RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 C5orf46Q6UWT4 87 aa10.03□□□□□ -0.8
CMSS1-208ENST00000496116 DPY19L4Q7Z388 723 aa10.03□□□□□ -0.8
CMSS1-208ENST00000496116 MISPQ8IVT2 679 aa10.03□□□□□ -0.8
CMSS1-208ENST00000496116 ASCC1Q8N9N2 400 aaKnown RBP10.03□□□□□ -0.8
CMSS1-208ENST00000496116 SLC25A36Q96CQ1 311 aa10.03□□□□□ -0.8
CMSS1-208ENST00000496116 KLHDC3Q9BQ90 382 aa10.03□□□□□ -0.8
CMSS1-208ENST00000496116 SLC25A18Q9H1K4 315 aa10.03□□□□□ -0.8
CMSS1-208ENST00000496116 TMEM165Q9HC07 324 aa10.03□□□□□ -0.8
CMSS1-208ENST00000496116 PAQR5Q9NXK6 330 aaPredicted RBP10.03□□□□□ -0.8
CMSS1-208ENST00000496116 PCDHGA9Q9Y5G4 932 aaKnown RBP10.03□□□□□ -0.8
CMSS1-208ENST00000496116 NUBP2Q9Y5Y2 271 aa10.03□□□□□ -0.8
CMSS1-208ENST00000496116 TMED7-TICAM2A0A0A6YYA0 188 aa10.03□□□□□ -0.8
CMSS1-208ENST00000496116 CCDC85CA6NKD9 419 aa10.03□□□□□ -0.8
CMSS1-208ENST00000496116 TMEM212A6NML5 194 aa10.03□□□□□ -0.8
CMSS1-208ENST00000496116 C11orf98E9PRG8 122 aa10.03□□□□□ -0.8
CMSS1-208ENST00000496116 OR6A2O95222 327 aa10.03□□□□□ -0.8
CMSS1-208ENST00000496116 ABHD16AO95870 558 aa10.03□□□□□ -0.8
CMSS1-208ENST00000496116 ALOX5APP20292 161 aa10.03□□□□□ -0.8
CMSS1-208ENST00000496116 CXCL12P48061 93 aa10.03□□□□□ -0.8
CMSS1-208ENST00000496116 BLVRAP53004 296 aa10.03□□□□□ -0.8
CMSS1-208ENST00000496116 CCDC92Q53HC0 331 aaPredicted RBP10.03□□□□□ -0.8
CMSS1-208ENST00000496116 HES5Q5TA89 166 aa10.03□□□□□ -0.8
CMSS1-208ENST00000496116 SLC22A10Q63ZE4 541 aa10.03□□□□□ -0.8
CMSS1-208ENST00000496116 RHBDD2Q6NTF9 364 aa10.03□□□□□ -0.8
CMSS1-208ENST00000496116 LANCL3Q6ZV70 420 aa10.03□□□□□ -0.8
CMSS1-208ENST00000496116 LIX1LQ8IVB5 337 aa10.03□□□□□ -0.8
CMSS1-208ENST00000496116 PM20D2Q8IYS1 436 aa10.03□□□□□ -0.8
CMSS1-208ENST00000496116 THEM6Q8WUY1 208 aa10.03□□□□□ -0.8
CMSS1-208ENST00000496116 SMIM4Q8WVI0 70 aa10.03□□□□□ -0.8
CMSS1-208ENST00000496116 RGP1Q92546 391 aaPredicted RBP10.03□□□□□ -0.8
CMSS1-208ENST00000496116 NSMAFQ92636 917 aa10.03□□□□□ -0.8
CMSS1-208ENST00000496116 THRSPQ92748 146 aa10.03□□□□□ -0.8
CMSS1-208ENST00000496116 HLA-CQ95604 372 aa10.03□□□□□ -0.8
CMSS1-208ENST00000496116 MAP6Q96JE9 813 aa10.03□□□□□ -0.8
CMSS1-208ENST00000496116 RNF170Q96K19 258 aa10.03□□□□□ -0.8
CMSS1-208ENST00000496116 ELF4Q99607 663 aaPredicted RBP10.03□□□□□ -0.8
CMSS1-208ENST00000496116 NUDT22Q9BRQ3 303 aa10.03□□□□□ -0.8
CMSS1-208ENST00000496116 TRAF4Q9BUZ4 470 aaPredicted RBP10.03□□□□□ -0.8
CMSS1-208ENST00000496116 TGIF2Q9GZN2 237 aa10.03□□□□□ -0.8
CMSS1-208ENST00000496116 TSPAN10Q9H1Z9 355 aaPredicted RBP10.03□□□□□ -0.8
CMSS1-208ENST00000496116 MCUBQ9NWR8 336 aa10.03□□□□□ -0.8
CMSS1-208ENST00000496116 TAS2R10Q9NYW0 307 aa10.03□□□□□ -0.8
CMSS1-208ENST00000496116 FRRS1LQ9P0K9 344 aa10.03□□□□□ -0.8
CMSS1-208ENST00000496116 CTSFQ9UBX1 484 aa10.03□□□□□ -0.8
CMSS1-208ENST00000496116 KLHDC2Q9Y2U9 406 aa10.03□□□□□ -0.8
CMSS1-208ENST00000496116 TMED7Q9Y3B3 224 aa10.03□□□□□ -0.8
CMSS1-208ENST00000496116 FKBP7Q9Y680 259 aa10.03□□□□□ -0.8
CMSS1-208ENST00000496116 USP34Q70CQ2 3546 aa10.02□□□□□ -0.8
CMSS1-208ENST00000496116 OR2T1O43869 369 aa10.02□□□□□ -0.81
CMSS1-208ENST00000496116 FADS1O60427 444 aa10.02□□□□□ -0.81
CMSS1-208ENST00000496116 AKR7A3O95154 331 aa10.02□□□□□ -0.81
CMSS1-208ENST00000496116 HLA-DQA2P01906 255 aa10.02□□□□□ -0.81
CMSS1-208ENST00000496116 RAF1P04049 648 aa10.02□□□□□ -0.81
CMSS1-208ENST00000496116 GIMD1P0DJR0 217 aa10.02□□□□□ -0.81
CMSS1-208ENST00000496116 MYF5P13349 255 aa10.02□□□□□ -0.81
CMSS1-208ENST00000496116 S100A1P23297 94 aa10.02□□□□□ -0.81
CMSS1-208ENST00000496116 BTCP35070 178 aa10.02□□□□□ -0.81
CMSS1-208ENST00000496116 RCVRNP35243 200 aa10.02□□□□□ -0.81
CMSS1-208ENST00000496116 SLC26A5P58743 744 aa10.02□□□□□ -0.81
CMSS1-208ENST00000496116 RPL27P61353 136 aaKnown RBP10.02□□□□□ -0.81
CMSS1-208ENST00000496116 RNF4P78317 190 aa10.02□□□□□ -0.81
CMSS1-208ENST00000496116 DGCR2P98153 550 aa10.02□□□□□ -0.81
CMSS1-208ENST00000496116 ACY1Q03154 408 aa10.02□□□□□ -0.81
CMSS1-208ENST00000496116 RASGEF1BQ0VAM2 473 aa10.02□□□□□ -0.81
CMSS1-208ENST00000496116 MAB21L1Q13394 359 aa10.02□□□□□ -0.81
CMSS1-208ENST00000496116 DYRK1AQ13627 763 aa10.02□□□□□ -0.81
CMSS1-208ENST00000496116 EFR3AQ14156 821 aa10.02□□□□□ -0.81
CMSS1-208ENST00000496116 C1orf140Q5VVS0 124 aa10.02□□□□□ -0.81
CMSS1-208ENST00000496116 C1QL3Q5VWW1 255 aa10.02□□□□□ -0.81
CMSS1-208ENST00000496116 PTCRAQ6ISU1 281 aaPredicted RBP10.02□□□□□ -0.81
CMSS1-208ENST00000496116 TMEM71Q6P5X7 295 aa10.02□□□□□ -0.81
CMSS1-208ENST00000496116 ESPNLQ6ZVH7 1005 aa10.02□□□□□ -0.81
CMSS1-208ENST00000496116 RABEPKQ7Z6M1 372 aa10.02□□□□□ -0.81
CMSS1-208ENST00000496116 SLC7A5P1Q8MH63 180 aa10.02□□□□□ -0.81
CMSS1-208ENST00000496116 STK35Q8TDR2 534 aa10.02□□□□□ -0.81
CMSS1-208ENST00000496116 GPR119Q8TDV5 335 aa10.02□□□□□ -0.81
CMSS1-208ENST00000496116 TMEM234Q8WY98 164 aa10.02□□□□□ -0.81
CMSS1-208ENST00000496116 HSD17B8Q92506 261 aa10.02□□□□□ -0.81
CMSS1-208ENST00000496116 RNF166Q96A37 237 aaPredicted RBP10.02□□□□□ -0.81
CMSS1-208ENST00000496116 CCDC74AQ96AQ1 378 aa10.02□□□□□ -0.81
CMSS1-208ENST00000496116 TMEM246Q9BRR3 403 aa10.02□□□□□ -0.81
CMSS1-208ENST00000496116 PTDSS2Q9BVG9 487 aa10.02□□□□□ -0.81
CMSS1-208ENST00000496116 SLA2Q9H6Q3 261 aa10.02□□□□□ -0.81
CMSS1-208ENST00000496116 NIPAL2Q9H841 368 aa10.02□□□□□ -0.81
CMSS1-208ENST00000496116 NUDT15Q9NV35 164 aa10.02□□□□□ -0.81
CMSS1-208ENST00000496116 PRUNE2Q8WUY3 3088 aa10.02□□□□□ -0.81
CMSS1-208ENST00000496116 ASXL3Q9C0F0 2248 aa10.02□□□□□ -0.81
CMSS1-208ENST00000496116 TRBV5-5A0A0J9YX44 114 aa10.01□□□□□ -0.81
CMSS1-208ENST00000496116 PRSS37A4D1T9 235 aa10.01□□□□□ -0.81
CMSS1-208ENST00000496116 NPIPB7O75200 414 aa10.01□□□□□ -0.81
CMSS1-208ENST00000496116 AHSA1O95433 338 aa10.01□□□□□ -0.81
CMSS1-208ENST00000496116 PLGP00747 810 aaPredicted RBP10.01□□□□□ -0.81
CMSS1-208ENST00000496116 C1QBP02746 253 aa10.01□□□□□ -0.81
CMSS1-208ENST00000496116 TCRBP04435 133 aa10.01□□□□□ -0.81
CMSS1-208ENST00000496116 RAB40ALP0C0E4 278 aa10.01□□□□□ -0.81
CMSS1-208ENST00000496116 CALCBP10092 127 aa10.01□□□□□ -0.81
CMSS1-208ENST00000496116 TCEA1P23193 301 aaKnown RBP10.01□□□□□ -0.81
CMSS1-208ENST00000496116 FAPQ12884 760 aa10.01□□□□□ -0.81
CMSS1-208ENST00000496116 RNASE12Q5GAN4 147 aaKnown RBP10.01□□□□□ -0.81
CMSS1-208ENST00000496116 BCL2L15Q5TBC7 163 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms