RNA–Protein interactions for RNA: ENST00000496447.5

PTPRF-215, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 5,887 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-215ENST00000496447 SLC7A6Q92536 515 aa12.12□□□□□ -0.47
PTPRF-215ENST00000496447 TAAR8Q969N4 342 aa12.12□□□□□ -0.47
PTPRF-215ENST00000496447 RBFOX1Q9NWB1 397 aaKnown RBP12.12□□□□□ -0.47
PTPRF-215ENST00000496447 IDSB3KWA1 339 aa12.12□□□□□ -0.47
PTPRF-215ENST00000496447 PLPP1O14494 284 aa12.12□□□□□ -0.47
PTPRF-215ENST00000496447 C1QBP02746 253 aa12.12□□□□□ -0.47
PTPRF-215ENST00000496447 ZNF136P52737 540 aa12.12□□□□□ -0.47
PTPRF-215ENST00000496447 DLX5P56178 289 aa12.12□□□□□ -0.47
PTPRF-215ENST00000496447 MCCD1P59942 119 aaPredicted RBP12.12□□□□□ -0.47
PTPRF-215ENST00000496447 MSMO1Q15800 293 aa12.12□□□□□ -0.47
PTPRF-215ENST00000496447 DPY19L2P2Q6ZN68 376 aa12.12□□□□□ -0.47
PTPRF-215ENST00000496447 ETFBKMTQ8IXQ9 262 aa12.12□□□□□ -0.47
PTPRF-215ENST00000496447 LRRC56Q8IYG6 542 aaPredicted RBP12.12□□□□□ -0.47
PTPRF-215ENST00000496447 LILRA2Q8N149 483 aa12.12□□□□□ -0.47
PTPRF-215ENST00000496447 OR4D6Q8NGJ1 314 aa12.12□□□□□ -0.47
PTPRF-215ENST00000496447 TMEM255BQ8WV15 326 aa12.12□□□□□ -0.47
PTPRF-215ENST00000496447 FGF14Q92915 247 aa12.12□□□□□ -0.47
PTPRF-215ENST00000496447 DEFB127Q9H1M4 99 aa12.12□□□□□ -0.47
PTPRF-215ENST00000496447 P2RY12Q9H244 342 aa12.12□□□□□ -0.47
PTPRF-215ENST00000496447 SIDT1Q9NXL6 827 aaKnown RBP12.12□□□□□ -0.47
PTPRF-215ENST00000496447 NPFFR2Q9Y5X5 522 aa12.12□□□□□ -0.47
PTPRF-215ENST00000496447 GON4LQ3T8J9 2241 aa12.12□□□□□ -0.47
PTPRF-215ENST00000496447 LRRC30A6NM36 301 aa12.11□□□□□ -0.47
PTPRF-215ENST00000496447 NRG2O14511 850 aaPredicted RBP12.11□□□□□ -0.47
PTPRF-215ENST00000496447 BET1O15155 118 aa12.11□□□□□ -0.47
PTPRF-215ENST00000496447 HPGDSO60760 199 aa12.11□□□□□ -0.47
PTPRF-215ENST00000496447 LIPCP11150 499 aa12.11□□□□□ -0.47
PTPRF-215ENST00000496447 BDKRB2P30411 391 aa12.11□□□□□ -0.47
PTPRF-215ENST00000496447 CATR1Q13166 79 aa12.11□□□□□ -0.47
PTPRF-215ENST00000496447 NHSL2Q5HYW2 709 aa12.11□□□□□ -0.47
PTPRF-215ENST00000496447 GDF7Q7Z4P5 450 aa12.11□□□□□ -0.47
PTPRF-215ENST00000496447 OR1N1Q8NGS0 311 aa12.11□□□□□ -0.47
PTPRF-215ENST00000496447 SLC25A43Q8WUT9 341 aaPredicted RBP12.11□□□□□ -0.47
PTPRF-215ENST00000496447 C10orf90Q96M02 699 aa12.11□□□□□ -0.47
PTPRF-215ENST00000496447 STACQ99469 402 aa12.11□□□□□ -0.47
PTPRF-215ENST00000496447 HRH3Q9Y5N1 445 aa12.11□□□□□ -0.47
PTPRF-215ENST00000496447 PLRG1O43660 514 aaKnown RBP12.11□□□□□ -0.47
PTPRF-215ENST00000496447 EIF4E2O60573 245 aaKnown RBP12.11□□□□□ -0.47
PTPRF-215ENST00000496447 NXPH2O95156 264 aa12.11□□□□□ -0.47
PTPRF-215ENST00000496447 LALBAP00709 142 aa12.11□□□□□ -0.47
PTPRF-215ENST00000496447 F2RL1P55085 397 aa12.11□□□□□ -0.47
PTPRF-215ENST00000496447 GPR85P60893 370 aa12.11□□□□□ -0.47
PTPRF-215ENST00000496447 SLC16A11Q8NCK7 471 aa12.11□□□□□ -0.47
PTPRF-215ENST00000496447 MS4A6EQ96DS6 147 aa12.11□□□□□ -0.47
PTPRF-215ENST00000496447 LTB4R2Q9NPC1 389 aa12.11□□□□□ -0.47
PTPRF-215ENST00000496447 ZNF355PQ9NSJ1 428 aa12.11□□□□□ -0.47
PTPRF-215ENST00000496447 PHIPQ8WWQ0 1821 aa12.11□□□□□ -0.47
PTPRF-215ENST00000496447 OR2T7P0C7T2 308 aa12.11□□□□□ -0.47
PTPRF-215ENST00000496447 CAV3P56539 151 aa12.11□□□□□ -0.47
PTPRF-215ENST00000496447 TAS2R46P59540 309 aa12.11□□□□□ -0.47
PTPRF-215ENST00000496447 TAS2R19P59542 299 aa12.11□□□□□ -0.47
PTPRF-215ENST00000496447 IL13RA1P78552 427 aa12.11□□□□□ -0.47
PTPRF-215ENST00000496447 PAN3Q58A45 887 aaKnown RBP12.11□□□□□ -0.47
PTPRF-215ENST00000496447 OR2G6Q5TZ20 316 aa12.11□□□□□ -0.47
PTPRF-215ENST00000496447 GRINAQ7Z429 371 aa12.11□□□□□ -0.47
PTPRF-215ENST00000496447 OR56B1Q8NGI3 324 aa12.11□□□□□ -0.47
PTPRF-215ENST00000496447 OR2T27Q8NH04 317 aa12.11□□□□□ -0.47
PTPRF-215ENST00000496447 CENPOQ9BU64 300 aa12.11□□□□□ -0.47
PTPRF-215ENST00000496447 GAPDHSO14556 408 aaPredicted RBP12.11□□□□□ -0.47
PTPRF-215ENST00000496447 ADAM10O14672 748 aa12.11□□□□□ -0.47
PTPRF-215ENST00000496447 MAKP20794 623 aa12.11□□□□□ -0.47
PTPRF-215ENST00000496447 C21orf33P30042 268 aaPredicted RBP12.11□□□□□ -0.47
PTPRF-215ENST00000496447 LGALS4P56470 323 aa12.11□□□□□ -0.47
PTPRF-215ENST00000496447 ST8SIA4Q92187 359 aa12.11□□□□□ -0.47
PTPRF-215ENST00000496447 MIB2Q96AX9 1013 aa12.11□□□□□ -0.47
PTPRF-215ENST00000496447 MFRPQ9BY79 579 aa12.11□□□□□ -0.47
PTPRF-215ENST00000496447 ACKR4Q9NPB9 350 aa12.11□□□□□ -0.47
PTPRF-215ENST00000496447 DAPP1Q9UN19 280 aa12.11□□□□□ -0.47
PTPRF-215ENST00000496447 USP22Q9UPT9 525 aa12.11□□□□□ -0.47
PTPRF-215ENST00000496447 PRRC2BQ5JSZ5 2229 aaKnown RBP12.11□□□□□ -0.47
PTPRF-215ENST00000496447 CDHR4A6H8M9 788 aa12.11□□□□□ -0.47
PTPRF-215ENST00000496447 GAB1Q13480 694 aa12.11□□□□□ -0.47
PTPRF-215ENST00000496447 DEFB109BQ30KR1 87 aa12.11□□□□□ -0.47
PTPRF-215ENST00000496447 YRDCQ86U90 279 aaKnown RBP12.11□□□□□ -0.47
PTPRF-215ENST00000496447 DMBX1Q8NFW5 382 aa12.11□□□□□ -0.47
PTPRF-215ENST00000496447 LINC01599Q8WXQ3 324 aa12.11□□□□□ -0.47
PTPRF-215ENST00000496447 BOD1Q96IK1 185 aa12.11□□□□□ -0.47
PTPRF-215ENST00000496447 OCSTAMPQ9BR26 566 aa12.11□□□□□ -0.47
PTPRF-215ENST00000496447 MENTQ9BUN1 341 aa12.11□□□□□ -0.47
PTPRF-215ENST00000496447 B3GAT1Q9P2W7 334 aa12.11□□□□□ -0.47
PTPRF-215ENST00000496447 KLF13Q9Y2Y9 288 aaPredicted RBP12.11□□□□□ -0.47
PTPRF-215ENST00000496447 MYH15Q9Y2K3 1946 aa12.1□□□□□ -0.47
PTPRF-215ENST00000496447 GABRPO00591 440 aa12.1□□□□□ -0.47
PTPRF-215ENST00000496447 TOR1AO14656 332 aa12.1□□□□□ -0.47
PTPRF-215ENST00000496447 FABP7O15540 132 aa12.1□□□□□ -0.47
PTPRF-215ENST00000496447 SLC19A1P41440 591 aa12.1□□□□□ -0.47
PTPRF-215ENST00000496447 VEGFCP49767 419 aa12.1□□□□□ -0.47
PTPRF-215ENST00000496447 AADACL3Q5VUY0 350 aa12.1□□□□□ -0.47
PTPRF-215ENST00000496447 Q6ZPB1 254 aaPredicted RBP12.1□□□□□ -0.47
PTPRF-215ENST00000496447 TMEM59Q9BXS4 323 aa12.1□□□□□ -0.47
PTPRF-215ENST00000496447 NIT2Q9NQR4 276 aa12.1□□□□□ -0.47
PTPRF-215ENST00000496447 WBP1LQ9NX94 342 aa12.1□□□□□ -0.47
PTPRF-215ENST00000496447 TOGARAM1Q9Y4F4 1720 aa12.1□□□□□ -0.47
PTPRF-215ENST00000496447 A6NIN4 97 aa12.1□□□□□ -0.47
PTPRF-215ENST00000496447 BAK1Q16611 211 aa12.1□□□□□ -0.47
PTPRF-215ENST00000496447 H1FNTQ75WM6 255 aaPredicted RBP12.1□□□□□ -0.47
PTPRF-215ENST00000496447 S100A7AQ86SG5 101 aa12.1□□□□□ -0.47
PTPRF-215ENST00000496447 CTDSP2O14595 271 aa12.1□□□□□ -0.47
PTPRF-215ENST00000496447 ALPLP05186 524 aa12.1□□□□□ -0.47
PTPRF-215ENST00000496447 ALDH3B1P43353 468 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms