RNA–Protein interactions for RNA: ENST00000497638.2

VPS45-210, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,135 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-210ENST00000497638 FAM120BQ96EK7 910 aaKnown RBP6.44□□□□□ -1.38
VPS45-210ENST00000497638 CITED1Q99966 193 aa6.44□□□□□ -1.38
VPS45-210ENST00000497638 CCDC106Q9BWC9 280 aa6.44□□□□□ -1.38
VPS45-210ENST00000497638 SF3B5Q9BWJ5 86 aaKnown RBP6.44□□□□□ -1.38
VPS45-210ENST00000497638 RSPO3Q9BXY4 272 aaPredicted RBP6.44□□□□□ -1.38
VPS45-210ENST00000497638 MRPL37Q9BZE1 423 aaKnown RBP6.44□□□□□ -1.38
VPS45-210ENST00000497638 NMUR2Q9GZQ4 415 aa6.44□□□□□ -1.38
VPS45-210ENST00000497638 NOX3Q9HBY0 568 aa6.44□□□□□ -1.38
VPS45-210ENST00000497638 CTPS2Q9NRF8 586 aa6.44□□□□□ -1.38
VPS45-210ENST00000497638 ZCCHC3Q9NUD5 404 aaKnown RBP6.44□□□□□ -1.38
VPS45-210ENST00000497638 PLEK2Q9NYT0 353 aa6.44□□□□□ -1.38
VPS45-210ENST00000497638 NUP50Q9UKX7 468 aa6.44□□□□□ -1.38
VPS45-210ENST00000497638 ZNF346Q9UL40 294 aaKnown RBP6.44□□□□□ -1.38
VPS45-210ENST00000497638 SNX24Q9Y343 169 aa6.44□□□□□ -1.38
VPS45-210ENST00000497638 ARHGAP32A7KAX9 2087 aa6.44□□□□□ -1.38
VPS45-210ENST00000497638 TENM3Q9P273 2699 aa6.43□□□□□ -1.38
VPS45-210ENST00000497638 PPIAL4EA0A075B759 164 aa6.43□□□□□ -1.38
VPS45-210ENST00000497638 PPIAL4CA0A0B4J2A2 164 aa6.43□□□□□ -1.38
VPS45-210ENST00000497638 PPIAL4DF5H284 164 aa6.43□□□□□ -1.38
VPS45-210ENST00000497638 NR5A2O00482 541 aa6.43□□□□□ -1.38
VPS45-210ENST00000497638 RSL1D1O76021 490 aaKnown RBP6.43□□□□□ -1.38
VPS45-210ENST00000497638 SUPT7LO94864 414 aa6.43□□□□□ -1.38
VPS45-210ENST00000497638 GPANK1O95872 356 aa6.43□□□□□ -1.38
VPS45-210ENST00000497638 CSTAP01040 98 aa6.43□□□□□ -1.38
VPS45-210ENST00000497638 PPIAL4FP0DN26 164 aa6.43□□□□□ -1.38
VPS45-210ENST00000497638 TCP1P17987 556 aaKnown RBP6.43□□□□□ -1.38
VPS45-210ENST00000497638 TCN1P20061 433 aaPredicted RBP6.43□□□□□ -1.38
VPS45-210ENST00000497638 MAGEA12P43365 314 aa6.43□□□□□ -1.38
VPS45-210ENST00000497638 ATP4BP51164 291 aa6.43□□□□□ -1.38
VPS45-210ENST00000497638 RPS23P62266 143 aaKnown RBP6.43□□□□□ -1.38
VPS45-210ENST00000497638 GUCY2DQ02846 1103 aa6.43□□□□□ -1.38
VPS45-210ENST00000497638 LCP2Q13094 533 aa6.43□□□□□ -1.38
VPS45-210ENST00000497638 SLC9A3R2Q15599 337 aa6.43□□□□□ -1.38
VPS45-210ENST00000497638 IMPG1Q17R60 797 aa6.43□□□□□ -1.38
VPS45-210ENST00000497638 PDZK1Q5T2W1 519 aa6.43□□□□□ -1.38
VPS45-210ENST00000497638 NOXRED1Q6NXP6 359 aa6.43□□□□□ -1.38
VPS45-210ENST00000497638 EIF3MQ7L2H7 374 aaKnown RBP6.43□□□□□ -1.38
VPS45-210ENST00000497638 MYPOPQ86VE0 399 aaPredicted RBP6.43□□□□□ -1.38
VPS45-210ENST00000497638 GAS2L3Q86XJ1 694 aa6.43□□□□□ -1.38
VPS45-210ENST00000497638 PQLC1Q8N2U9 271 aa6.43□□□□□ -1.38
VPS45-210ENST00000497638 ZIC4Q8N9L1 334 aa6.43□□□□□ -1.38
VPS45-210ENST00000497638 OR9K2Q8NGE7 335 aa6.43□□□□□ -1.38
VPS45-210ENST00000497638 OR4F5Q8NH21 305 aa6.43□□□□□ -1.38
VPS45-210ENST00000497638 ADAMTS15Q8TE58 950 aa6.43□□□□□ -1.38
VPS45-210ENST00000497638 AURKBQ96GD4 344 aaPredicted RBP6.43□□□□□ -1.38
VPS45-210ENST00000497638 METTL2AQ96IZ6 378 aaKnown RBP6.43□□□□□ -1.38
VPS45-210ENST00000497638 ALKBH3Q96Q83 286 aaPredicted RBP6.43□□□□□ -1.38
VPS45-210ENST00000497638 RBM4BQ9BQ04 359 aaKnown RBP6.43□□□□□ -1.38
VPS45-210ENST00000497638 ACTRT3Q9BYD9 372 aa6.43□□□□□ -1.38
VPS45-210ENST00000497638 OR11A1Q9GZK7 315 aa6.43□□□□□ -1.38
VPS45-210ENST00000497638 BEX1Q9HBH7 125 aa6.43□□□□□ -1.38
VPS45-210ENST00000497638 ZNF69Q9UC07 566 aa6.43□□□□□ -1.38
VPS45-210ENST00000497638 MID2Q9UJV3 735 aa6.43□□□□□ -1.38
VPS45-210ENST00000497638 PCDHGB4Q9UN71 923 aa6.43□□□□□ -1.38
VPS45-210ENST00000497638 FAF1Q9UNN5 650 aaPredicted RBP6.43□□□□□ -1.38
VPS45-210ENST00000497638 PPP2R2CQ9Y2T4 447 aa6.43□□□□□ -1.38
VPS45-210ENST00000497638 NUP214P35658 2090 aaPredicted RBP6.42□□□□□ -1.38
VPS45-210ENST00000497638 CCDC188H7C350 402 aa6.42□□□□□ -1.38
VPS45-210ENST00000497638 ZNF208O43345 1280 aa6.42□□□□□ -1.38
VPS45-210ENST00000497638 SKAP2O75563 359 aaPredicted RBP6.42□□□□□ -1.38
VPS45-210ENST00000497638 UBTFL6P0CB48 400 aaPredicted RBP6.42□□□□□ -1.38
VPS45-210ENST00000497638 GLRXP35754 106 aa6.42□□□□□ -1.38
VPS45-210ENST00000497638 ALDH3B1P43353 468 aa6.42□□□□□ -1.38
VPS45-210ENST00000497638 HTR3AP46098 478 aa6.42□□□□□ -1.38
VPS45-210ENST00000497638 MTNR1AP48039 350 aa6.42□□□□□ -1.38
VPS45-210ENST00000497638 MAP2K6P52564 334 aa6.42□□□□□ -1.38
VPS45-210ENST00000497638 SRSF4Q08170 494 aaKnown RBP6.42□□□□□ -1.38
VPS45-210ENST00000497638 NPRL3Q12980 569 aa6.42□□□□□ -1.38
VPS45-210ENST00000497638 PDE7AQ13946 482 aa6.42□□□□□ -1.38
VPS45-210ENST00000497638 ZNF141Q15928 474 aa6.42□□□□□ -1.38
VPS45-210ENST00000497638 UAP1Q16222 522 aaPredicted RBP6.42□□□□□ -1.38
VPS45-210ENST00000497638 UNC50Q53HI1 259 aa6.42□□□□□ -1.38
VPS45-210ENST00000497638 ZNF678Q5SXM1 525 aa6.42□□□□□ -1.38
VPS45-210ENST00000497638 AVPI1Q5T686 147 aa6.42□□□□□ -1.38
VPS45-210ENST00000497638 OLFML2AQ68BL7 652 aa6.42□□□□□ -1.38
VPS45-210ENST00000497638 KRT80Q6KB66 452 aa6.42□□□□□ -1.38
VPS45-210ENST00000497638 ANKRD26P1Q6NSI1 321 aa6.42□□□□□ -1.38
VPS45-210ENST00000497638 C16orf87Q6PH81 154 aa6.42□□□□□ -1.38
VPS45-210ENST00000497638 CCDC36Q8IYA8 594 aa6.42□□□□□ -1.38
VPS45-210ENST00000497638 SLC35F6Q8N357 371 aa6.42□□□□□ -1.38
VPS45-210ENST00000497638 CLRN3Q8NCR9 226 aa6.42□□□□□ -1.38
VPS45-210ENST00000497638 FAM71CQ8NEG0 241 aa6.42□□□□□ -1.38
VPS45-210ENST00000497638 ZNF563Q8TA94 476 aa6.42□□□□□ -1.38
VPS45-210ENST00000497638 DCAKDQ8WVC6 231 aa6.42□□□□□ -1.38
VPS45-210ENST00000497638 OIT3Q8WWZ8 545 aa6.42□□□□□ -1.38
VPS45-210ENST00000497638 PMM1Q92871 262 aa6.42□□□□□ -1.38
VPS45-210ENST00000497638 RAB8BQ92930 207 aa6.42□□□□□ -1.38
VPS45-210ENST00000497638 DDIT4LQ96D03 193 aa6.42□□□□□ -1.38
VPS45-210ENST00000497638 DNAJA3Q96EY1 480 aa6.42□□□□□ -1.38
VPS45-210ENST00000497638 TIMD4Q96H15 378 aa6.42□□□□□ -1.38
VPS45-210ENST00000497638 EGLN2Q96KS0 407 aa6.42□□□□□ -1.38
VPS45-210ENST00000497638 ZNF48Q96MX3 618 aaPredicted RBP6.42□□□□□ -1.38
VPS45-210ENST00000497638 ZNF385AQ96PM9 386 aaKnown RBP6.42□□□□□ -1.38
VPS45-210ENST00000497638 KCNA7Q96RP8 456 aa6.42□□□□□ -1.38
VPS45-210ENST00000497638 CCT7Q99832 543 aa6.42□□□□□ -1.38
VPS45-210ENST00000497638 REEP4Q9H6H4 257 aa6.42□□□□□ -1.38
VPS45-210ENST00000497638 IFT22Q9H7X7 185 aa6.42□□□□□ -1.38
VPS45-210ENST00000497638 CRLF2Q9HC73 371 aa6.42□□□□□ -1.38
VPS45-210ENST00000497638 SIRT3Q9NTG7 399 aaPredicted RBP6.42□□□□□ -1.38
VPS45-210ENST00000497638 SH3BP4Q9P0V3 963 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms