RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 NMNAT3Q96T66 252 aa18.6■□□□□ 0.57
RNF40-203ENST00000493683 GLIPR2Q9H4G4 154 aa18.6■□□□□ 0.57
RNF40-203ENST00000493683 OR14J1Q9UGF5 321 aa18.6■□□□□ 0.57
RNF40-203ENST00000493683 EBPQ15125 230 aaKnown RBP18.6■□□□□ 0.57
RNF40-203ENST00000493683 OR4A16Q8NH70 328 aa18.6■□□□□ 0.57
RNF40-203ENST00000493683 MARC2Q969Z3 335 aa18.6■□□□□ 0.57
RNF40-203ENST00000493683 TOX2Q96NM4 488 aa18.6■□□□□ 0.57
RNF40-203ENST00000493683 MYH7P12883 1935 aa18.6■□□□□ 0.57
RNF40-203ENST00000493683 SCGB1D1O95968 90 aa18.59■□□□□ 0.57
RNF40-203ENST00000493683 PTGER1P34995 402 aa18.59■□□□□ 0.57
RNF40-203ENST00000493683 ZNF93P35789 620 aaPredicted RBP18.59■□□□□ 0.57
RNF40-203ENST00000493683 POLR2IP36954 125 aaKnown RBP18.59■□□□□ 0.57
RNF40-203ENST00000493683 TBPL2Q6SJ96 375 aa18.59■□□□□ 0.57
RNF40-203ENST00000493683 MAVSQ7Z434 540 aa18.59■□□□□ 0.57
RNF40-203ENST00000493683 NANOGP1Q8N7R0 232 aa18.59■□□□□ 0.57
RNF40-203ENST00000493683 MITD1Q8WV92 249 aa18.59■□□□□ 0.57
RNF40-203ENST00000493683 OR5M11Q96RB7 305 aa18.59■□□□□ 0.57
RNF40-203ENST00000493683 PIGMQ9H3S5 423 aa18.59■□□□□ 0.57
RNF40-203ENST00000493683 GPR55Q9Y2T6 319 aaPredicted RBP18.59■□□□□ 0.57
RNF40-203ENST00000493683 AIPO00170 330 aa18.59■□□□□ 0.57
RNF40-203ENST00000493683 TPPPO94811 219 aa18.59■□□□□ 0.57
RNF40-203ENST00000493683 PDGFAP04085 211 aa18.59■□□□□ 0.57
RNF40-203ENST00000493683 TRHRP34981 398 aaPredicted RBP18.59■□□□□ 0.57
RNF40-203ENST00000493683 HOXA1P49639 335 aaPredicted RBP18.59■□□□□ 0.57
RNF40-203ENST00000493683 GABREP78334 506 aa18.59■□□□□ 0.57
RNF40-203ENST00000493683 TMEM52BQ4KMG9 183 aa18.59■□□□□ 0.57
RNF40-203ENST00000493683 MFSD12Q6NUT3 480 aa18.59■□□□□ 0.57
RNF40-203ENST00000493683 AGBL5Q8NDL9 886 aa18.59■□□□□ 0.57
RNF40-203ENST00000493683 LKAAEAR1Q8TD35 194 aa18.59■□□□□ 0.57
RNF40-203ENST00000493683 GABARAPL1Q9H0R8 117 aa18.59■□□□□ 0.57
RNF40-203ENST00000493683 DYNLRB1Q9NP97 96 aa18.59■□□□□ 0.57
RNF40-203ENST00000493683 TIAM2Q8IVF5 1701 aa18.59■□□□□ 0.57
RNF40-203ENST00000493683 SRMP19623 302 aa18.59■□□□□ 0.57
RNF40-203ENST00000493683 GLYR1Q49A26 553 aaPredicted RBP18.59■□□□□ 0.57
RNF40-203ENST00000493683 ADIPOR2Q86V24 386 aa18.59■□□□□ 0.57
RNF40-203ENST00000493683 PIGQQ9BRB3 760 aa18.59■□□□□ 0.57
RNF40-203ENST00000493683 GPR171O14626 319 aa18.59■□□□□ 0.57
RNF40-203ENST00000493683 CTNSO60931 367 aa18.59■□□□□ 0.57
RNF40-203ENST00000493683 RGS11O94810 467 aa18.59■□□□□ 0.57
RNF40-203ENST00000493683 MAKP20794 623 aa18.59■□□□□ 0.57
RNF40-203ENST00000493683 SERPINF1P36955 418 aa18.59■□□□□ 0.57
RNF40-203ENST00000493683 AMBRA1Q9C0C7 1298 aa18.59■□□□□ 0.57
RNF40-203ENST00000493683 LYRM4Q9HD34 91 aa18.59■□□□□ 0.57
RNF40-203ENST00000493683 USP22Q9UPT9 525 aa18.59■□□□□ 0.57
RNF40-203ENST00000493683 IGLV3-10A0A075B6K4 115 aa18.59■□□□□ 0.57
RNF40-203ENST00000493683 CD53P19397 219 aa18.59■□□□□ 0.57
RNF40-203ENST00000493683 IHHQ14623 411 aa18.59■□□□□ 0.57
RNF40-203ENST00000493683 LRRC26Q2I0M4 334 aa18.59■□□□□ 0.57
RNF40-203ENST00000493683 PAN3Q58A45 887 aaKnown RBP18.59■□□□□ 0.57
RNF40-203ENST00000493683 XKR7Q5GH72 579 aa18.59■□□□□ 0.57
RNF40-203ENST00000493683 SLC35D2Q76EJ3 337 aa18.59■□□□□ 0.57
RNF40-203ENST00000493683 OR1S2Q8NGQ3 325 aa18.59■□□□□ 0.57
RNF40-203ENST00000493683 SEMA4CQ9C0C4 833 aa18.59■□□□□ 0.57
RNF40-203ENST00000493683 EIF4E2O60573 245 aaKnown RBP18.58■□□□□ 0.57
RNF40-203ENST00000493683 CT45A6P0DMU7 189 aa18.58■□□□□ 0.57
RNF40-203ENST00000493683 CT45A5P0DMU8 189 aa18.58■□□□□ 0.57
RNF40-203ENST00000493683 CT45A7P0DMV0 189 aa18.58■□□□□ 0.57
RNF40-203ENST00000493683 CT45A8P0DMV1 189 aa18.58■□□□□ 0.57
RNF40-203ENST00000493683 CT45A9P0DMV2 189 aa18.58■□□□□ 0.57
RNF40-203ENST00000493683 LAP3P28838 519 aa18.58■□□□□ 0.57
RNF40-203ENST00000493683 CT45A2Q5DJT8 189 aa18.58■□□□□ 0.57
RNF40-203ENST00000493683 CT45A1Q5HYN5 189 aa18.58■□□□□ 0.57
RNF40-203ENST00000493683 KDM8Q8N371 416 aa18.58■□□□□ 0.57
RNF40-203ENST00000493683 CT45A3Q8NHU0 189 aa18.58■□□□□ 0.57
RNF40-203ENST00000493683 LINC01599Q8WXQ3 324 aa18.58■□□□□ 0.57
RNF40-203ENST00000493683 SLC25A46Q96AG3 418 aa18.58■□□□□ 0.57
RNF40-203ENST00000493683 SEC22CQ9BRL7 303 aa18.58■□□□□ 0.57
RNF40-203ENST00000493683 SEMA6CQ9H3T2 930 aa18.58■□□□□ 0.57
RNF40-203ENST00000493683 RAF1P04049 648 aa18.58■□□□□ 0.57
RNF40-203ENST00000493683 AADACP22760 399 aa18.58■□□□□ 0.57
RNF40-203ENST00000493683 CLDN12P56749 244 aa18.58■□□□□ 0.57
RNF40-203ENST00000493683 MED30Q96HR3 178 aa18.58■□□□□ 0.57
RNF40-203ENST00000493683 FOXN4Q96NZ1 517 aa18.58■□□□□ 0.57
RNF40-203ENST00000493683 YKT6O15498 198 aa18.58■□□□□ 0.56
RNF40-203ENST00000493683 GIPP09681 153 aaPredicted RBP18.58■□□□□ 0.56
RNF40-203ENST00000493683 ASAH1Q13510 395 aa18.58■□□□□ 0.56
RNF40-203ENST00000493683 SHISA6Q6ZSJ9 500 aa18.58■□□□□ 0.56
RNF40-203ENST00000493683 TAS1R1Q7RTX1 841 aa18.58■□□□□ 0.56
RNF40-203ENST00000493683 PLPP6Q8IY26 295 aa18.58■□□□□ 0.56
RNF40-203ENST00000493683 OR2L13Q8N349 312 aa18.58■□□□□ 0.56
RNF40-203ENST00000493683 YIPF5Q969M3 257 aa18.58■□□□□ 0.56
RNF40-203ENST00000493683 EMC9Q9Y3B6 208 aa18.58■□□□□ 0.56
RNF40-203ENST00000493683 SOCS6O14544 535 aa18.58■□□□□ 0.56
RNF40-203ENST00000493683 SCRG1O75711 98 aa18.58■□□□□ 0.56
RNF40-203ENST00000493683 ACHEP22303 614 aa18.58■□□□□ 0.56
RNF40-203ENST00000493683 GABRA2P47869 451 aa18.58■□□□□ 0.56
RNF40-203ENST00000493683 BAXQ07812 192 aa18.58■□□□□ 0.56
RNF40-203ENST00000493683 IAH1Q2TAA2 248 aaPredicted RBP18.58■□□□□ 0.56
RNF40-203ENST00000493683 OR1E3Q8WZA6 343 aa18.58■□□□□ 0.56
RNF40-203ENST00000493683 HHIPQ96QV1 700 aa18.58■□□□□ 0.56
RNF40-203ENST00000493683 NIPSNAP1Q9BPW8 284 aa18.58■□□□□ 0.56
RNF40-203ENST00000493683 NUDT22Q9BRQ3 303 aa18.58■□□□□ 0.56
RNF40-203ENST00000493683 UBQLN3Q9H347 655 aa18.58■□□□□ 0.56
RNF40-203ENST00000493683 SPHK1Q9NYA1 384 aa18.58■□□□□ 0.56
RNF40-203ENST00000493683 ZNF814B7Z6K7 855 aa18.57■□□□□ 0.56
RNF40-203ENST00000493683 GJA4P35212 333 aa18.57■□□□□ 0.56
RNF40-203ENST00000493683 SLC6A11P48066 632 aa18.57■□□□□ 0.56
RNF40-203ENST00000493683 DCDP81605 110 aaKnown RBP18.57■□□□□ 0.56
RNF40-203ENST00000493683 TANGO2Q6ICL3 276 aa18.57■□□□□ 0.56
RNF40-203ENST00000493683 ABHD17CQ6PCB6 329 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms