RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 CCDC80Q76M96 950 aa12.37□□□□□ -0.43
VTI1A-209ENST00000496445 ZNF627Q7L945 461 aa12.37□□□□□ -0.43
VTI1A-209ENST00000496445 PXKQ7Z7A4 578 aa12.37□□□□□ -0.43
VTI1A-209ENST00000496445 CALHM3Q86XJ0 350 aa12.37□□□□□ -0.43
VTI1A-209ENST00000496445 C10orf53Q8N6V4 93 aa12.37□□□□□ -0.43
VTI1A-209ENST00000496445 ANKS4BQ8N8V4 417 aa12.37□□□□□ -0.43
VTI1A-209ENST00000496445 OR4F15Q8NGB8 312 aa12.37□□□□□ -0.43
VTI1A-209ENST00000496445 LRR1Q96L50 414 aa12.37□□□□□ -0.43
VTI1A-209ENST00000496445 ZNF75AQ96N20 296 aa12.37□□□□□ -0.43
VTI1A-209ENST00000496445 TNFRSF13CQ96RJ3 184 aa12.37□□□□□ -0.43
VTI1A-209ENST00000496445 PLK3Q9H4B4 646 aa12.37□□□□□ -0.43
VTI1A-209ENST00000496445 NANOGQ9H9S0 305 aa12.37□□□□□ -0.43
VTI1A-209ENST00000496445 YAE1D1Q9NRH1 226 aa12.37□□□□□ -0.43
VTI1A-209ENST00000496445 B3GNT2Q9NY97 397 aa12.37□□□□□ -0.43
VTI1A-209ENST00000496445 SLC7A7Q9UM01 511 aa12.37□□□□□ -0.43
VTI1A-209ENST00000496445 USP22Q9UPT9 525 aa12.37□□□□□ -0.43
VTI1A-209ENST00000496445 MALRD1Q5VYJ5 2156 aa12.36□□□□□ -0.43
VTI1A-209ENST00000496445 RTTNQ86VV8 2226 aa12.36□□□□□ -0.43
VTI1A-209ENST00000496445 VWC2LB2RUY7 222 aa12.36□□□□□ -0.43
VTI1A-209ENST00000496445 B9A039 149 aa12.36□□□□□ -0.43
VTI1A-209ENST00000496445 C11orf98E9PRG8 122 aa12.36□□□□□ -0.43
VTI1A-209ENST00000496445 KPNA4O00629 521 aaPredicted RBP12.36□□□□□ -0.43
VTI1A-209ENST00000496445 CH25HO95992 272 aa12.36□□□□□ -0.43
VTI1A-209ENST00000496445 HLA-HP01893 362 aa12.36□□□□□ -0.43
VTI1A-209ENST00000496445 ADORA3P0DMS8 318 aa12.36□□□□□ -0.43
VTI1A-209ENST00000496445 B4GALT1P15291 398 aa12.36□□□□□ -0.43
VTI1A-209ENST00000496445 AHCYP23526 432 aa12.36□□□□□ -0.43
VTI1A-209ENST00000496445 THBS4P35443 961 aa12.36□□□□□ -0.43
VTI1A-209ENST00000496445 ARR3P36575 388 aa12.36□□□□□ -0.43
VTI1A-209ENST00000496445 CAPZA2P47755 286 aa12.36□□□□□ -0.43
VTI1A-209ENST00000496445 BIDP55957 195 aa12.36□□□□□ -0.43
VTI1A-209ENST00000496445 VLDLRP98155 873 aa12.36□□□□□ -0.43
VTI1A-209ENST00000496445 SF3A3Q12874 501 aaKnown RBP eCLIP12.36□□□□□ -0.43
VTI1A-209ENST00000496445 REP15Q6BDI9 236 aa12.36□□□□□ -0.43
VTI1A-209ENST00000496445 LRRC17Q8N6Y2 441 aa12.36□□□□□ -0.43
VTI1A-209ENST00000496445 PRSS27Q9BQR3 290 aa12.36□□□□□ -0.43
VTI1A-209ENST00000496445 ULBP2Q9BZM5 246 aa12.36□□□□□ -0.43
VTI1A-209ENST00000496445 ZNF442Q9H7R0 627 aa12.36□□□□□ -0.43
VTI1A-209ENST00000496445 FGFR1OP2Q9NVK5 253 aa12.36□□□□□ -0.43
VTI1A-209ENST00000496445 TAS2R5Q9NYW4 299 aa12.36□□□□□ -0.43
VTI1A-209ENST00000496445 FKBP7Q9Y680 259 aa12.36□□□□□ -0.43
VTI1A-209ENST00000496445 TRAPPC13A5PLN9 417 aa12.35□□□□□ -0.43
VTI1A-209ENST00000496445 IFNGR1P15260 489 aa12.35□□□□□ -0.43
VTI1A-209ENST00000496445 ZNF14P17017 642 aaPredicted RBP12.35□□□□□ -0.43
VTI1A-209ENST00000496445 ZNF16P17020 682 aaPredicted RBP12.35□□□□□ -0.43
VTI1A-209ENST00000496445 TNFRSF1BP20333 461 aa12.35□□□□□ -0.43
VTI1A-209ENST00000496445 PPOXP50336 477 aa12.35□□□□□ -0.43
VTI1A-209ENST00000496445 MELKQ14680 651 aa12.35□□□□□ -0.43
VTI1A-209ENST00000496445 MSMPQ1L6U9 139 aa12.35□□□□□ -0.43
VTI1A-209ENST00000496445 COQ5Q5HYK3 327 aa12.35□□□□□ -0.43
VTI1A-209ENST00000496445 INTS11Q5TA45 600 aaKnown RBP12.35□□□□□ -0.43
VTI1A-209ENST00000496445 ZNF813Q6ZN06 617 aa12.35□□□□□ -0.43
VTI1A-209ENST00000496445 SLC46A3Q7Z3Q1 461 aa12.35□□□□□ -0.43
VTI1A-209ENST00000496445 CCDC36Q8IYA8 594 aa12.35□□□□□ -0.43
VTI1A-209ENST00000496445 OR8J3Q8NGG0 315 aa12.35□□□□□ -0.43
VTI1A-209ENST00000496445 OR6N1Q8NGY5 312 aa12.35□□□□□ -0.43
VTI1A-209ENST00000496445 PROX1Q92786 737 aa12.35□□□□□ -0.43
VTI1A-209ENST00000496445 TMEM54Q969K7 222 aa12.35□□□□□ -0.43
VTI1A-209ENST00000496445 LRRC58Q96CX6 371 aa12.35□□□□□ -0.43
VTI1A-209ENST00000496445 FOXB1Q99853 325 aa12.35□□□□□ -0.43
VTI1A-209ENST00000496445 B3GAT2Q9NPZ5 323 aa12.35□□□□□ -0.43
VTI1A-209ENST00000496445 MEPEQ9NQ76 525 aaPredicted RBP12.35□□□□□ -0.43
VTI1A-209ENST00000496445 ZNF229Q9UJW7 825 aa12.35□□□□□ -0.43
VTI1A-209ENST00000496445 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.34□□□□□ -0.432e-6■□□□□ 8.2
VTI1A-209ENST00000496445 TMEM129A0AVI4 362 aa12.34□□□□□ -0.43
VTI1A-209ENST00000496445 ZNF726A6NNF4 738 aa12.34□□□□□ -0.43
VTI1A-209ENST00000496445 A8MV72 311 aaPredicted RBP12.34□□□□□ -0.43
VTI1A-209ENST00000496445 MRASO14807 208 aa12.34□□□□□ -0.43
VTI1A-209ENST00000496445 IGFBP1P08833 259 aaPredicted RBP12.34□□□□□ -0.43
VTI1A-209ENST00000496445 ASAH2BP0C7U1 165 aa12.34□□□□□ -0.43
VTI1A-209ENST00000496445 IGHV4-31P0DP07 118 aa12.34□□□□□ -0.43
VTI1A-209ENST00000496445 CSNK1A1P48729 337 aa12.34□□□□□ -0.43
VTI1A-209ENST00000496445 PDLIM4P50479 330 aa12.34□□□□□ -0.43
VTI1A-209ENST00000496445 ARFIP2P53365 341 aa12.34□□□□□ -0.43
VTI1A-209ENST00000496445 ZP4Q12836 540 aa12.34□□□□□ -0.43
VTI1A-209ENST00000496445 KLF10Q13118 480 aa12.34□□□□□ -0.43
VTI1A-209ENST00000496445 CYLC2Q14093 348 aaPredicted RBP12.34□□□□□ -0.43
VTI1A-209ENST00000496445 GSG1Q2KHT4 349 aa12.34□□□□□ -0.43
VTI1A-209ENST00000496445 KRT80Q6KB66 452 aa12.34□□□□□ -0.43
VTI1A-209ENST00000496445 TTC33Q6PID6 262 aaPredicted RBP12.34□□□□□ -0.43
VTI1A-209ENST00000496445 SLC35D2Q76EJ3 337 aa12.34□□□□□ -0.43
VTI1A-209ENST00000496445 CARM1Q86X55 608 aa12.34□□□□□ -0.43
VTI1A-209ENST00000496445 HIPK1Q86Z02 1210 aa12.34□□□□□ -0.43
VTI1A-209ENST00000496445 CDK20Q8IZL9 346 aa12.34□□□□□ -0.43
VTI1A-209ENST00000496445 SVOPLQ8N434 492 aa12.34□□□□□ -0.43
VTI1A-209ENST00000496445 OR6X1Q8NH79 312 aa12.34□□□□□ -0.43
VTI1A-209ENST00000496445 SLC26A7Q8TE54 656 aa12.34□□□□□ -0.43
VTI1A-209ENST00000496445 RASSF5Q8WWW0 418 aa12.34□□□□□ -0.43
VTI1A-209ENST00000496445 MPP4Q96JB8 637 aa12.34□□□□□ -0.43
VTI1A-209ENST00000496445 VRK1Q99986 396 aaPredicted RBP12.34□□□□□ -0.43
VTI1A-209ENST00000496445 SLC19A3Q9BZV2 496 aa12.34□□□□□ -0.43
VTI1A-209ENST00000496445 SAR1AQ9NR31 198 aa12.34□□□□□ -0.43
VTI1A-209ENST00000496445 NANSQ9NR45 359 aa12.34□□□□□ -0.43
VTI1A-209ENST00000496445 ZNF446Q9NWS9 450 aa12.34□□□□□ -0.43
VTI1A-209ENST00000496445 POFUT2Q9Y2G5 429 aa12.34□□□□□ -0.43
VTI1A-209ENST00000496445 BBIP1A8MTZ0 92 aa12.33□□□□□ -0.44
VTI1A-209ENST00000496445 hCG_2039718K7EN88 272 aa12.33□□□□□ -0.44
VTI1A-209ENST00000496445 TROVE2P10155 538 aaKnown RBP eCLIP12.33□□□□□ -0.44
VTI1A-209ENST00000496445 CD79AP11912 226 aa12.33□□□□□ -0.44
VTI1A-209ENST00000496445 NPR2P20594 1047 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms