RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 OR2A1Q8NGT9 310 aa10.59□□□□□ -0.71
BRCA1-222ENST00000493919 OR13D1Q8NGV5 346 aa10.59□□□□□ -0.71
BRCA1-222ENST00000493919 RXFP4Q8TDU9 374 aa10.59□□□□□ -0.71
BRCA1-222ENST00000493919 ZCCHC14Q8WYQ9 949 aaKnown RBP10.59□□□□□ -0.71
BRCA1-222ENST00000493919 HGDQ93099 445 aa10.59□□□□□ -0.71
BRCA1-222ENST00000493919 SLC46A1Q96NT5 459 aa10.59□□□□□ -0.71
BRCA1-222ENST00000493919 SAP130Q9H0E3 1048 aa10.59□□□□□ -0.71
BRCA1-222ENST00000493919 NMRAL1Q9HBL8 299 aa10.59□□□□□ -0.71
BRCA1-222ENST00000493919 FGF21Q9NSA1 209 aa10.59□□□□□ -0.71
BRCA1-222ENST00000493919 FOXJ2Q9P0K8 574 aa10.59□□□□□ -0.71
BRCA1-222ENST00000493919 BTRCQ9Y297 605 aa10.59□□□□□ -0.71
BRCA1-222ENST00000493919 B3GALT1Q9Y5Z6 326 aa10.59□□□□□ -0.71
BRCA1-222ENST00000493919 TPRP12270 2363 aaKnown RBP10.59□□□□□ -0.71
BRCA1-222ENST00000493919 C9orf172C9J069 976 aa10.58□□□□□ -0.72
BRCA1-222ENST00000493919 TEX46H3BTG2 121 aa10.58□□□□□ -0.72
BRCA1-222ENST00000493919 APC2O95996 2303 aa10.58□□□□□ -0.72
BRCA1-222ENST00000493919 G6PDP11413 515 aa10.58□□□□□ -0.72
BRCA1-222ENST00000493919 GABRA1P14867 456 aa10.58□□□□□ -0.72
BRCA1-222ENST00000493919 AGAP20933 346 aa10.58□□□□□ -0.72
BRCA1-222ENST00000493919 KHKP50053 298 aa10.58□□□□□ -0.72
BRCA1-222ENST00000493919 WNT4P56705 351 aa10.58□□□□□ -0.72
BRCA1-222ENST00000493919 COL9A2Q14055 689 aaPredicted RBP10.58□□□□□ -0.72
BRCA1-222ENST00000493919 ZIC1Q15915 447 aa10.58□□□□□ -0.72
BRCA1-222ENST00000493919 BSXQ3C1V8 233 aa10.58□□□□□ -0.72
BRCA1-222ENST00000493919 DCAF12Q5T6F0 453 aa10.58□□□□□ -0.72
BRCA1-222ENST00000493919 CLEC9AQ6UXN8 241 aa10.58□□□□□ -0.72
BRCA1-222ENST00000493919 CEACAM20Q6UY09 585 aa10.58□□□□□ -0.72
BRCA1-222ENST00000493919 GPSM1Q86YR5 675 aa10.58□□□□□ -0.72
BRCA1-222ENST00000493919 D2HGDHQ8N465 521 aa10.58□□□□□ -0.72
BRCA1-222ENST00000493919 OR51A7Q8NH64 312 aa10.58□□□□□ -0.72
BRCA1-222ENST00000493919 TERB2Q8NHR7 220 aa10.58□□□□□ -0.72
BRCA1-222ENST00000493919 PRR7Q8TB68 274 aa10.58□□□□□ -0.72
BRCA1-222ENST00000493919 ISL2Q96A47 359 aa10.58□□□□□ -0.72
BRCA1-222ENST00000493919 TRMT61AQ96FX7 289 aaKnown RBP10.58□□□□□ -0.72
BRCA1-222ENST00000493919 RCC1LQ96I51 464 aaKnown RBP10.58□□□□□ -0.72
BRCA1-222ENST00000493919 ALKBH3Q96Q83 286 aaPredicted RBP10.58□□□□□ -0.72
BRCA1-222ENST00000493919 TAAR9Q96RI9 348 aa10.58□□□□□ -0.72
BRCA1-222ENST00000493919 DDA1Q9BW61 102 aa10.58□□□□□ -0.72
BRCA1-222ENST00000493919 CALML5Q9NZT1 146 aa10.58□□□□□ -0.72
BRCA1-222ENST00000493919 HCN3Q9P1Z3 774 aa10.58□□□□□ -0.72
BRCA1-222ENST00000493919 SEMA5BQ9P283 1151 aa10.58□□□□□ -0.72
BRCA1-222ENST00000493919 SLC7A11Q9UPY5 501 aa10.58□□□□□ -0.72
BRCA1-222ENST00000493919 NKX6-3A6NJ46 265 aa10.58□□□□□ -0.72
BRCA1-222ENST00000493919 TMEM150CB9EJG8 249 aa10.58□□□□□ -0.72
BRCA1-222ENST00000493919 M0R233 179 aa10.58□□□□□ -0.72
BRCA1-222ENST00000493919 CLIC1O00299 241 aa10.58□□□□□ -0.72
BRCA1-222ENST00000493919 PRICKLE3O43900 615 aaPredicted RBP10.58□□□□□ -0.72
BRCA1-222ENST00000493919 NRP2O60462 931 aa10.58□□□□□ -0.72
BRCA1-222ENST00000493919 SRPX2O60687 465 aaPredicted RBP10.58□□□□□ -0.72
BRCA1-222ENST00000493919 MPC2O95563 127 aa10.58□□□□□ -0.72
BRCA1-222ENST00000493919 NMBP08949 121 aa10.58□□□□□ -0.72
BRCA1-222ENST00000493919 SLC35E2P0CK97 266 aa10.58□□□□□ -0.72
BRCA1-222ENST00000493919 MAGEA12P43365 314 aa10.58□□□□□ -0.72
BRCA1-222ENST00000493919 VSX2P58304 361 aaPredicted RBP10.58□□□□□ -0.72
BRCA1-222ENST00000493919 PSG3Q16557 428 aa10.58□□□□□ -0.72
BRCA1-222ENST00000493919 ARSJQ5FYB0 599 aaPredicted RBP10.58□□□□□ -0.72
BRCA1-222ENST00000493919 CAPN13Q6MZZ7 669 aaPredicted RBP10.58□□□□□ -0.72
BRCA1-222ENST00000493919 CDHR3Q6ZTQ4 885 aa10.58□□□□□ -0.72
BRCA1-222ENST00000493919 LRRC56Q8IYG6 542 aaPredicted RBP10.58□□□□□ -0.72
BRCA1-222ENST00000493919 UXS1Q8NBZ7 420 aa10.58□□□□□ -0.72
BRCA1-222ENST00000493919 OR2M7Q8NG81 312 aa10.58□□□□□ -0.72
BRCA1-222ENST00000493919 TCTN2Q96GX1 697 aa10.58□□□□□ -0.72
BRCA1-222ENST00000493919 AMDHD1Q96NU7 426 aa10.58□□□□□ -0.72
BRCA1-222ENST00000493919 ERMAPQ96PL5 475 aaPredicted RBP10.58□□□□□ -0.72
BRCA1-222ENST00000493919 KLHDC3Q9BQ90 382 aa10.58□□□□□ -0.72
BRCA1-222ENST00000493919 MUC13Q9H3R2 512 aa10.58□□□□□ -0.72
BRCA1-222ENST00000493919 CHODLQ9H9P2 273 aa10.58□□□□□ -0.72
BRCA1-222ENST00000493919 FAM60AQ9NP50 221 aa10.58□□□□□ -0.72
BRCA1-222ENST00000493919 SLC6A20Q9NP91 592 aa10.58□□□□□ -0.72
BRCA1-222ENST00000493919 GPR173Q9NS66 373 aa10.58□□□□□ -0.72
BRCA1-222ENST00000493919 ZNF358Q9NW07 568 aa10.58□□□□□ -0.72
BRCA1-222ENST00000493919 SCN3BQ9NY72 215 aa10.58□□□□□ -0.72
BRCA1-222ENST00000493919 SLCO1C1Q9NYB5 712 aa10.58□□□□□ -0.72
BRCA1-222ENST00000493919 RARRES3Q9UL19 164 aa10.58□□□□□ -0.72
BRCA1-222ENST00000493919 PSG11Q9UQ72 335 aa10.58□□□□□ -0.72
BRCA1-222ENST00000493919 ANKRD11Q6UB99 2663 aaPredicted RBP10.58□□□□□ -0.72
BRCA1-222ENST00000493919 A0A087WV62 115 aa10.57□□□□□ -0.72
BRCA1-222ENST00000493919 MAGEB17A8MXT2 336 aa10.57□□□□□ -0.72
BRCA1-222ENST00000493919 DLGAP1O14490 977 aa10.57□□□□□ -0.72
BRCA1-222ENST00000493919 OR2J2O76002 312 aa10.57□□□□□ -0.72
BRCA1-222ENST00000493919 DXOO77932 396 aaKnown RBP10.57□□□□□ -0.72
BRCA1-222ENST00000493919 OR8U8P0C7N1 319 aa10.57□□□□□ -0.72
BRCA1-222ENST00000493919 BMP7P18075 431 aa10.57□□□□□ -0.72
BRCA1-222ENST00000493919 PSMB10P40306 273 aa10.57□□□□□ -0.72
BRCA1-222ENST00000493919 BUD31P41223 144 aaPredicted RBP10.57□□□□□ -0.72
BRCA1-222ENST00000493919 COMPP49747 757 aaPredicted RBP10.57□□□□□ -0.72
BRCA1-222ENST00000493919 CSRP3P50461 194 aa10.57□□□□□ -0.72
BRCA1-222ENST00000493919 GP2P55259 537 aaKnown RBP10.57□□□□□ -0.72
BRCA1-222ENST00000493919 TGM3Q08188 693 aa10.57□□□□□ -0.72
BRCA1-222ENST00000493919 NPRL3Q12980 569 aa10.57□□□□□ -0.72
BRCA1-222ENST00000493919 C18orf21Q32NC0 220 aaPredicted RBP10.57□□□□□ -0.72
BRCA1-222ENST00000493919 PTCHD3Q3KNS1 767 aa10.57□□□□□ -0.72
BRCA1-222ENST00000493919 LRIF1Q5T3J3 769 aa10.57□□□□□ -0.72
BRCA1-222ENST00000493919 FIGLAQ6QHK4 219 aa10.57□□□□□ -0.72
BRCA1-222ENST00000493919 GRINAQ7Z429 371 aa10.57□□□□□ -0.72
BRCA1-222ENST00000493919 ABHD12BQ7Z5M8 362 aaPredicted RBP10.57□□□□□ -0.72
BRCA1-222ENST00000493919 CRLF3Q8IUI8 442 aa10.57□□□□□ -0.72
BRCA1-222ENST00000493919 PGAM4Q8N0Y7 254 aa10.57□□□□□ -0.72
BRCA1-222ENST00000493919 ZFP82Q8N141 532 aa10.57□□□□□ -0.72
BRCA1-222ENST00000493919 C15orf54Q8N8G6 183 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms