RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 CHI3L2Q15782 390 aa11.42□□□□□ -0.58
COL1A1-209ENST00000495677 MOGQ16653 247 aa11.42□□□□□ -0.58
COL1A1-209ENST00000495677 NKPD1Q17RQ9 610 aa11.42□□□□□ -0.58
COL1A1-209ENST00000495677 HFEQ30201 348 aa11.42□□□□□ -0.58
COL1A1-209ENST00000495677 MS4A18Q3C1V0 323 aa11.42□□□□□ -0.58
COL1A1-209ENST00000495677 C6orf89Q6UWU4 347 aa11.42□□□□□ -0.58
COL1A1-209ENST00000495677 ZNF836Q6ZNA1 936 aa11.42□□□□□ -0.58
COL1A1-209ENST00000495677 PIWIL3Q7Z3Z3 882 aaKnown RBP11.42□□□□□ -0.58
COL1A1-209ENST00000495677 VRK2Q86Y07 508 aa11.42□□□□□ -0.58
COL1A1-209ENST00000495677 ZNF584Q8IVC4 421 aa11.42□□□□□ -0.58
COL1A1-209ENST00000495677 CLIP4Q8N3C7 705 aa11.42□□□□□ -0.58
COL1A1-209ENST00000495677 TRIML2Q8N7C3 387 aa11.42□□□□□ -0.58
COL1A1-209ENST00000495677 ZNF519Q8TB69 540 aa11.42□□□□□ -0.58
COL1A1-209ENST00000495677 SYNPRQ8TBG9 265 aa11.42□□□□□ -0.58
COL1A1-209ENST00000495677 PNPT1Q8TCS8 783 aaKnown RBP11.42□□□□□ -0.58
COL1A1-209ENST00000495677 KTI12Q96EK9 354 aaPredicted RBP11.42□□□□□ -0.58
COL1A1-209ENST00000495677 TIMD4Q96H15 378 aa11.42□□□□□ -0.58
COL1A1-209ENST00000495677 FOXB1Q99853 325 aa11.42□□□□□ -0.58
COL1A1-209ENST00000495677 B3GAT2Q9NPZ5 323 aa11.42□□□□□ -0.58
COL1A1-209ENST00000495677 CALML5Q9NZT1 146 aa11.42□□□□□ -0.58
COL1A1-209ENST00000495677 ZNF69Q9UC07 566 aa11.42□□□□□ -0.58
COL1A1-209ENST00000495677 SEC14L4Q9UDX3 406 aa11.42□□□□□ -0.58
COL1A1-209ENST00000495677 POFUT2Q9Y2G5 429 aa11.42□□□□□ -0.58
COL1A1-209ENST00000495677 CHST2Q9Y4C5 530 aa11.42□□□□□ -0.58
COL1A1-209ENST00000495677 CCDC154A6NI56 674 aa11.41□□□□□ -0.58
COL1A1-209ENST00000495677 CLPTM1O96005 669 aa11.41□□□□□ -0.58
COL1A1-209ENST00000495677 FAM153BP0C7A2 387 aa11.41□□□□□ -0.58
COL1A1-209ENST00000495677 PRG2P13727 222 aa11.41□□□□□ -0.58
COL1A1-209ENST00000495677 CLNS1AP54105 237 aaKnown RBP11.41□□□□□ -0.58
COL1A1-209ENST00000495677 KLF3P57682 345 aaPredicted RBP11.41□□□□□ -0.58
COL1A1-209ENST00000495677 LRRC74AQ0VAA2 488 aa11.41□□□□□ -0.58
COL1A1-209ENST00000495677 BAMBIQ13145 260 aa11.41□□□□□ -0.58
COL1A1-209ENST00000495677 CAMK2DQ13557 499 aa11.41□□□□□ -0.58
COL1A1-209ENST00000495677 RAB39AQ14964 217 aa11.41□□□□□ -0.58
COL1A1-209ENST00000495677 HIST2H2BDQ6DRA6 164 aa11.41□□□□□ -0.58
COL1A1-209ENST00000495677 USP51Q70EK9 711 aa11.41□□□□□ -0.58
COL1A1-209ENST00000495677 IFT20Q8IY31 132 aa11.41□□□□□ -0.58
COL1A1-209ENST00000495677 LRRC34Q8IZ02 419 aa11.41□□□□□ -0.58
COL1A1-209ENST00000495677 C4orf33Q8N1A6 199 aa11.41□□□□□ -0.58
COL1A1-209ENST00000495677 MNS1Q8NEH6 495 aa11.41□□□□□ -0.58
COL1A1-209ENST00000495677 DEFB108BQ8NET1 73 aa11.41□□□□□ -0.58
COL1A1-209ENST00000495677 OR6S1Q8NH40 331 aa11.41□□□□□ -0.58
COL1A1-209ENST00000495677 SNX33Q8WV41 574 aa11.41□□□□□ -0.58
COL1A1-209ENST00000495677 SLC41A3Q96GZ6 507 aa11.41□□□□□ -0.58
COL1A1-209ENST00000495677 ZNF48Q96MX3 618 aaPredicted RBP11.41□□□□□ -0.58
COL1A1-209ENST00000495677 SPATA9Q9BWV2 254 aa11.41□□□□□ -0.58
COL1A1-209ENST00000495677 C1QTNF5Q9BXJ0 243 aa11.41□□□□□ -0.58
COL1A1-209ENST00000495677 ARMC7Q9H6L4 198 aa11.41□□□□□ -0.58
COL1A1-209ENST00000495677 AKTIPQ9H8T0 292 aa11.41□□□□□ -0.58
COL1A1-209ENST00000495677 LEF1Q9UJU2 399 aaPredicted RBP11.41□□□□□ -0.58
COL1A1-209ENST00000495677 ZNF232Q9UNY5 417 aa11.41□□□□□ -0.58
COL1A1-209ENST00000495677 M0R082 166 aa11.4□□□□□ -0.58
COL1A1-209ENST00000495677 SNAP29O95721 258 aa11.4□□□□□ -0.58
COL1A1-209ENST00000495677 NCF2P19878 526 aaPredicted RBP11.4□□□□□ -0.58
COL1A1-209ENST00000495677 AQP5P55064 265 aa11.4□□□□□ -0.58
COL1A1-209ENST00000495677 SLC3A1Q07837 685 aa11.4□□□□□ -0.58
COL1A1-209ENST00000495677 LARS2Q15031 903 aaKnown RBP11.4□□□□□ -0.58
COL1A1-209ENST00000495677 KLF17Q5JT82 389 aaPredicted RBP11.4□□□□□ -0.58
COL1A1-209ENST00000495677 SPANXN4Q5MJ08 99 aa11.4□□□□□ -0.58
COL1A1-209ENST00000495677 ATG16L1Q676U5 607 aa11.4□□□□□ -0.58
COL1A1-209ENST00000495677 C16orf87Q6PH81 154 aa11.4□□□□□ -0.58
COL1A1-209ENST00000495677 WDFY1Q8IWB7 410 aa11.4□□□□□ -0.58
COL1A1-209ENST00000495677 UEVLDQ8IX04 471 aa11.4□□□□□ -0.58
COL1A1-209ENST00000495677 C17orf53Q8N3J3 647 aaPredicted RBP11.4□□□□□ -0.58
COL1A1-209ENST00000495677 ZNF417Q8TAU3 575 aa11.4□□□□□ -0.58
COL1A1-209ENST00000495677 C11orf40Q8WZ69 217 aa11.4□□□□□ -0.58
COL1A1-209ENST00000495677 SLC38A4Q969I6 547 aa11.4□□□□□ -0.58
COL1A1-209ENST00000495677 TAAR8Q969N4 342 aa11.4□□□□□ -0.58
COL1A1-209ENST00000495677 ELMOD3Q96FG2 381 aa11.4□□□□□ -0.58
COL1A1-209ENST00000495677 DUX5Q96PT3 197 aa11.4□□□□□ -0.58
COL1A1-209ENST00000495677 ZNF587Q96SQ5 575 aaPredicted RBP11.4□□□□□ -0.58
COL1A1-209ENST00000495677 DECR2Q9NUI1 292 aa11.4□□□□□ -0.58
COL1A1-209ENST00000495677 TESQ9UGI8 421 aaKnown RBP11.4□□□□□ -0.58
COL1A1-209ENST00000495677 ZNF443Q9Y2A4 671 aaPredicted RBP11.4□□□□□ -0.58
COL1A1-209ENST00000495677 IFT52Q9Y366 437 aa11.4□□□□□ -0.58
COL1A1-209ENST00000495677 E9PBE3 544 aa11.39□□□□□ -0.59
COL1A1-209ENST00000495677 ENTPD5O75356 428 aa11.39□□□□□ -0.59
COL1A1-209ENST00000495677 IGHV3-13P01766 116 aa11.39□□□□□ -0.59
COL1A1-209ENST00000495677 SHBGP04278 402 aa11.39□□□□□ -0.59
COL1A1-209ENST00000495677 B4GALT1P15291 398 aa11.39□□□□□ -0.59
COL1A1-209ENST00000495677 MDKP21741 143 aaPredicted RBP11.39□□□□□ -0.59
COL1A1-209ENST00000495677 GRPRP30550 384 aa11.39□□□□□ -0.59
COL1A1-209ENST00000495677 S100A3P33764 101 aa11.39□□□□□ -0.59
COL1A1-209ENST00000495677 CRISP3P54108 245 aa11.39□□□□□ -0.59
COL1A1-209ENST00000495677 LCN2P80188 198 aa11.39□□□□□ -0.59
COL1A1-209ENST00000495677 ZNF154Q13106 437 aa11.39□□□□□ -0.59
COL1A1-209ENST00000495677 SLC9A3R2Q15599 337 aa11.39□□□□□ -0.59
COL1A1-209ENST00000495677 ALKBH6Q3KRA9 238 aa11.39□□□□□ -0.59
COL1A1-209ENST00000495677 ARMCX4Q5H9R4 360 aa11.39□□□□□ -0.59
COL1A1-209ENST00000495677 COX20Q5RI15 118 aa11.39□□□□□ -0.59
COL1A1-209ENST00000495677 ZNF362Q5T0B9 420 aaPredicted RBP11.39□□□□□ -0.59
COL1A1-209ENST00000495677 LEG1Q6P5S2 330 aa11.39□□□□□ -0.59
COL1A1-209ENST00000495677 C9orf139Q6ZV77 190 aa11.39□□□□□ -0.59
COL1A1-209ENST00000495677 SERPINA11Q86U17 422 aa11.39□□□□□ -0.59
COL1A1-209ENST00000495677 SKA3Q8IX90 412 aa11.39□□□□□ -0.59
COL1A1-209ENST00000495677 BCL6BQ8N143 479 aaPredicted RBP11.39□□□□□ -0.59
COL1A1-209ENST00000495677 LSMEM1Q8N8F7 131 aa11.39□□□□□ -0.59
COL1A1-209ENST00000495677 GLB1L3Q8NCI6 653 aaPredicted RBP11.39□□□□□ -0.59
COL1A1-209ENST00000495677 ST7LQ8TDW4 575 aa11.39□□□□□ -0.59
COL1A1-209ENST00000495677 TMIGD2Q96BF3 282 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms