RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 CH25HO95992 272 aa13.67□□□□□ -0.22
HDAC4-213ENST00000496347 ASAH2BP0C7U1 165 aa13.67□□□□□ -0.22
HDAC4-213ENST00000496347 THRBP10828 461 aa13.67□□□□□ -0.22
HDAC4-213ENST00000496347 IFNGR1P15260 489 aa13.67□□□□□ -0.22
HDAC4-213ENST00000496347 CBR1P16152 277 aa13.67□□□□□ -0.22
HDAC4-213ENST00000496347 CSNK1A1P48729 337 aa13.67□□□□□ -0.22
HDAC4-213ENST00000496347 ZP4Q12836 540 aa13.67□□□□□ -0.22
HDAC4-213ENST00000496347 SF3A3Q12874 501 aaKnown RBP eCLIP13.67□□□□□ -0.22
HDAC4-213ENST00000496347 RAB35Q15286 201 aa13.67□□□□□ -0.22
HDAC4-213ENST00000496347 LRRC23Q53EV4 343 aaPredicted RBP13.67□□□□□ -0.22
HDAC4-213ENST00000496347 DEF8Q6ZN54 512 aa13.67□□□□□ -0.22
HDAC4-213ENST00000496347 HDDC2Q7Z4H3 204 aa13.67□□□□□ -0.22
HDAC4-213ENST00000496347 NANOGNBQ7Z5D8 188 aa13.67□□□□□ -0.22
HDAC4-213ENST00000496347 IL17RDQ8NFM7 739 aa13.67□□□□□ -0.22
HDAC4-213ENST00000496347 OR6N1Q8NGY5 312 aa13.67□□□□□ -0.22
HDAC4-213ENST00000496347 OR6X1Q8NH79 312 aa13.67□□□□□ -0.22
HDAC4-213ENST00000496347 RP9Q8TA86 221 aaKnown RBP13.67□□□□□ -0.22
HDAC4-213ENST00000496347 ZNF837Q96EG3 531 aaPredicted RBP13.67□□□□□ -0.22
HDAC4-213ENST00000496347 EMC6Q9BV81 110 aa13.67□□□□□ -0.22
HDAC4-213ENST00000496347 ZNF442Q9H7R0 627 aa13.67□□□□□ -0.22
HDAC4-213ENST00000496347 FBXO9Q9UK97 447 aaPredicted RBP13.67□□□□□ -0.22
HDAC4-213ENST00000496347 FKBP7Q9Y680 259 aa13.67□□□□□ -0.22
HDAC4-213ENST00000496347 PMF1-BGLAPU3KQ54 211 aa13.67□□□□□ -0.22
HDAC4-213ENST00000496347 LOC100653049A0A140TA62 436 aa13.66□□□□□ -0.22
HDAC4-213ENST00000496347 C11orf98E9PRG8 122 aa13.66□□□□□ -0.22
HDAC4-213ENST00000496347 SSX4O60224 188 aa13.66□□□□□ -0.22
HDAC4-213ENST00000496347 CCDC22O60826 627 aa13.66□□□□□ -0.22
HDAC4-213ENST00000496347 SERPINI2O75830 405 aa13.66□□□□□ -0.22
HDAC4-213ENST00000496347 KRT34O76011 436 aa13.66□□□□□ -0.22
HDAC4-213ENST00000496347 HIST1H2ABP04908 130 aa13.66□□□□□ -0.22
HDAC4-213ENST00000496347 SERPINF1P36955 418 aa13.66□□□□□ -0.22
HDAC4-213ENST00000496347 IDH3GP51553 393 aaPredicted RBP13.66□□□□□ -0.22
HDAC4-213ENST00000496347 BIDP55957 195 aa13.66□□□□□ -0.22
HDAC4-213ENST00000496347 PPP2R2BQ00005 443 aa13.66□□□□□ -0.22
HDAC4-213ENST00000496347 KRTAP1-1Q07627 177 aa13.66□□□□□ -0.22
HDAC4-213ENST00000496347 CAMK2DQ13557 499 aa13.66□□□□□ -0.22
HDAC4-213ENST00000496347 EFNB3Q15768 340 aa13.66□□□□□ -0.22
HDAC4-213ENST00000496347 SWI5Q1ZZU3 235 aa13.66□□□□□ -0.22
HDAC4-213ENST00000496347 CYBRD1Q53TN4 286 aa13.66□□□□□ -0.22
HDAC4-213ENST00000496347 PHYHD1Q5SRE7 291 aa13.66□□□□□ -0.22
HDAC4-213ENST00000496347 ZNF813Q6ZN06 617 aa13.66□□□□□ -0.22
HDAC4-213ENST00000496347 SLC35D2Q76EJ3 337 aa13.66□□□□□ -0.22
HDAC4-213ENST00000496347 HIST3H2AQ7L7L0 130 aa13.66□□□□□ -0.22
HDAC4-213ENST00000496347 SLC46A3Q7Z3Q1 461 aa13.66□□□□□ -0.22
HDAC4-213ENST00000496347 MDP1Q86V88 176 aa13.66□□□□□ -0.22
HDAC4-213ENST00000496347 MICU2Q8IYU8 434 aa13.66□□□□□ -0.22
HDAC4-213ENST00000496347 HIST1H2ACQ93077 130 aa13.66□□□□□ -0.22
HDAC4-213ENST00000496347 TXNDC15Q96J42 360 aa13.66□□□□□ -0.22
HDAC4-213ENST00000496347 PRSS27Q9BQR3 290 aa13.66□□□□□ -0.22
HDAC4-213ENST00000496347 RHNO1Q9BSD3 238 aa13.66□□□□□ -0.22
HDAC4-213ENST00000496347 DENND2DQ9H6A0 471 aaPredicted RBP13.66□□□□□ -0.22
HDAC4-213ENST00000496347 FBXL3Q9UKT7 428 aa13.66□□□□□ -0.22
HDAC4-213ENST00000496347 RTTNQ86VV8 2226 aa13.66□□□□□ -0.22
HDAC4-213ENST00000496347 CHD3Q12873 2000 aaKnown RBP13.65□□□□□ -0.22
HDAC4-213ENST00000496347 ELOVL7A1L3X0 281 aa13.65□□□□□ -0.22
HDAC4-213ENST00000496347 ZNF503-AS2A6NEH8 195 aa13.65□□□□□ -0.22
HDAC4-213ENST00000496347 RNF13O43567 381 aa13.65□□□□□ -0.22
HDAC4-213ENST00000496347 SEC14L2O76054 403 aa13.65□□□□□ -0.22
HDAC4-213ENST00000496347 MT-ND1P03886 318 aa13.65□□□□□ -0.22
HDAC4-213ENST00000496347 CELA3BP08861 270 aa13.65□□□□□ -0.22
HDAC4-213ENST00000496347 UMPSP11172 480 aa13.65□□□□□ -0.22
HDAC4-213ENST00000496347 B4GALT1P15291 398 aa13.65□□□□□ -0.22
HDAC4-213ENST00000496347 CALCRP30988 508 aa13.65□□□□□ -0.22
HDAC4-213ENST00000496347 KDELR2P33947 212 aa13.65□□□□□ -0.22
HDAC4-213ENST00000496347 CAPZA2P47755 286 aa13.65□□□□□ -0.22
HDAC4-213ENST00000496347 EFNA4P52798 201 aa13.65□□□□□ -0.22
HDAC4-213ENST00000496347 NPRL3Q12980 569 aa13.65□□□□□ -0.22
HDAC4-213ENST00000496347 GSG1Q2KHT4 349 aa13.65□□□□□ -0.22
HDAC4-213ENST00000496347 MYPOPQ86VE0 399 aaPredicted RBP13.65□□□□□ -0.22
HDAC4-213ENST00000496347 POU5F2Q8N7G0 328 aa13.65□□□□□ -0.22
HDAC4-213ENST00000496347 OR10H5Q8NGA6 315 aa13.65□□□□□ -0.22
HDAC4-213ENST00000496347 LZICQ8WZA0 190 aa13.65□□□□□ -0.22
HDAC4-213ENST00000496347 ZNF566Q969W8 418 aa13.65□□□□□ -0.22
HDAC4-213ENST00000496347 SLC25A44Q96H78 314 aaPredicted RBP13.65□□□□□ -0.22
HDAC4-213ENST00000496347 PRRC1Q96M27 445 aa13.65□□□□□ -0.22
HDAC4-213ENST00000496347 FOXB1Q99853 325 aa13.65□□□□□ -0.22
HDAC4-213ENST00000496347 SEC61A2Q9H9S3 476 aa13.65□□□□□ -0.22
HDAC4-213ENST00000496347 MEPEQ9NQ76 525 aaPredicted RBP13.65□□□□□ -0.22
HDAC4-213ENST00000496347 TAS2R5Q9NYW4 299 aa13.65□□□□□ -0.22
HDAC4-213ENST00000496347 POFUT2Q9Y2G5 429 aa13.65□□□□□ -0.22
HDAC4-213ENST00000496347 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.64□□□□□ -0.236e-7■■■□□ 15.8
HDAC4-213ENST00000496347 IGHV2OR16-5A0A0B4J2B6 119 aa13.64□□□□□ -0.23
HDAC4-213ENST00000496347 HTR3EA5X5Y0 456 aa13.64□□□□□ -0.23
HDAC4-213ENST00000496347 CENPBD1B2RD01 187 aa13.64□□□□□ -0.23
HDAC4-213ENST00000496347 B9A039 149 aa13.64□□□□□ -0.23
HDAC4-213ENST00000496347 NDUFAB1O14561 156 aa13.64□□□□□ -0.23
HDAC4-213ENST00000496347 ATP8B1O43520 1251 aa13.64□□□□□ -0.23
HDAC4-213ENST00000496347 UBL3O95164 117 aa13.64□□□□□ -0.23
HDAC4-213ENST00000496347 IGHG1P01857 330 aa13.64□□□□□ -0.23
HDAC4-213ENST00000496347 SLC25A16P16260 332 aa13.64□□□□□ -0.23
HDAC4-213ENST00000496347 TNFRSF1BP20333 461 aa13.64□□□□□ -0.23
HDAC4-213ENST00000496347 DAP3P51398 398 aaKnown RBP13.64□□□□□ -0.23
HDAC4-213ENST00000496347 ADIPOQQ15848 244 aa13.64□□□□□ -0.23
HDAC4-213ENST00000496347 WDFY1Q8IWB7 410 aa13.64□□□□□ -0.23
HDAC4-213ENST00000496347 LRRC17Q8N6Y2 441 aa13.64□□□□□ -0.23
HDAC4-213ENST00000496347 ZNF525Q8N782 197 aa13.64□□□□□ -0.23
HDAC4-213ENST00000496347 TMEM255BQ8WV15 326 aa13.64□□□□□ -0.23
HDAC4-213ENST00000496347 TMEM239Q8WW34 195 aa13.64□□□□□ -0.23
HDAC4-213ENST00000496347 LIPHQ8WWY8 451 aa13.64□□□□□ -0.23
HDAC4-213ENST00000496347 TMEM54Q969K7 222 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms