86YW5 311 aa11.89□□□□□ -0.51
CCDC58-207ENST00000498466 SLC38A4Q969I6 547 aa11.89□□□□□ -0.51
CCDC58-207ENST00000498466 TAAR8Q969N4 342 aa11.89□□□□□ -0.51
CCDC58-207ENST00000498466 LRR1Q96L50 414 aa11.89□□□□□ -0.51
CCDC58-207ENST00000498466 TEX37Q96LM6 180 aa11.89□□□□□ -0.51
CCDC58-207ENST00000498466 DUX5Q96PT3 197 aa11.89□□□□□ -0.51
CCDC58-207ENST00000498466 OR52E6Q96RD3 313 aa11.89□□□□□ -0.51
CCDC58-207ENST00000498466 FOXB1Q99853 325 aa11.89□□□□□ -0.51
CCDC58-207ENST00000498466 SPATA9Q9BWV2 254 aa11.89□□□□□ -0.51
CCDC58-207ENST00000498466 ULBP2Q9BZM5 246 aa11.89□□□□□ -0.51
CCDC58-207ENST00000498466 DENND2DQ9H6A0 471 aaPredicted RBP11.89□□□□□ -0.51
CCDC58-207ENST00000498466 UNKLQ9H9P5 680 aaKnown RBP11.89□□□□□ -0.51
CCDC58-207ENST00000498466 ZNF224Q9NZL3 707 aa11.89□□□□□ -0.51
CCDC58-207ENST00000498466 RPS6KB2Q9UBS0 482 aa11.89□□□□□ -0.51
CCDC58-207ENST00000498466 FBXL3Q9UKT7 428 aa11.89□□□□□ -0.51
CCDC58-207ENST00000498466 CHST2Q9Y4C5 530 aa11.89□□□□□ -0.51
CCDC58-207ENST00000498466 IGHV1-69-2A0A0G2JMI3 117 aa11.88□□□□□ -0.51
CCDC58-207ENST00000498466 LOC102725191A0A1B0GVB3 256 aa11.88□□□□□ -0.51
CCDC58-207ENST00000498466 CLDN25C9JDP6 229 aa11.88□□□□□ -0.51
CCDC58-207ENST00000498466 FZD7O75084 574 aa11.88□□□□□ -0.51
CCDC58-207ENST00000498466 CLPTM1O96005 669 aa11.88□□□□□ -0.51
CCDC58-207ENST00000498466 MYZAPP0CAP1 466 aa11.88□□□□□ -0.51
CCDC58-207ENST00000498466 FAM157BP0CG42 384 aa11.88□□□□□ -0.51
CCDC58-207ENST00000498466 HLA-DOBP13765 273 aa11.88□□□□□ -0.51
CCDC58-207ENST00000498466 ETFAP13804 333 aa11.88□□□□□ -0.51
CCDC58-207ENST00000498466 LBPP18428 481 aa11.88□□□□□ -0.51
CCDC58-207ENST00000498466 CRATP43155 626 aa11.88□□□□□ -0.51
CCDC58-207ENST00000498466 CRYBB2P43320 205 aa11.88□□□□□ -0.51
CCDC58-207ENST00000498466 KLF3P57682 345 aaPredicted RBP11.88□□□□□ -0.51
CCDC58-207ENST00000498466 UFM1P61960 85 aa11.88□□□□□ -0.51
CCDC58-207ENST00000498466 CAMK2DQ13557 499 aa11.88□□□□□ -0.51
CCDC58-207ENST00000498466 ZNF771Q7L3S4 317 aaPredicted RBP11.88□□□□□ -0.51
CCDC58-207ENST00000498466 ZNF627Q7L945 461 aa11.88□□□□□ -0.51
CCDC58-207ENST00000498466 NUDCD3Q8IVD9 361 aa11.88□□□□□ -0.51
CCDC58-207ENST00000498466 SIGLECL1Q8N7X8 197 aa11.88□□□□□ -0.51
CCDC58-207ENST00000498466 OR6N1Q8NGY5 312 aa11.88□□□□□ -0.51
CCDC58-207ENST00000498466 SLC38A5Q8WUX1 472 aa11.88□□□□□ -0.51
CCDC58-207ENST00000498466 TIMD4Q96H15 378 aa11.88□□□□□ -0.51
CCDC58-207ENST00000498466 TSPAN32Q96QS1 320 aa11.88□□□□□ -0.51
CCDC58-207ENST00000498466 C1QTNF5Q9BXJ0 243 aa11.88□□□□□ -0.51
CCDC58-207ENST00000498466 OR51B6Q9H340 312 aa11.88□□□□□ -0.51
CCDC58-207ENST00000498466 DECR2Q9NUI1 292 aa11.88□□□□□ -0.51
CCDC58-207ENST00000498466 MED29Q9NX70 200 aa11.88□□□□□ -0.51
CCDC58-207ENST00000498466 OPN4Q9UHM6 478 aa11.88□□□□□ -0.51
CCDC58-207ENST00000498466 WIPI2Q9Y4P8 454 aa11.88□□□□□ -0.51
CCDC58-207ENST00000498466 CMYA5Q8N3K9 4069 aa11.87□□□□□ -0.51
CCDC58-207ENST00000498466 TRAV36DV7A0A075B6V5 113 aa11.87□□□□□ -0.51
CCDC58-207ENST00000498466 ZNF726A6NNF4 738 aa11.87□□□□□ -0.51
CCDC58-207ENST00000498466 MS4A18H0YCH9 400 aa11.87□□□□□ -0.51
CCDC58-207ENST00000498466 RFXANKO14593 260 aa11.87□□□□□ -0.51
CCDC58-207ENST00000498466 HPRP00739 348 aa11.87□□□□□ -0.51
CCDC58-207ENST00000498466 FSHBP01225 129 aa11.87□□□□□ -0.51
CCDC58-207ENST00000498466 SERPINA5P05154 406 aa11.87□□□□□ -0.51
CCDC58-207ENST00000498466 PATE4P0C8F1 98 aa11.87□□□□□ -0.51
CCDC58-207ENST00000498466 PRTN3P24158 256 aa11.87□□□□□ -0.51
CCDC58-207ENST00000498466 DSTNP60981 165 aa11.87□□□□□ -0.51
CCDC58-207ENST00000498466 LCN2P80188 198 aa11.87□□□□□ -0.51
CCDC58-207ENST00000498466 LRRC74AQ0VAA2 488 aa11.87□□□□□ -0.51
CCDC58-207ENST00000498466 HFEQ30201 348 aa11.87□□□□□ -0.51
CCDC58-207ENST00000498466 MS4A18Q3C1V0 323 aa11.87□□□□□ -0.51
CCDC58-207ENST00000498466 C5orf46Q6UWT4 87 aa11.87□□□□□ -0.51
CCDC58-207ENST00000498466 C6orf89Q6UWU4 347 aa11.87□□□□□ -0.51
CCDC58-207ENST00000498466 USP51Q70EK9 711 aa11.87□□□□□ -0.51
CCDC58-207ENST00000498466 NET1Q7Z628 596 aaPredicted RBP11.87□□□□□ -0.51
CCDC58-207ENST00000498466 RETREG3Q86VR2 466 aa11.87□□□□□ -0.51
CCDC58-207ENST00000498466 ZNF584Q8IVC4 421 aa11.87□□□□□ -0.51
CCDC58-207ENST00000498466 MIER2Q8N344 545 aa11.87□□□□□ -0.51
CCDC58-207ENST00000498466 ADPRHL1Q8NDY3 354 aa11.87□□□□□ -0.51
CCDC58-207ENST00000498466 SYNPRQ8TBG9 265 aa11.87□□□□□ -0.51
CCDC58-207ENST00000498466 RAB1CQ92928 201 aa11.87□□□□□ -0.51
CCDC58-207ENST00000498466 DVL3Q92997 716 aaPredicted RBP11.87□□□□□ -0.51
CCDC58-207ENST00000498466 TMEM19Q96HH6 336 aa11.87□□□□□ -0.51
CCDC58-207ENST00000498466 PKNOX2Q96KN3 472 aa11.87□□□□□ -0.51
CCDC58-207ENST00000498466 GAL3ST1Q99999 423 aa11.87□□□□□ -0.51
CCDC58-207ENST00000498466 NUF2Q9BZD4 464 aa11.87□□□□□ -0.51
CCDC58-207ENST00000498466 SLCO1C1Q9NYB5 712 aa11.87□□□□□ -0.51
CCDC58-207ENST00000498466 IFT52Q9Y366 437 aa11.87□□□□□ -0.51
CCDC58-207ENST00000498466 A0A087WUJ7 227 aa11.86□□□□□ -0.51
CCDC58-207ENST00000498466 A0A0G2JPF8 293 aa11.86□□□□□ -0.51
CCDC58-207ENST00000498466 SLC22A23A1A5C7 686 aa11.86□□□□□ -0.51
CCDC58-207ENST00000498466 WDR91A4D1P6 747 aa11.86□□□□□ -0.51
CCDC58-207ENST00000498466 TMEM247A6NEH6 219 aa11.86□□□□□ -0.51
CCDC58-207ENST00000498466 DNAJC9-AS1A6NH13 148 aa11.86□□□□□ -0.51
CCDC58-207ENST00000498466 HNRNPCL2B2RXH8 293 aa11.86□□□□□ -0.51
CCDC58-207ENST00000498466 HNRNPCL3B7ZW38 293 aa11.86□□□□□ -0.51
CCDC58-207ENST00000498466 HNRNPCL1O60812 293 aaKnown RBP11.86□□□□□ -0.51
CCDC58-207ENST00000498466 LCKP06239 509 aa11.86□□□□□ -0.51
CCDC58-207ENST00000498466 HNRNPCL4P0DMR1 293 aa11.86□□□□□ -0.51
CCDC58-207ENST00000498466 ZFP36P26651 326 aaKnown RBP11.86□□□□□ -0.51
CCDC58-207ENST00000498466 IL12AP29459 219 aa11.86□□□□□ -0.51
CCDC58-207ENST00000498466 ABCE1P61221 599 aaKnown RBP11.86□□□□□ -0.51
CCDC58-207ENST00000498466 RBBP4Q09028 425 aa11.86□□□□□ -0.51
CCDC58-207ENST00000498466 TSTQ16762 297 aaKnown RBP11.86□□□□□ -0.51
CCDC58-207ENST00000498466 WDFY1Q8IWB7 410 aa11.86□□□□□ -0.51
CCDC58-207ENST00000498466 SLC30A7Q8NEW0 376 aa11.86□□□□□ -0.51
CCDC58-207ENST00000498466 LRRC58Q96CX6 371 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms