RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 ROR2Q01974 943 aaKnown RBP11.9□□□□□ -0.5
COL1A1-208ENST00000494334 PPP1R8Q12972 351 aaKnown RBP11.9□□□□□ -0.5
COL1A1-208ENST00000494334 STK11Q15831 433 aa11.9□□□□□ -0.5
COL1A1-208ENST00000494334 ACKR1Q16570 336 aa11.9□□□□□ -0.5
COL1A1-208ENST00000494334 ZBED5Q49AG3 693 aa11.9□□□□□ -0.5
COL1A1-208ENST00000494334 TIMM23BQ5SRD1 257 aa11.9□□□□□ -0.5
COL1A1-208ENST00000494334 OR2T5Q6IEZ7 315 aa11.9□□□□□ -0.5
COL1A1-208ENST00000494334 OR7E24Q6IFN5 339 aa11.9□□□□□ -0.5
COL1A1-208ENST00000494334 HMBOX1Q6NT76 420 aa11.9□□□□□ -0.5
COL1A1-208ENST00000494334 ALPK2Q86TB3 2170 aa11.9□□□□□ -0.5
COL1A1-208ENST00000494334 GPR137CQ8N3F9 429 aa11.9□□□□□ -0.5
COL1A1-208ENST00000494334 OR4C15Q8NGM1 316 aa11.9□□□□□ -0.5
COL1A1-208ENST00000494334 OR2T29Q8NH02 315 aa11.9□□□□□ -0.5
COL1A1-208ENST00000494334 ZNF837Q96EG3 531 aaPredicted RBP11.9□□□□□ -0.5
COL1A1-208ENST00000494334 GPR35Q9HC97 309 aa11.9□□□□□ -0.5
COL1A1-208ENST00000494334 KRCC1Q9NPI7 259 aaPredicted RBP11.9□□□□□ -0.5
COL1A1-208ENST00000494334 VNN3Q9NY84 501 aa11.9□□□□□ -0.5
COL1A1-208ENST00000494334 SIGLEC7Q9Y286 467 aa11.9□□□□□ -0.5
COL1A1-208ENST00000494334 ANKHD1Q8IWZ3 2542 aaKnown RBP11.89□□□□□ -0.51
COL1A1-208ENST00000494334 GOSR1O95249 250 aa11.89□□□□□ -0.51
COL1A1-208ENST00000494334 HRGP04196 525 aa11.89□□□□□ -0.51
COL1A1-208ENST00000494334 ZNF26P17031 533 aaPredicted RBP11.89□□□□□ -0.51
COL1A1-208ENST00000494334 CDH2P19022 906 aaPredicted RBP11.89□□□□□ -0.51
COL1A1-208ENST00000494334 DAP3P51398 398 aaKnown RBP11.89□□□□□ -0.51
COL1A1-208ENST00000494334 CTXN1P60606 82 aa11.89□□□□□ -0.51
COL1A1-208ENST00000494334 PRPS1P60891 318 aa11.89□□□□□ -0.51
COL1A1-208ENST00000494334 TGFBR3Q03167 851 aa11.89□□□□□ -0.51
COL1A1-208ENST00000494334 RUNX1T1Q06455 604 aa11.89□□□□□ -0.51
COL1A1-208ENST00000494334 ARMC4Q5T2S8 1044 aa11.89□□□□□ -0.51
COL1A1-208ENST00000494334 ALKBH2Q6NS38 261 aa11.89□□□□□ -0.51
COL1A1-208ENST00000494334 C1orf94Q6P1W5 598 aa11.89□□□□□ -0.51
COL1A1-208ENST00000494334 IGFN1Q86VF2 1251 aa11.89□□□□□ -0.51
COL1A1-208ENST00000494334 TMEM200AQ86VY9 491 aa11.89□□□□□ -0.51
COL1A1-208ENST00000494334 P2RY8Q86VZ1 359 aa11.89□□□□□ -0.51
COL1A1-208ENST00000494334 WFDC8Q8IUA0 241 aa11.89□□□□□ -0.51
COL1A1-208ENST00000494334 WDR31Q8NA23 367 aa11.89□□□□□ -0.51
COL1A1-208ENST00000494334 C1orf162Q8NEQ5 155 aaPredicted RBP11.89□□□□□ -0.51
COL1A1-208ENST00000494334 OR6N1Q8NGY5 312 aa11.89□□□□□ -0.51
COL1A1-208ENST00000494334 ASB10Q8WXI3 467 aa11.89□□□□□ -0.51
COL1A1-208ENST00000494334 TMEM54Q969K7 222 aa11.89□□□□□ -0.51
COL1A1-208ENST00000494334 ZNF566Q969W8 418 aa11.89□□□□□ -0.51
COL1A1-208ENST00000494334 UTP4Q969X6 686 aaKnown RBP11.89□□□□□ -0.51
COL1A1-208ENST00000494334 SLC25A44Q96H78 314 aaPredicted RBP11.89□□□□□ -0.51
COL1A1-208ENST00000494334 BOD1Q96IK1 185 aa11.89□□□□□ -0.51
COL1A1-208ENST00000494334 TXNIPQ9H3M7 391 aa11.89□□□□□ -0.51
COL1A1-208ENST00000494334 CRLF2Q9HC73 371 aa11.89□□□□□ -0.51
COL1A1-208ENST00000494334 CCM2LQ9NUG4 571 aaPredicted RBP11.89□□□□□ -0.51
COL1A1-208ENST00000494334 ZNF346Q9UL40 294 aaKnown RBP11.89□□□□□ -0.51
COL1A1-208ENST00000494334 U3KQV3 271 aa11.89□□□□□ -0.51
COL1A1-208ENST00000494334 CACNA1DQ01668 2161 aa11.88□□□□□ -0.51
COL1A1-208ENST00000494334 A0A1W2PR80 420 aa11.88□□□□□ -0.51
COL1A1-208ENST00000494334 UNC119BA6NIH7 251 aa11.88□□□□□ -0.51
COL1A1-208ENST00000494334 NPIPB13A6NJU9 1138 aa11.88□□□□□ -0.51
COL1A1-208ENST00000494334 NPIPB4C9JG80 1138 aa11.88□□□□□ -0.51
COL1A1-208ENST00000494334 MCIDASD6RGH6 385 aa11.88□□□□□ -0.51
COL1A1-208ENST00000494334 TRMUO75648 421 aaKnown RBP11.88□□□□□ -0.51
COL1A1-208ENST00000494334 CST1P01037 141 aa11.88□□□□□ -0.51
COL1A1-208ENST00000494334 PGA4P0DJD7 388 aa11.88□□□□□ -0.51
COL1A1-208ENST00000494334 PGA3P0DJD8 388 aa11.88□□□□□ -0.51
COL1A1-208ENST00000494334 HOXB6P17509 224 aaKnown RBP11.88□□□□□ -0.51
COL1A1-208ENST00000494334 LOXP28300 417 aaPredicted RBP11.88□□□□□ -0.51
COL1A1-208ENST00000494334 IFNGR2P38484 337 aa11.88□□□□□ -0.51
COL1A1-208ENST00000494334 CSNK1A1P48729 337 aa11.88□□□□□ -0.51
COL1A1-208ENST00000494334 FXYD6P3P58550 94 aa11.88□□□□□ -0.51
COL1A1-208ENST00000494334 PPA1Q15181 289 aa11.88□□□□□ -0.51
COL1A1-208ENST00000494334 TAF11Q15544 211 aa11.88□□□□□ -0.51
COL1A1-208ENST00000494334 CEACAM16Q2WEN9 425 aa11.88□□□□□ -0.51
COL1A1-208ENST00000494334 C1orf146Q5VVC0 180 aa11.88□□□□□ -0.51
COL1A1-208ENST00000494334 PGBD2Q6P3X8 592 aa11.88□□□□□ -0.51
COL1A1-208ENST00000494334 SEZ6L2Q6UXD5 910 aa11.88□□□□□ -0.51
COL1A1-208ENST00000494334 C17orf78Q8N4C9 275 aa11.88□□□□□ -0.51
COL1A1-208ENST00000494334 PAPD5Q8NDF8 572 aaKnown RBP11.88□□□□□ -0.51
COL1A1-208ENST00000494334 OR9Q2Q8NGE9 314 aa11.88□□□□□ -0.51
COL1A1-208ENST00000494334 OR1K1Q8NGR3 316 aa11.88□□□□□ -0.51
COL1A1-208ENST00000494334 OR52N5Q8NH56 324 aa11.88□□□□□ -0.51
COL1A1-208ENST00000494334 SLCO4A1Q96BD0 722 aa11.88□□□□□ -0.51
COL1A1-208ENST00000494334 MUCL1Q96DR8 90 aa11.88□□□□□ -0.51
COL1A1-208ENST00000494334 RSRC1Q96IZ7 334 aaKnown RBP11.88□□□□□ -0.51
COL1A1-208ENST00000494334 MRPL13Q9BYD1 178 aaKnown RBP11.88□□□□□ -0.51
COL1A1-208ENST00000494334 ULBP2Q9BZM5 246 aa11.88□□□□□ -0.51
COL1A1-208ENST00000494334 CLEC4MQ9H2X3 399 aaPredicted RBP11.88□□□□□ -0.51
COL1A1-208ENST00000494334 REEP1Q9H902 201 aa11.88□□□□□ -0.51
COL1A1-208ENST00000494334 SLC17A5Q9NRA2 495 aa11.88□□□□□ -0.51
COL1A1-208ENST00000494334 GLTPQ9NZD2 209 aa11.88□□□□□ -0.51
COL1A1-208ENST00000494334 SAMHD1Q9Y3Z3 626 aaKnown RBP11.88□□□□□ -0.51
COL1A1-208ENST00000494334 SLC25A15Q9Y619 301 aa11.88□□□□□ -0.51
COL1A1-208ENST00000494334 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.87□□□□□ -0.51
COL1A1-208ENST00000494334 A0A1W2PPR1 153 aa11.87□□□□□ -0.51
COL1A1-208ENST00000494334 ZNF99A8MXY4 864 aaPredicted RBP11.87□□□□□ -0.51
COL1A1-208ENST00000494334 FKBP6O75344 327 aa11.87□□□□□ -0.51
COL1A1-208ENST00000494334 CCNB2O95067 398 aa11.87□□□□□ -0.51
COL1A1-208ENST00000494334 NDUFB2O95178 105 aa11.87□□□□□ -0.51
COL1A1-208ENST00000494334 GASTP01350 101 aa11.87□□□□□ -0.51
COL1A1-208ENST00000494334 IGHG1P01857 330 aa11.87□□□□□ -0.51
COL1A1-208ENST00000494334 IGHMP01871 453 aa11.87□□□□□ -0.51
COL1A1-208ENST00000494334 ACADSP16219 412 aa11.87□□□□□ -0.51
COL1A1-208ENST00000494334 FPR3P25089 353 aa11.87□□□□□ -0.51
COL1A1-208ENST00000494334 GSSP48637 474 aa11.87□□□□□ -0.51
COL1A1-208ENST00000494334 RPL27P61353 136 aaKnown RBP11.87□□□□□ -0.51
COL1A1-208ENST00000494334 ARF1P84077 181 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms