RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 LRRC17Q8N6Y2 441 aa10.06□□□□□ -0.8
VTI1A-208ENST00000494728 C11orf65Q8NCR3 313 aa10.06□□□□□ -0.8
VTI1A-208ENST00000494728 STON2Q8WXE9 905 aa10.06□□□□□ -0.8
VTI1A-208ENST00000494728 PROX1Q92786 737 aa10.06□□□□□ -0.8
VTI1A-208ENST00000494728 MSI2Q96DH6 328 aaKnown RBP10.06□□□□□ -0.8
VTI1A-208ENST00000494728 MAGEB18Q96M61 343 aa10.06□□□□□ -0.8
VTI1A-208ENST00000494728 FOXN4Q96NZ1 517 aa10.06□□□□□ -0.8
VTI1A-208ENST00000494728 MCHR1Q99705 422 aa10.06□□□□□ -0.8
VTI1A-208ENST00000494728 VRK1Q99986 396 aaPredicted RBP10.06□□□□□ -0.8
VTI1A-208ENST00000494728 KCNS3Q9BQ31 491 aa10.06□□□□□ -0.8
VTI1A-208ENST00000494728 ZNF442Q9H7R0 627 aa10.06□□□□□ -0.8
VTI1A-208ENST00000494728 TMEM27Q9HBJ8 222 aa10.06□□□□□ -0.8
VTI1A-208ENST00000494728 NDUFAF1Q9Y375 327 aa10.06□□□□□ -0.8
VTI1A-208ENST00000494728 CORINQ9Y5Q5 1042 aa10.06□□□□□ -0.8
VTI1A-208ENST00000494728 FKBP7Q9Y680 259 aa10.06□□□□□ -0.8
VTI1A-208ENST00000494728 A0A0G2JND7 137 aa10.05□□□□□ -0.8
VTI1A-208ENST00000494728 HMGB1P1B2RPK0 211 aaPredicted RBP10.05□□□□□ -0.8
VTI1A-208ENST00000494728 ANGPT2O15123 496 aa10.05□□□□□ -0.8
VTI1A-208ENST00000494728 CHP2O43745 196 aa10.05□□□□□ -0.8
VTI1A-208ENST00000494728 AKAP8O43823 692 aaKnown RBP10.05□□□□□ -0.8
VTI1A-208ENST00000494728 SERPINB7O75635 380 aa10.05□□□□□ -0.8
VTI1A-208ENST00000494728 CSF3P09919 207 aa10.05□□□□□ -0.8
VTI1A-208ENST00000494728 PATE4P0C8F1 98 aa10.05□□□□□ -0.8
VTI1A-208ENST00000494728 ADORA3P0DMS8 318 aa10.05□□□□□ -0.8
VTI1A-208ENST00000494728 BMP4P12644 408 aa10.05□□□□□ -0.8
VTI1A-208ENST00000494728 HOXB1P14653 301 aaPredicted RBP10.05□□□□□ -0.8
VTI1A-208ENST00000494728 IFNGR1P15260 489 aa10.05□□□□□ -0.8
VTI1A-208ENST00000494728 H2AFXP16104 143 aaPredicted RBP10.05□□□□□ -0.8
VTI1A-208ENST00000494728 PCGF2P35227 344 aa10.05□□□□□ -0.8
VTI1A-208ENST00000494728 PIGFQ07326 219 aa10.05□□□□□ -0.8
VTI1A-208ENST00000494728 PMS2P3Q13401 168 aa10.05□□□□□ -0.8
VTI1A-208ENST00000494728 NFYCQ13952 458 aa10.05□□□□□ -0.8
VTI1A-208ENST00000494728 MELKQ14680 651 aa10.05□□□□□ -0.8
VTI1A-208ENST00000494728 ZNF74Q16587 644 aa10.05□□□□□ -0.8
VTI1A-208ENST00000494728 RABL3Q5HYI8 236 aa10.05□□□□□ -0.8
VTI1A-208ENST00000494728 CGB2Q6NT52 195 aa10.05□□□□□ -0.8
VTI1A-208ENST00000494728 ZNF613Q6PF04 617 aa10.05□□□□□ -0.8
VTI1A-208ENST00000494728 ZNF813Q6ZN06 617 aa10.05□□□□□ -0.8
VTI1A-208ENST00000494728 ZNF584Q8IVC4 421 aa10.05□□□□□ -0.8
VTI1A-208ENST00000494728 C10orf53Q8N6V4 93 aa10.05□□□□□ -0.8
VTI1A-208ENST00000494728 OR4F15Q8NGB8 312 aa10.05□□□□□ -0.8
VTI1A-208ENST00000494728 OR5J2Q8NH18 312 aa10.05□□□□□ -0.8
VTI1A-208ENST00000494728 OR10A6Q8NH74 314 aa10.05□□□□□ -0.8
VTI1A-208ENST00000494728 ADAMTS16Q8TE57 1224 aa10.05□□□□□ -0.8
VTI1A-208ENST00000494728 EPYCQ99645 322 aa10.05□□□□□ -0.8
VTI1A-208ENST00000494728 DOK1Q99704 481 aa10.05□□□□□ -0.8
VTI1A-208ENST00000494728 PRSS27Q9BQR3 290 aa10.05□□□□□ -0.8
VTI1A-208ENST00000494728 PIMREGQ9BSJ6 248 aa10.05□□□□□ -0.8
VTI1A-208ENST00000494728 ZNF426Q9BUY5 554 aa10.05□□□□□ -0.8
VTI1A-208ENST00000494728 ASPNQ9BXN1 380 aa10.05□□□□□ -0.8
VTI1A-208ENST00000494728 ULBP2Q9BZM5 246 aa10.05□□□□□ -0.8
VTI1A-208ENST00000494728 CHODLQ9H9P2 273 aa10.05□□□□□ -0.8
VTI1A-208ENST00000494728 TAS2R5Q9NYW4 299 aa10.05□□□□□ -0.8
VTI1A-208ENST00000494728 SLC13A4Q9UKG4 626 aa10.05□□□□□ -0.8
VTI1A-208ENST00000494728 NOX1Q9Y5S8 564 aa10.05□□□□□ -0.8
VTI1A-208ENST00000494728 SH3PXD2BA1X283 911 aa10.04□□□□□ -0.8
VTI1A-208ENST00000494728 LRP5LA4QPB2 252 aa10.04□□□□□ -0.8
VTI1A-208ENST00000494728 LYNX1G3V0Z9 82 aa10.04□□□□□ -0.8
VTI1A-208ENST00000494728 FMO6PO60774 539 aa10.04□□□□□ -0.8
VTI1A-208ENST00000494728 SHOX2O60902 331 aaPredicted RBP10.04□□□□□ -0.8
VTI1A-208ENST00000494728 CH25HO95992 272 aa10.04□□□□□ -0.8
VTI1A-208ENST00000494728 FAM157CP0CG43 387 aa10.04□□□□□ -0.8
VTI1A-208ENST00000494728 LYNX1P0DP58 116 aa10.04□□□□□ -0.8
VTI1A-208ENST00000494728 CD79AP11912 226 aa10.04□□□□□ -0.8
VTI1A-208ENST00000494728 NPR2P20594 1047 aa10.04□□□□□ -0.8
VTI1A-208ENST00000494728 FUT4P22083 530 aa10.04□□□□□ -0.8
VTI1A-208ENST00000494728 AHCYP23526 432 aa10.04□□□□□ -0.8
VTI1A-208ENST00000494728 ARR3P36575 388 aa10.04□□□□□ -0.8
VTI1A-208ENST00000494728 GIPRP48546 466 aa10.04□□□□□ -0.8
VTI1A-208ENST00000494728 BIDP55957 195 aa10.04□□□□□ -0.8
VTI1A-208ENST00000494728 LSM11P83369 360 aaKnown RBP eCLIP10.04□□□□□ -0.8
VTI1A-208ENST00000494728 RBBP4Q09028 425 aa10.04□□□□□ -0.8
VTI1A-208ENST00000494728 SF3A3Q12874 501 aaKnown RBP eCLIP10.04□□□□□ -0.8
VTI1A-208ENST00000494728 TRIP10Q15642 601 aa10.04□□□□□ -0.8
VTI1A-208ENST00000494728 GSG1Q2KHT4 349 aa10.04□□□□□ -0.8
VTI1A-208ENST00000494728 SPATA21Q7Z572 469 aa10.04□□□□□ -0.8
VTI1A-208ENST00000494728 PXKQ7Z7A4 578 aa10.04□□□□□ -0.8
VTI1A-208ENST00000494728 BHLHE22Q8NFJ8 381 aaPredicted RBP10.04□□□□□ -0.8
VTI1A-208ENST00000494728 SPATA3Q8NHX4 192 aa10.04□□□□□ -0.8
VTI1A-208ENST00000494728 TMEM54Q969K7 222 aa10.04□□□□□ -0.8
VTI1A-208ENST00000494728 LRR1Q96L50 414 aa10.04□□□□□ -0.8
VTI1A-208ENST00000494728 KCNK17Q96T54 332 aa10.04□□□□□ -0.8
VTI1A-208ENST00000494728 FOXB1Q99853 325 aa10.04□□□□□ -0.8
VTI1A-208ENST00000494728 MRPL37Q9BZE1 423 aaKnown RBP10.04□□□□□ -0.8
VTI1A-208ENST00000494728 PCDHAC1Q9H158 963 aa10.04□□□□□ -0.8
VTI1A-208ENST00000494728 TPK1Q9H3S4 243 aa10.04□□□□□ -0.8
VTI1A-208ENST00000494728 RABEP2Q9H5N1 569 aa10.04□□□□□ -0.8
VTI1A-208ENST00000494728 MEPEQ9NQ76 525 aaPredicted RBP10.04□□□□□ -0.8
VTI1A-208ENST00000494728 SELENONQ9NZV5 590 aa10.04□□□□□ -0.8
VTI1A-208ENST00000494728 MYEF2Q9P2K5 600 aaKnown RBP10.04□□□□□ -0.8
VTI1A-208ENST00000494728 SLC7A7Q9UM01 511 aa10.04□□□□□ -0.8
VTI1A-208ENST00000494728 WNK2Q9Y3S1 2297 aa10.04□□□□□ -0.8
VTI1A-208ENST00000494728 TANC2Q9HCD6 1990 aa10.03□□□□□ -0.8
VTI1A-208ENST00000494728 LOC390937A0A1W2PQ73 354 aa10.03□□□□□ -0.8
VTI1A-208ENST00000494728 RNF212BA8MTL3 300 aa10.03□□□□□ -0.8
VTI1A-208ENST00000494728 NDUFS8O00217 210 aa10.03□□□□□ -0.8
VTI1A-208ENST00000494728 PHF1O43189 567 aaPredicted RBP10.03□□□□□ -0.8
VTI1A-208ENST00000494728 STAMBPO95630 424 aa10.03□□□□□ -0.8
VTI1A-208ENST00000494728 MT-ATP6P00846 226 aa10.03□□□□□ -0.8
VTI1A-208ENST00000494728 C8BP07358 591 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms