RNA–Protein interactions for RNA: ENST00000492170.1

MRPL55-231, Transcript of mitochondrial ribosomal protein L55, human

TSL 5

Gene MRPL55, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-231	ENST00000492170	DHDDS	Q86SQ9	333 aa		13.27	□□□□□ -0.29
MRPL55-231	ENST00000492170	COMTD1	Q86VU5	262 aa		13.27	□□□□□ -0.29
MRPL55-231	ENST00000492170	C20orf196	Q8IYI0	205 aa		13.27	□□□□□ -0.29
MRPL55-231	ENST00000492170	C10orf111	Q8N326	155 aa		13.27	□□□□□ -0.29
MRPL55-231	ENST00000492170	SCAI	Q8N9R8	606 aa		13.27	□□□□□ -0.29
MRPL55-231	ENST00000492170	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	13.27	□□□□□ -0.29
MRPL55-231	ENST00000492170	ZNF607	Q96SK3	696 aa		13.27	□□□□□ -0.29
MRPL55-231	ENST00000492170	DOK1	Q99704	481 aa		13.27	□□□□□ -0.29
MRPL55-231	ENST00000492170	CPPED1	Q9BRF8	314 aa	Predicted RBP	13.27	□□□□□ -0.29
MRPL55-231	ENST00000492170	NOX3	Q9HBY0	568 aa		13.27	□□□□□ -0.29
MRPL55-231	ENST00000492170	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	13.27	□□□□□ -0.29	2e-6	■■■■□ 25.8
MRPL55-231	ENST00000492170		A0A087WUJ7	227 aa		13.26	□□□□□ -0.29
MRPL55-231	ENST00000492170		A0A0B4J2E0	115 aa		13.26	□□□□□ -0.29
MRPL55-231	ENST00000492170		A0A1B0GX12	115 aa		13.26	□□□□□ -0.29
MRPL55-231	ENST00000492170	GMNC	A6NCL1	334 aa		13.26	□□□□□ -0.29
MRPL55-231	ENST00000492170	BBIP1	A8MTZ0	92 aa		13.26	□□□□□ -0.29
MRPL55-231	ENST00000492170	SNX3	O60493	162 aa		13.26	□□□□□ -0.29
MRPL55-231	ENST00000492170	TPST1	O60507	370 aa		13.26	□□□□□ -0.29
MRPL55-231	ENST00000492170	SERPINB7	O75635	380 aa		13.26	□□□□□ -0.29
MRPL55-231	ENST00000492170	CD79A	P11912	226 aa		13.26	□□□□□ -0.29
MRPL55-231	ENST00000492170	SLC6A2	P23975	617 aa		13.26	□□□□□ -0.29
MRPL55-231	ENST00000492170	GIF	P27352	417 aa		13.26	□□□□□ -0.29
MRPL55-231	ENST00000492170	CHN2	P52757	468 aa		13.26	□□□□□ -0.29
MRPL55-231	ENST00000492170	GNGT1	P63211	74 aa		13.26	□□□□□ -0.29
MRPL55-231	ENST00000492170	SCARB2	Q14108	478 aa		13.26	□□□□□ -0.29
MRPL55-231	ENST00000492170	MAPRE2	Q15555	327 aa		13.26	□□□□□ -0.29
MRPL55-231	ENST00000492170	OR1Q1	Q15612	314 aa		13.26	□□□□□ -0.29
MRPL55-231	ENST00000492170	ADRM1	Q16186	407 aa		13.26	□□□□□ -0.29
MRPL55-231	ENST00000492170	GSG1	Q2KHT4	349 aa		13.26	□□□□□ -0.29
MRPL55-231	ENST00000492170	GLIPR1L2	Q4G1C9	344 aa		13.26	□□□□□ -0.29
MRPL55-231	ENST00000492170	RUNDC3A	Q59EK9	446 aa		13.26	□□□□□ -0.29
MRPL55-231	ENST00000492170	KRT80	Q6KB66	452 aa		13.26	□□□□□ -0.29
MRPL55-231	ENST00000492170	RANBP3L	Q86VV4	465 aa	Predicted RBP	13.26	□□□□□ -0.29
MRPL55-231	ENST00000492170	SNX32	Q86XE0	403 aa		13.26	□□□□□ -0.29
MRPL55-231	ENST00000492170	SLC41A3	Q96GZ6	507 aa		13.26	□□□□□ -0.29
MRPL55-231	ENST00000492170	LRR1	Q96L50	414 aa		13.26	□□□□□ -0.29
MRPL55-231	ENST00000492170	CGREF1	Q99674	301 aa		13.26	□□□□□ -0.29
MRPL55-231	ENST00000492170	EMC6	Q9BV81	110 aa		13.26	□□□□□ -0.29
MRPL55-231	ENST00000492170	RSPO3	Q9BXY4	272 aa	Predicted RBP	13.26	□□□□□ -0.29
MRPL55-231	ENST00000492170	NSRP1	Q9H0G5	558 aa	Known RBP	13.26	□□□□□ -0.29
MRPL55-231	ENST00000492170	TMEM38A	Q9H6F2	299 aa		13.26	□□□□□ -0.29
MRPL55-231	ENST00000492170	EVA1A	Q9H8M9	152 aa		13.26	□□□□□ -0.29
MRPL55-231	ENST00000492170	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	13.26	□□□□□ -0.29
MRPL55-231	ENST00000492170	POFUT2	Q9Y2G5	429 aa		13.26	□□□□□ -0.29
MRPL55-231	ENST00000492170	CMAHP	Q9Y471	501 aa		13.26	□□□□□ -0.29
MRPL55-231	ENST00000492170	NOX1	Q9Y5S8	564 aa		13.26	□□□□□ -0.29
MRPL55-231	ENST00000492170	TMEM129	A0AVI4	362 aa		13.25	□□□□□ -0.29
MRPL55-231	ENST00000492170	SH3PXD2B	A1X283	911 aa		13.25	□□□□□ -0.29
MRPL55-231	ENST00000492170	LRP5L	A4QPB2	252 aa		13.25	□□□□□ -0.29
MRPL55-231	ENST00000492170	EVPLL	A8MZ36	301 aa		13.25	□□□□□ -0.29
MRPL55-231	ENST00000492170	MS4A18	H0YCH9	400 aa		13.25	□□□□□ -0.29
MRPL55-231	ENST00000492170	HPR	P00739	348 aa		13.25	□□□□□ -0.29
MRPL55-231	ENST00000492170	HLA-H	P01893	362 aa		13.25	□□□□□ -0.29
MRPL55-231	ENST00000492170	BGLAP	P02818	100 aa		13.25	□□□□□ -0.29
MRPL55-231	ENST00000492170	HLA-DOB	P13765	273 aa		13.25	□□□□□ -0.29
MRPL55-231	ENST00000492170	AQP1	P29972	269 aa		13.25	□□□□□ -0.29
MRPL55-231	ENST00000492170	PUDP	Q08623	228 aa		13.25	□□□□□ -0.29
MRPL55-231	ENST00000492170	PMS2P3	Q13401	168 aa		13.25	□□□□□ -0.29
MRPL55-231	ENST00000492170	CR1L	Q2VPA4	569 aa		13.25	□□□□□ -0.29
MRPL55-231	ENST00000492170	MS4A18	Q3C1V0	323 aa		13.25	□□□□□ -0.29
MRPL55-231	ENST00000492170	PHYHD1	Q5SRE7	291 aa		13.25	□□□□□ -0.29
MRPL55-231	ENST00000492170	SWT1	Q5T5J6	900 aa	Known RBP	13.25	□□□□□ -0.29
MRPL55-231	ENST00000492170	ZNF813	Q6ZN06	617 aa		13.25	□□□□□ -0.29
MRPL55-231	ENST00000492170	ARMC8	Q8IUR7	673 aa		13.25	□□□□□ -0.29
MRPL55-231	ENST00000492170	CDK20	Q8IZL9	346 aa		13.25	□□□□□ -0.29
MRPL55-231	ENST00000492170	ZCCHC24	Q8N2G6	241 aa	Known RBP	13.25	□□□□□ -0.29
MRPL55-231	ENST00000492170	ZNF786	Q8N393	782 aa		13.25	□□□□□ -0.29
MRPL55-231	ENST00000492170	C10orf53	Q8N6V4	93 aa		13.25	□□□□□ -0.29
MRPL55-231	ENST00000492170	HIPK4	Q8NE63	616 aa		13.25	□□□□□ -0.29
MRPL55-231	ENST00000492170	UBASH3B	Q8TF42	649 aa		13.25	□□□□□ -0.29
MRPL55-231	ENST00000492170	HPS1	Q92902	700 aa		13.25	□□□□□ -0.29
MRPL55-231	ENST00000492170	ELAC2	Q9BQ52	826 aa	Known RBP	13.25	□□□□□ -0.29
MRPL55-231	ENST00000492170	TMEM43	Q9BTV4	400 aa		13.25	□□□□□ -0.29
MRPL55-231	ENST00000492170	C19orf24	Q9BVV8	132 aa		13.25	□□□□□ -0.29
MRPL55-231	ENST00000492170	ULBP2	Q9BZM5	246 aa		13.25	□□□□□ -0.29
MRPL55-231	ENST00000492170	MED29	Q9NX70	200 aa		13.25	□□□□□ -0.29
MRPL55-231	ENST00000492170	MRPL39	Q9NYK5	338 aa	Known RBP	13.25	□□□□□ -0.29
MRPL55-231	ENST00000492170	ANGPT4	Q9Y264	503 aa		13.25	□□□□□ -0.29
MRPL55-231	ENST00000492170	SPEF1	Q9Y4P9	236 aa		13.25	□□□□□ -0.29
MRPL55-231	ENST00000492170	CAPN7	Q9Y6W3	813 aa		13.25	□□□□□ -0.29
MRPL55-231	ENST00000492170	ZNF726	A6NNF4	738 aa		13.24	□□□□□ -0.29
MRPL55-231	ENST00000492170	FXYD1	O00168	92 aa		13.24	□□□□□ -0.29
MRPL55-231	ENST00000492170	CCDC22	O60826	627 aa		13.24	□□□□□ -0.29
MRPL55-231	ENST00000492170	ADRA2A	P08913	450 aa		13.24	□□□□□ -0.29
MRPL55-231	ENST00000492170	TACSTD2	P09758	323 aa		13.24	□□□□□ -0.29
MRPL55-231	ENST00000492170	IFNGR1	P15260	489 aa		13.24	□□□□□ -0.29
MRPL55-231	ENST00000492170	NR4A1	P22736	598 aa		13.24	□□□□□ -0.29
MRPL55-231	ENST00000492170	AHCY	P23526	432 aa		13.24	□□□□□ -0.29
MRPL55-231	ENST00000492170	APEX1	P27695	318 aa	Known RBP	13.24	□□□□□ -0.29
MRPL55-231	ENST00000492170	NFYC	Q13952	458 aa		13.24	□□□□□ -0.29
MRPL55-231	ENST00000492170	TRMT5	Q32P41	509 aa	Known RBP	13.24	□□□□□ -0.29
MRPL55-231	ENST00000492170	REP15	Q6BDI9	236 aa		13.24	□□□□□ -0.29
MRPL55-231	ENST00000492170	ZNF627	Q7L945	461 aa		13.24	□□□□□ -0.29
MRPL55-231	ENST00000492170	OR6N1	Q8NGY5	312 aa		13.24	□□□□□ -0.29
MRPL55-231	ENST00000492170	MRPL24	Q96A35	216 aa	Known RBP	13.24	□□□□□ -0.29
MRPL55-231	ENST00000492170	MOGAT1	Q96PD6	335 aa		13.24	□□□□□ -0.29
MRPL55-231	ENST00000492170	TPK1	Q9H3S4	243 aa		13.24	□□□□□ -0.29
MRPL55-231	ENST00000492170	B3GNT2	Q9NY97	397 aa		13.24	□□□□□ -0.29
MRPL55-231	ENST00000492170	ARMCX1	Q9P291	453 aa		13.24	□□□□□ -0.29
MRPL55-231	ENST00000492170		M0R233	179 aa		13.23	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms