RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 CIARTQ8N365 385 aaPredicted RBP21.51■■□□□ 1.03
UPF3A-209ENST00000492270 RBM15BQ8NDT2 890 aaKnown RBP21.51■■□□□ 1.03
UPF3A-209ENST00000492270 OR6N1Q8NGY5 312 aa21.51■■□□□ 1.03
UPF3A-209ENST00000492270 HSH2DQ96JZ2 352 aa21.51■■□□□ 1.03
UPF3A-209ENST00000492270 LRR1Q96L50 414 aa21.51■■□□□ 1.03
UPF3A-209ENST00000492270 SLC38A2Q96QD8 506 aa21.51■■□□□ 1.03
UPF3A-209ENST00000492270 SMR3AQ99954 134 aa21.51■■□□□ 1.03
UPF3A-209ENST00000492270 DHRS9Q9BPW9 319 aa21.51■■□□□ 1.03
UPF3A-209ENST00000492270 RHCGQ9UBD6 479 aa21.51■■□□□ 1.03
UPF3A-209ENST00000492270 ZNF99A8MXY4 864 aaPredicted RBP21.5■■□□□ 1.03
UPF3A-209ENST00000492270 BLOC1S5-TXNDC5H3BN57 136 aa21.5■■□□□ 1.03
UPF3A-209ENST00000492270 OR7A10O76100 309 aa21.5■■□□□ 1.03
UPF3A-209ENST00000492270 HIST1H2ABP04908 130 aa21.5■■□□□ 1.03
UPF3A-209ENST00000492270 THRBP10828 461 aa21.5■■□□□ 1.03
UPF3A-209ENST00000492270 FOSL1P15407 271 aa21.5■■□□□ 1.03
UPF3A-209ENST00000492270 TTKP33981 857 aa21.5■■□□□ 1.03
UPF3A-209ENST00000492270 HIST3H2AQ7L7L0 130 aa21.5■■□□□ 1.03
UPF3A-209ENST00000492270 PIGWQ7Z7B1 504 aa21.5■■□□□ 1.03
UPF3A-209ENST00000492270 DEPDC4Q8N2C3 294 aa21.5■■□□□ 1.03
UPF3A-209ENST00000492270 HIST1H2ACQ93077 130 aa21.5■■□□□ 1.03
UPF3A-209ENST00000492270 SGTBQ96EQ0 304 aa21.5■■□□□ 1.03
UPF3A-209ENST00000492270 C18orf12Q96KH6 178 aa21.5■■□□□ 1.03
UPF3A-209ENST00000492270 ULBP2Q9BZM5 246 aa21.5■■□□□ 1.03
UPF3A-209ENST00000492270 FAIMQ9NVQ4 179 aa21.5■■□□□ 1.03
UPF3A-209ENST00000492270 EGFL7Q9UHF1 273 aa21.5■■□□□ 1.03
UPF3A-209ENST00000492270 NDUFS7O75251 213 aa21.49■■□□□ 1.03
UPF3A-209ENST00000492270 IFNW1P05000 195 aa21.49■■□□□ 1.03
UPF3A-209ENST00000492270 CELA3BP08861 270 aa21.49■■□□□ 1.03
UPF3A-209ENST00000492270 FUT1P19526 365 aa21.49■■□□□ 1.03
UPF3A-209ENST00000492270 CSNK1A1P48729 337 aa21.49■■□□□ 1.03
UPF3A-209ENST00000492270 RPL18Q07020 188 aaKnown RBP21.49■■□□□ 1.03
UPF3A-209ENST00000492270 IFI44LQ53G44 452 aa21.49■■□□□ 1.03
UPF3A-209ENST00000492270 RNF148Q8N7C7 305 aa21.49■■□□□ 1.03
UPF3A-209ENST00000492270 FAM162AQ96A26 154 aa21.49■■□□□ 1.03
UPF3A-209ENST00000492270 SPAG4Q9NPE6 437 aa21.49■■□□□ 1.03
UPF3A-209ENST00000492270 B3GAT2Q9NPZ5 323 aa21.49■■□□□ 1.03
UPF3A-209ENST00000492270 MAN2C1Q9NTJ4 1040 aa21.49■■□□□ 1.03
UPF3A-209ENST00000492270 CRNNQ9UBG3 495 aaPredicted RBP21.49■■□□□ 1.03
UPF3A-209ENST00000492270 MED31Q9Y3C7 131 aa21.49■■□□□ 1.03
UPF3A-209ENST00000492270 ARFGEF3Q5TH69 2177 aa21.48■■□□□ 1.03
UPF3A-209ENST00000492270 H7C1Q1 480 aa21.48■■□□□ 1.03
UPF3A-209ENST00000492270 FFAR1O14842 300 aa21.48■■□□□ 1.03
UPF3A-209ENST00000492270 F13BP05160 661 aa21.48■■□□□ 1.03
UPF3A-209ENST00000492270 CECR9P0C854 216 aa21.48■■□□□ 1.03
UPF3A-209ENST00000492270 HOXB1P14653 301 aaPredicted RBP21.48■■□□□ 1.03
UPF3A-209ENST00000492270 FABP6P51161 128 aa21.48■■□□□ 1.03
UPF3A-209ENST00000492270 ST3GAL3Q11203 375 aa21.48■■□□□ 1.03
UPF3A-209ENST00000492270 AGAP6Q5VW22 663 aa21.48■■□□□ 1.03
UPF3A-209ENST00000492270 C11orf71Q6IPW1 123 aa21.48■■□□□ 1.03
UPF3A-209ENST00000492270 OFCC1Q8IZS5 231 aa21.48■■□□□ 1.03
UPF3A-209ENST00000492270 OR6X1Q8NH79 312 aa21.48■■□□□ 1.03
UPF3A-209ENST00000492270 GEMIN6Q8WXD5 167 aaKnown RBP21.48■■□□□ 1.03
UPF3A-209ENST00000492270 TMEM54Q969K7 222 aa21.48■■□□□ 1.03
UPF3A-209ENST00000492270 ADAD1Q96M93 576 aaKnown RBP21.48■■□□□ 1.03
UPF3A-209ENST00000492270 HS6ST2Q96MM7 605 aa21.48■■□□□ 1.03
UPF3A-209ENST00000492270 ADA2Q9NZK5 511 aa21.48■■□□□ 1.03
UPF3A-209ENST00000492270 GDF2Q9UK05 429 aaPredicted RBP21.48■■□□□ 1.03
UPF3A-209ENST00000492270 ARL2BPQ9Y2Y0 163 aa21.48■■□□□ 1.03
UPF3A-209ENST00000492270 C2CD3Q4AC94 2353 aa21.48■■□□□ 1.03
UPF3A-209ENST00000492270 NF1P21359 2839 aa21.47■■□□□ 1.03
UPF3A-209ENST00000492270 NDUFAB1O14561 156 aa21.47■■□□□ 1.03
UPF3A-209ENST00000492270 IGF2P01344 180 aa21.47■■□□□ 1.03
UPF3A-209ENST00000492270 IGLV1-44P01699 117 aa21.47■■□□□ 1.03
UPF3A-209ENST00000492270 IGHV4-39P01824 125 aa21.47■■□□□ 1.03
UPF3A-209ENST00000492270 INHBBP09529 407 aa21.47■■□□□ 1.03
UPF3A-209ENST00000492270 B4GALT1P15291 398 aa21.47■■□□□ 1.03
UPF3A-209ENST00000492270 AQP2P41181 271 aa21.47■■□□□ 1.03
UPF3A-209ENST00000492270 CAPZA2P47755 286 aa21.47■■□□□ 1.03
UPF3A-209ENST00000492270 FKBP9P1Q75LS8 142 aa21.47■■□□□ 1.03
UPF3A-209ENST00000492270 MEX3DQ86XN8 651 aaKnown RBP21.47■■□□□ 1.03
UPF3A-209ENST00000492270 MUC15Q8N387 334 aa21.47■■□□□ 1.03
UPF3A-209ENST00000492270 FAM156AQ8NDB6 213 aa21.47■■□□□ 1.03
UPF3A-209ENST00000492270 MOSPD2Q8NHP6 518 aa21.47■■□□□ 1.03
UPF3A-209ENST00000492270 TRMT61AQ96FX7 289 aaKnown RBP21.47■■□□□ 1.03
UPF3A-209ENST00000492270 GRIP2Q9C0E4 1043 aa21.47■■□□□ 1.03
UPF3A-209ENST00000492270 NOX3Q9HBY0 568 aa21.47■■□□□ 1.03
UPF3A-209ENST00000492270 ARL8BQ9NVJ2 186 aa21.47■■□□□ 1.03
UPF3A-209ENST00000492270 ZANQ9Y493 2812 aa21.47■■□□□ 1.03
UPF3A-209ENST00000492270 CR1P17927 2039 aa21.46■■□□□ 1.03
UPF3A-209ENST00000492270 SMAD7O15105 426 aaKnown RBP21.46■■□□□ 1.03
UPF3A-209ENST00000492270 IGKV3-15P01624 115 aa21.46■■□□□ 1.03
UPF3A-209ENST00000492270 CALCRP30988 508 aa21.46■■□□□ 1.03
UPF3A-209ENST00000492270 IDH3GP51553 393 aaPredicted RBP21.46■■□□□ 1.03
UPF3A-209ENST00000492270 NAAAQ02083 359 aa21.46■■□□□ 1.03
UPF3A-209ENST00000492270 ZNF813Q6ZN06 617 aa21.46■■□□□ 1.03
UPF3A-209ENST00000492270 TSEN54Q7Z6J9 526 aaKnown RBP21.46■■□□□ 1.03
UPF3A-209ENST00000492270 MDP1Q86V88 176 aa21.46■■□□□ 1.03
UPF3A-209ENST00000492270 FBXL14Q8N1E6 418 aa21.46■■□□□ 1.03
UPF3A-209ENST00000492270 COX4I2Q96KJ9 171 aa21.46■■□□□ 1.03
UPF3A-209ENST00000492270 FNDC11Q9BVV2 318 aa21.46■■□□□ 1.03
UPF3A-209ENST00000492270 CACNG6Q9BXT2 260 aa21.46■■□□□ 1.03
UPF3A-209ENST00000492270 CBLN4Q9NTU7 201 aa21.46■■□□□ 1.03
UPF3A-209ENST00000492270 GLTPQ9NZD2 209 aa21.46■■□□□ 1.03
UPF3A-209ENST00000492270 POFUT2Q9Y2G5 429 aa21.46■■□□□ 1.03
UPF3A-209ENST00000492270 ZFHX3Q15911 3703 aa21.46■■□□□ 1.03
UPF3A-209ENST00000492270 PRSS23O95084 383 aa21.45■■□□□ 1.02
UPF3A-209ENST00000492270 HLA-HP01893 362 aa21.45■■□□□ 1.02
UPF3A-209ENST00000492270 TSPAN19P0C672 248 aa21.45■■□□□ 1.02
UPF3A-209ENST00000492270 PGA4P0DJD7 388 aa21.45■■□□□ 1.02
UPF3A-209ENST00000492270 PGA3P0DJD8 388 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms