RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-219ENST00000492602 ZNF317Q96PQ6 595 aaPredicted RBP4.48□□□□□ -1.69
SEC13-219ENST00000492602 ALKBH3Q96Q83 286 aaPredicted RBP4.48□□□□□ -1.69
SEC13-219ENST00000492602 TSPAN32Q96QS1 320 aa4.48□□□□□ -1.69
SEC13-219ENST00000492602 STACQ99469 402 aa4.48□□□□□ -1.69
SEC13-219ENST00000492602 ZBTB18Q99592 522 aa4.48□□□□□ -1.69
SEC13-219ENST00000492602 ACTRT3Q9BYD9 372 aa4.48□□□□□ -1.69
SEC13-219ENST00000492602 NMUR2Q9GZQ4 415 aa4.48□□□□□ -1.69
SEC13-219ENST00000492602 QRSL1Q9H0R6 528 aaKnown RBP4.48□□□□□ -1.69
SEC13-219ENST00000492602 DPAGT1Q9H3H5 408 aa4.48□□□□□ -1.69
SEC13-219ENST00000492602 NELFAQ9H3P2 528 aa4.48□□□□□ -1.69
SEC13-219ENST00000492602 ACOXLQ9NUZ1 547 aa4.48□□□□□ -1.69
SEC13-219ENST00000492602 GIN1Q9NXP7 522 aa4.48□□□□□ -1.69
SEC13-219ENST00000492602 NKIRAS2Q9NYR9 191 aa4.48□□□□□ -1.69
SEC13-219ENST00000492602 ATP6V1HQ9UI12 483 aa4.48□□□□□ -1.69
SEC13-219ENST00000492602 GPR160Q9UJ42 338 aa4.48□□□□□ -1.69
SEC13-219ENST00000492602 TRIM33Q9UPN9 1127 aa4.48□□□□□ -1.69
SEC13-219ENST00000492602 CARD8Q9Y2G2 431 aa4.48□□□□□ -1.69
SEC13-219ENST00000492602 FIS1Q9Y3D6 152 aa4.48□□□□□ -1.69
SEC13-219ENST00000492602 POLR3HQ9Y535 204 aaPredicted RBP4.48□□□□□ -1.69
SEC13-219ENST00000492602 NPTNQ9Y639 398 aa4.48□□□□□ -1.69
SEC13-219ENST00000492602 IGHV2-70DA0A0C4DH43 119 aa4.47□□□□□ -1.69
SEC13-219ENST00000492602 BTBD17A6NE02 478 aa4.47□□□□□ -1.69
SEC13-219ENST00000492602 ZNF503-AS2A6NEH8 195 aa4.47□□□□□ -1.69
SEC13-219ENST00000492602 RNASEK-C17orf49H0YIS7 233 aa4.47□□□□□ -1.69
SEC13-219ENST00000492602 ANKRD28O15084 1053 aa4.47□□□□□ -1.69
SEC13-219ENST00000492602 NPHS1O60500 1241 aa4.47□□□□□ -1.69
SEC13-219ENST00000492602 EIF4E2O60573 245 aaKnown RBP4.47□□□□□ -1.69
SEC13-219ENST00000492602 PLIN3O60664 434 aa4.47□□□□□ -1.69
SEC13-219ENST00000492602 TBX19O60806 448 aa4.47□□□□□ -1.69
SEC13-219ENST00000492602 PEX11AO75192 247 aa4.47□□□□□ -1.69
SEC13-219ENST00000492602 UBOX5O94941 541 aa4.47□□□□□ -1.69
SEC13-219ENST00000492602 FGF4P08620 206 aa4.47□□□□□ -1.69
SEC13-219ENST00000492602 BCKDHAP12694 445 aa4.47□□□□□ -1.69
SEC13-219ENST00000492602 UQCRC2P22695 453 aa4.47□□□□□ -1.69
SEC13-219ENST00000492602 CHI3L1P36222 383 aaPredicted RBP4.47□□□□□ -1.69
SEC13-219ENST00000492602 HTR3AP46098 478 aa4.47□□□□□ -1.69
SEC13-219ENST00000492602 PTDSS1P48651 473 aaKnown RBP4.47□□□□□ -1.69
SEC13-219ENST00000492602 MMP16P51512 607 aa4.47□□□□□ -1.69
SEC13-219ENST00000492602 SUMO3P55854 103 aaPredicted RBP4.47□□□□□ -1.69
SEC13-219ENST00000492602 OR2B6P58173 313 aa4.47□□□□□ -1.69
SEC13-219ENST00000492602 SELENOVP59797 346 aa4.47□□□□□ -1.69
SEC13-219ENST00000492602 FGF12P61328 243 aa4.47□□□□□ -1.69
SEC13-219ENST00000492602 TXNL4AP83876 142 aaKnown RBP4.47□□□□□ -1.69
SEC13-219ENST00000492602 HPCAP84074 193 aa4.47□□□□□ -1.69
SEC13-219ENST00000492602 PAX2Q02962 417 aa4.47□□□□□ -1.69
SEC13-219ENST00000492602 LRRC74AQ0VAA2 488 aa4.47□□□□□ -1.69
SEC13-219ENST00000492602 HNRNPA0Q13151 305 aaKnown RBP4.47□□□□□ -1.69
SEC13-219ENST00000492602 QPRTQ15274 297 aa4.47□□□□□ -1.69
SEC13-219ENST00000492602 SMU1Q2TAY7 513 aa4.47□□□□□ -1.69
SEC13-219ENST00000492602 NDUFAF6Q330K2 333 aa4.47□□□□□ -1.69
SEC13-219ENST00000492602 ZNF385BQ569K4 471 aa4.47□□□□□ -1.69
SEC13-219ENST00000492602 SYT14P1Q58G82 188 aa4.47□□□□□ -1.69
SEC13-219ENST00000492602 C11orf88Q6PI97 169 aa4.47□□□□□ -1.69
SEC13-219ENST00000492602 C6orf89Q6UWU4 347 aa4.47□□□□□ -1.69
SEC13-219ENST00000492602 LHFPL2Q6ZUX7 228 aa4.47□□□□□ -1.69
SEC13-219ENST00000492602 EIF3MQ7L2H7 374 aaKnown RBP4.47□□□□□ -1.69
SEC13-219ENST00000492602 OLIG3Q7RTU3 272 aa4.47□□□□□ -1.69
SEC13-219ENST00000492602 ZNF551Q7Z340 670 aaPredicted RBP4.47□□□□□ -1.69
SEC13-219ENST00000492602 C16orf62Q7Z3J2 963 aa4.47□□□□□ -1.69
SEC13-219ENST00000492602 MDP1Q86V88 176 aa4.47□□□□□ -1.69
SEC13-219ENST00000492602 COMTD1Q86VU5 262 aa4.47□□□□□ -1.69
SEC13-219ENST00000492602 LDLRAD3Q86YD5 345 aa4.47□□□□□ -1.69
SEC13-219ENST00000492602 MUC20Q8N307 709 aaPredicted RBP4.47□□□□□ -1.69
SEC13-219ENST00000492602 FNDC5Q8NAU1 212 aa4.47□□□□□ -1.69
SEC13-219ENST00000492602 PAPD5Q8NDF8 572 aaKnown RBP4.47□□□□□ -1.69
SEC13-219ENST00000492602 MGARPQ8TDB4 240 aa4.47□□□□□ -1.69
SEC13-219ENST00000492602 RAB40AQ8WXH6 277 aa4.47□□□□□ -1.69
SEC13-219ENST00000492602 GATAD2BQ8WXI9 593 aa4.47□□□□□ -1.69
SEC13-219ENST00000492602 PMM1Q92871 262 aa4.47□□□□□ -1.69
SEC13-219ENST00000492602 TUBGCP3Q96CW5 907 aa4.47□□□□□ -1.69
SEC13-219ENST00000492602 ZNF764Q96H86 408 aaPredicted RBP4.47□□□□□ -1.69
SEC13-219ENST00000492602 EGLN2Q96KS0 407 aa4.47□□□□□ -1.69
SEC13-219ENST00000492602 ZIM3Q96PE6 472 aa4.47□□□□□ -1.69
SEC13-219ENST00000492602 TSSK3Q96PN8 268 aa4.47□□□□□ -1.69
SEC13-219ENST00000492602 CITED2Q99967 270 aaPredicted RBP4.47□□□□□ -1.69
SEC13-219ENST00000492602 PCGF1Q9BSM1 259 aa4.47□□□□□ -1.69
SEC13-219ENST00000492602 LMF2Q9BU23 707 aaKnown RBP4.47□□□□□ -1.69
SEC13-219ENST00000492602 LAT2Q9GZY6 243 aa4.47□□□□□ -1.69
SEC13-219ENST00000492602 PPA2Q9H2U2 334 aa4.47□□□□□ -1.69
SEC13-219ENST00000492602 PIGUQ9H490 435 aa4.47□□□□□ -1.69
SEC13-219ENST00000492602 GLIPR2Q9H4G4 154 aa4.47□□□□□ -1.69
SEC13-219ENST00000492602 NANOGQ9H9S0 305 aa4.47□□□□□ -1.69
SEC13-219ENST00000492602 DUSP22Q9NRW4 184 aa4.47□□□□□ -1.69
SEC13-219ENST00000492602 ZCCHC3Q9NUD5 404 aaKnown RBP4.47□□□□□ -1.69
SEC13-219ENST00000492602 NOP53Q9NZM5 478 aaKnown RBP4.47□□□□□ -1.69
SEC13-219ENST00000492602 VPREB3Q9UKI3 123 aa4.47□□□□□ -1.69
SEC13-219ENST00000492602 ZNF232Q9UNY5 417 aa4.47□□□□□ -1.69
SEC13-219ENST00000492602 DSPPQ9NZW4 1301 aa4.46□□□□□ -1.69
SEC13-219ENST00000492602 ALMS1Q8TCU4 4167 aa4.46□□□□□ -1.69
SEC13-219ENST00000492602 A0A0U1RQK1 487 aa4.46□□□□□ -1.7
SEC13-219ENST00000492602 CENPVL1A0A0U1RR11 272 aa4.46□□□□□ -1.7
SEC13-219ENST00000492602 CENPVL3A0A0U1RRI6 287 aa4.46□□□□□ -1.7
SEC13-219ENST00000492602 A0A1W2PPM1 405 aa4.46□□□□□ -1.7
SEC13-219ENST00000492602 A0A1W2PQD3 144 aa4.46□□□□□ -1.7
SEC13-219ENST00000492602 ADARB2-AS1A8MUL3 147 aa4.46□□□□□ -1.7
SEC13-219ENST00000492602 G3V2L1 256 aa4.46□□□□□ -1.7
SEC13-219ENST00000492602 RGS16O15492 202 aaPredicted RBP4.46□□□□□ -1.7
SEC13-219ENST00000492602 ZNF264O43296 627 aa4.46□□□□□ -1.7
SEC13-219ENST00000492602 SPRY3O43610 288 aa4.46□□□□□ -1.7
SEC13-219ENST00000492602 STX11O75558 287 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms