RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 RCE1Q9Y256 329 aa11.28□□□□□ -0.6
HMGN1-220ENST00000492280 VDAC3Q9Y277 283 aa11.28□□□□□ -0.6
HMGN1-220ENST00000492280 FITM1A5D6W6 292 aa11.27□□□□□ -0.61
HMGN1-220ENST00000492280 UPK3AO75631 287 aa11.27□□□□□ -0.61
HMGN1-220ENST00000492280 MPZL1O95297 269 aa11.27□□□□□ -0.61
HMGN1-220ENST00000492280 YES1P07947 543 aa11.27□□□□□ -0.61
HMGN1-220ENST00000492280 SMAD4Q13485 552 aaKnown RBP11.27□□□□□ -0.61
HMGN1-220ENST00000492280 PYHIN1Q6K0P9 492 aa11.27□□□□□ -0.61
HMGN1-220ENST00000492280 GRPEL2Q8TAA5 225 aa11.27□□□□□ -0.61
HMGN1-220ENST00000492280 DUSP19Q8WTR2 217 aa11.27□□□□□ -0.61
HMGN1-220ENST00000492280 MAP6Q96JE9 813 aa11.27□□□□□ -0.61
HMGN1-220ENST00000492280 WWTR1Q9GZV5 400 aa11.27□□□□□ -0.61
HMGN1-220ENST00000492280 SLCO1C1Q9NYB5 712 aa11.27□□□□□ -0.61
HMGN1-220ENST00000492280 SLC22A13Q9Y226 551 aa11.27□□□□□ -0.61
HMGN1-220ENST00000492280 ZNF281Q9Y2X9 895 aa11.27□□□□□ -0.61
HMGN1-220ENST00000492280 HSPB11Q9Y547 144 aa11.27□□□□□ -0.61
HMGN1-220ENST00000492280 GPR179Q6PRD1 2367 aa11.27□□□□□ -0.61
HMGN1-220ENST00000492280 TCRBV16S1A1N1A0A5B0 115 aa11.27□□□□□ -0.61
HMGN1-220ENST00000492280 MEIS3P1A6NDR6 274 aa11.27□□□□□ -0.61
HMGN1-220ENST00000492280 FRG2CA6NGY1 282 aa11.27□□□□□ -0.61
HMGN1-220ENST00000492280 IFI6P09912 130 aa11.27□□□□□ -0.61
HMGN1-220ENST00000492280 PNMTP11086 282 aa11.27□□□□□ -0.61
HMGN1-220ENST00000492280 GDNFP39905 211 aa11.27□□□□□ -0.61
HMGN1-220ENST00000492280 FAPQ12884 760 aa11.27□□□□□ -0.61
HMGN1-220ENST00000492280 TRAM1Q15629 374 aa11.27□□□□□ -0.61
HMGN1-220ENST00000492280 FAM199XQ6PEV8 388 aaPredicted RBP11.27□□□□□ -0.61
HMGN1-220ENST00000492280 TMPRSS12Q86WS5 348 aa11.27□□□□□ -0.61
HMGN1-220ENST00000492280 C17orf82Q86X59 251 aaPredicted RBP11.27□□□□□ -0.61
HMGN1-220ENST00000492280 SDR16C5Q8N3Y7 309 aa11.27□□□□□ -0.61
HMGN1-220ENST00000492280 OR11H7Q8NGC8 314 aa11.27□□□□□ -0.61
HMGN1-220ENST00000492280 OR52I2Q8NH67 350 aa11.27□□□□□ -0.61
HMGN1-220ENST00000492280 C1orf216Q8TAB5 229 aa11.27□□□□□ -0.61
HMGN1-220ENST00000492280 ADAMTS18Q8TE60 1221 aa11.27□□□□□ -0.61
HMGN1-220ENST00000492280 AKAP1Q92667 903 aaKnown RBP eCLIP11.27□□□□□ -0.61
HMGN1-220ENST00000492280 KCTD12Q96CX2 325 aaKnown RBP11.27□□□□□ -0.61
HMGN1-220ENST00000492280 TAS2R5Q9NYW4 299 aa11.27□□□□□ -0.61
HMGN1-220ENST00000492280 PCDHGA9Q9Y5G4 932 aaKnown RBP11.27□□□□□ -0.61
HMGN1-220ENST00000492280 RGS13O14921 159 aa11.26□□□□□ -0.61
HMGN1-220ENST00000492280 SERPINA3P01011 423 aa11.26□□□□□ -0.61
HMGN1-220ENST00000492280 HLA-DMAP28067 261 aa11.26□□□□□ -0.61
HMGN1-220ENST00000492280 FMODQ06828 376 aa11.26□□□□□ -0.61
HMGN1-220ENST00000492280 ZNF684Q5T5D7 378 aa11.26□□□□□ -0.61
HMGN1-220ENST00000492280 SLC6A19Q695T7 634 aa11.26□□□□□ -0.61
HMGN1-220ENST00000492280 LYPD8Q6UX82 237 aa11.26□□□□□ -0.61
HMGN1-220ENST00000492280 FAM220AQ7Z4H9 259 aa11.26□□□□□ -0.61
HMGN1-220ENST00000492280 SLITRK4Q8IW52 837 aa11.26□□□□□ -0.61
HMGN1-220ENST00000492280 GLB1L2Q8IW92 636 aa11.26□□□□□ -0.61
HMGN1-220ENST00000492280 NSMAFQ92636 917 aa11.26□□□□□ -0.61
HMGN1-220ENST00000492280 SLC22A11Q9NSA0 550 aa11.26□□□□□ -0.61
HMGN1-220ENST00000492280 NPFFR2Q9Y5X5 522 aa11.26□□□□□ -0.61
HMGN1-220ENST00000492280 TRAV1-2A0A0B4J238 106 aa11.26□□□□□ -0.61
HMGN1-220ENST00000492280 CPED1A4D0V7 1026 aa11.26□□□□□ -0.61
HMGN1-220ENST00000492280 IFITM5A6NNB3 132 aa11.26□□□□□ -0.61
HMGN1-220ENST00000492280 FABP7O15540 132 aa11.26□□□□□ -0.61
HMGN1-220ENST00000492280 TCRBP04435 133 aa11.26□□□□□ -0.61
HMGN1-220ENST00000492280 HIST1H2ABP04908 130 aa11.26□□□□□ -0.61
HMGN1-220ENST00000492280 ADH7P40394 386 aa11.26□□□□□ -0.61
HMGN1-220ENST00000492280 FBXW4P57775 412 aa11.26□□□□□ -0.61
HMGN1-220ENST00000492280 ELAVL1Q15717 326 aaKnown RBP11.26□□□□□ -0.61
HMGN1-220ENST00000492280 ACKR1Q16570 336 aa11.26□□□□□ -0.61
HMGN1-220ENST00000492280 ZSWIM7Q19AV6 140 aa11.26□□□□□ -0.61
HMGN1-220ENST00000492280 HIST3H2AQ7L7L0 130 aa11.26□□□□□ -0.61
HMGN1-220ENST00000492280 PRSS35Q8N3Z0 413 aa11.26□□□□□ -0.61
HMGN1-220ENST00000492280 ZNF676Q8N7Q3 588 aa11.26□□□□□ -0.61
HMGN1-220ENST00000492280 OR7G1Q8NGA0 311 aa11.26□□□□□ -0.61
HMGN1-220ENST00000492280 OR5AK2Q8NH90 309 aa11.26□□□□□ -0.61
HMGN1-220ENST00000492280 METTL21AQ8WXB1 218 aa11.26□□□□□ -0.61
HMGN1-220ENST00000492280 HIST1H2ACQ93077 130 aa11.26□□□□□ -0.61
HMGN1-220ENST00000492280 C8orf44Q96CB5 159 aa11.26□□□□□ -0.61
HMGN1-220ENST00000492280 GPX7Q96SL4 187 aaPredicted RBP11.26□□□□□ -0.61
HMGN1-220ENST00000492280 PTDSS2Q9BVG9 487 aa11.26□□□□□ -0.61
HMGN1-220ENST00000492280 CACNG6Q9BXT2 260 aa11.26□□□□□ -0.61
HMGN1-220ENST00000492280 SLC7A5P2Q9GIP4 190 aa11.26□□□□□ -0.61
HMGN1-220ENST00000492280 MYEF2Q9P2K5 600 aaKnown RBP11.26□□□□□ -0.61
HMGN1-220ENST00000492280 AHCTF1Q8WYP5 2266 aa11.26□□□□□ -0.61
HMGN1-220ENST00000492280 FAM172BPA6NC97 362 aa11.25□□□□□ -0.61
HMGN1-220ENST00000492280 DUX1O43812 170 aa11.25□□□□□ -0.61
HMGN1-220ENST00000492280 SUSD5O60279 629 aa11.25□□□□□ -0.61
HMGN1-220ENST00000492280 SLC16A7O60669 478 aa11.25□□□□□ -0.61
HMGN1-220ENST00000492280 SLC25A12O75746 678 aa11.25□□□□□ -0.61
HMGN1-220ENST00000492280 TOXO94900 526 aa11.25□□□□□ -0.61
HMGN1-220ENST00000492280 UBL3O95164 117 aa11.25□□□□□ -0.61
HMGN1-220ENST00000492280 ABHD16AO95870 558 aa11.25□□□□□ -0.61
HMGN1-220ENST00000492280 SPARCP09486 303 aa11.25□□□□□ -0.61
HMGN1-220ENST00000492280 TRAPPC2P0DI81 140 aa11.25□□□□□ -0.61
HMGN1-220ENST00000492280 TRAPPC2BP0DI82 140 aa11.25□□□□□ -0.61
HMGN1-220ENST00000492280 GIMD1P0DJR0 217 aa11.25□□□□□ -0.61
HMGN1-220ENST00000492280 CTLA4P16410 223 aa11.25□□□□□ -0.61
HMGN1-220ENST00000492280 CD53P19397 219 aa11.25□□□□□ -0.61
HMGN1-220ENST00000492280 BIKQ13323 160 aa11.25□□□□□ -0.61
HMGN1-220ENST00000492280 INPP5JQ15735 1006 aaPredicted RBP11.25□□□□□ -0.61
HMGN1-220ENST00000492280 YOD1Q5VVQ6 348 aaPredicted RBP11.25□□□□□ -0.61
HMGN1-220ENST00000492280 LAMTOR1Q6IAA8 161 aa11.25□□□□□ -0.61
HMGN1-220ENST00000492280 OR7E24Q6IFN5 339 aa11.25□□□□□ -0.61
HMGN1-220ENST00000492280 STAC2Q6ZMT1 411 aa11.25□□□□□ -0.61
HMGN1-220ENST00000492280 SLC16A9Q7RTY1 509 aa11.25□□□□□ -0.61
HMGN1-220ENST00000492280 OR2I1PQ8NGU4 316 aa11.25□□□□□ -0.61
HMGN1-220ENST00000492280 SYNPRQ8TBG9 265 aa11.25□□□□□ -0.61
HMGN1-220ENST00000492280 PCNPQ8WW12 178 aaKnown RBP11.25□□□□□ -0.61
HMGN1-220ENST00000492280 TMEM106AQ96A25 262 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms