RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 MCIDASD6RGH6 385 aa14.42□□□□□ -0.1
PDLIM2-217ENST00000491330 C11orf98E9PRG8 122 aa14.42□□□□□ -0.1
PDLIM2-217ENST00000491330 TRAF3IP2O43734 574 aaPredicted RBP14.42□□□□□ -0.1
PDLIM2-217ENST00000491330 CD5LO43866 347 aa14.42□□□□□ -0.1
PDLIM2-217ENST00000491330 SNX3O60493 162 aa14.42□□□□□ -0.1
PDLIM2-217ENST00000491330 NDUFS7O75251 213 aa14.42□□□□□ -0.1
PDLIM2-217ENST00000491330 UBL3O95164 117 aa14.42□□□□□ -0.1
PDLIM2-217ENST00000491330 CH25HO95992 272 aa14.42□□□□□ -0.1
PDLIM2-217ENST00000491330 BCL10O95999 233 aa14.42□□□□□ -0.1
PDLIM2-217ENST00000491330 IGKV3-15P01624 115 aa14.42□□□□□ -0.1
PDLIM2-217ENST00000491330 OR4A8P0C604 315 aa14.42□□□□□ -0.1
PDLIM2-217ENST00000491330 CECR9P0C854 216 aa14.42□□□□□ -0.1
PDLIM2-217ENST00000491330 IDH3GP51553 393 aaPredicted RBP14.42□□□□□ -0.1
PDLIM2-217ENST00000491330 RPS23P62266 143 aaKnown RBP14.42□□□□□ -0.1
PDLIM2-217ENST00000491330 LGALS3BPQ08380 585 aa14.42□□□□□ -0.1
PDLIM2-217ENST00000491330 CARTPTQ16568 116 aa14.42□□□□□ -0.1
PDLIM2-217ENST00000491330 GKAP1Q5VSY0 366 aaPredicted RBP14.42□□□□□ -0.1
PDLIM2-217ENST00000491330 B3GLCTQ6Y288 498 aa14.42□□□□□ -0.1
PDLIM2-217ENST00000491330 PIWIL3Q7Z3Z3 882 aaKnown RBP14.42□□□□□ -0.1
PDLIM2-217ENST00000491330 NANOGNBQ7Z5D8 188 aa14.42□□□□□ -0.1
PDLIM2-217ENST00000491330 CPLX4Q7Z7G2 160 aa14.42□□□□□ -0.1
PDLIM2-217ENST00000491330 TMEM123Q8N131 208 aa14.42□□□□□ -0.1
PDLIM2-217ENST00000491330 NUP37Q8NFH4 326 aa14.42□□□□□ -0.1
PDLIM2-217ENST00000491330 OR2T12Q8NG77 320 aa14.42□□□□□ -0.1
PDLIM2-217ENST00000491330 ZNF566Q969W8 418 aa14.42□□□□□ -0.1
PDLIM2-217ENST00000491330 EMC6Q9BV81 110 aa14.42□□□□□ -0.1
PDLIM2-217ENST00000491330 KCNN2Q9H2S1 579 aa14.42□□□□□ -0.1
PDLIM2-217ENST00000491330 ZNF442Q9H7R0 627 aa14.42□□□□□ -0.1
PDLIM2-217ENST00000491330 DYNLRB1Q9NP97 96 aa14.42□□□□□ -0.1
PDLIM2-217ENST00000491330 SEC14L4Q9UDX3 406 aa14.42□□□□□ -0.1
PDLIM2-217ENST00000491330 MAP1AP78559 2803 aaPredicted RBP14.42□□□□□ -0.1
PDLIM2-217ENST00000491330 RAI1Q7Z5J4 1906 aaPredicted RBP14.42□□□□□ -0.1
PDLIM2-217ENST00000491330 USF3Q68DE3 2245 aa14.42□□□□□ -0.1
PDLIM2-217ENST00000491330 AKAP9Q99996 3911 aa14.42□□□□□ -0.1
PDLIM2-217ENST00000491330 A8MV72 311 aaPredicted RBP14.41□□□□□ -0.1
PDLIM2-217ENST00000491330 MGRN1O60291 552 aa14.41□□□□□ -0.1
PDLIM2-217ENST00000491330 PTHP01270 115 aa14.41□□□□□ -0.1
PDLIM2-217ENST00000491330 IGF2P01344 180 aa14.41□□□□□ -0.1
PDLIM2-217ENST00000491330 IGLV1-44P01699 117 aa14.41□□□□□ -0.1
PDLIM2-217ENST00000491330 THRBP10828 461 aa14.41□□□□□ -0.1
PDLIM2-217ENST00000491330 COX4I1P13073 169 aa14.41□□□□□ -0.1
PDLIM2-217ENST00000491330 RBM34P42696 430 aaKnown RBP14.41□□□□□ -0.1
PDLIM2-217ENST00000491330 BIDP55957 195 aa14.41□□□□□ -0.1
PDLIM2-217ENST00000491330 SELENOVP59797 346 aa14.41□□□□□ -0.1
PDLIM2-217ENST00000491330 TUBA1BP68363 451 aa14.41□□□□□ -0.1
PDLIM2-217ENST00000491330 TUBA4AP68366 448 aa14.41□□□□□ -0.1
PDLIM2-217ENST00000491330 LOXL1Q08397 574 aaPredicted RBP14.41□□□□□ -0.1
PDLIM2-217ENST00000491330 CAMK2DQ13557 499 aa14.41□□□□□ -0.1
PDLIM2-217ENST00000491330 DAG1Q14118 895 aa14.41□□□□□ -0.1
PDLIM2-217ENST00000491330 EFNB3Q15768 340 aa14.41□□□□□ -0.1
PDLIM2-217ENST00000491330 RABL3Q5HYI8 236 aa14.41□□□□□ -0.1
PDLIM2-217ENST00000491330 TUBA1AQ71U36 451 aa14.41□□□□□ -0.1
PDLIM2-217ENST00000491330 SLC35D2Q76EJ3 337 aa14.41□□□□□ -0.1
PDLIM2-217ENST00000491330 MAPK1IP1LQ8NDC0 245 aa14.41□□□□□ -0.1
PDLIM2-217ENST00000491330 OR10H5Q8NGA6 315 aa14.41□□□□□ -0.1
PDLIM2-217ENST00000491330 OR6X1Q8NH79 312 aa14.41□□□□□ -0.1
PDLIM2-217ENST00000491330 ZNF583Q96ND8 569 aa14.41□□□□□ -0.1
PDLIM2-217ENST00000491330 MOGAT1Q96PD6 335 aa14.41□□□□□ -0.1
PDLIM2-217ENST00000491330 TNFRSF13CQ96RJ3 184 aa14.41□□□□□ -0.1
PDLIM2-217ENST00000491330 FOXB1Q99853 325 aa14.41□□□□□ -0.1
PDLIM2-217ENST00000491330 LRMDAQ9H2I8 198 aa14.41□□□□□ -0.1
PDLIM2-217ENST00000491330 MED29Q9NX70 200 aa14.41□□□□□ -0.1
PDLIM2-217ENST00000491330 GPR160Q9UJ42 338 aa14.41□□□□□ -0.1
PDLIM2-217ENST00000491330 CMAHPQ9Y471 501 aa14.41□□□□□ -0.1
PDLIM2-217ENST00000491330 HIVEP2P31629 2446 aa14.41□□□□□ -0.1
PDLIM2-217ENST00000491330 LOC390937A0A1W2PQ73 354 aa14.4□□□□□ -0.1
PDLIM2-217ENST00000491330 ELOVL7A1L3X0 281 aa14.4□□□□□ -0.1
PDLIM2-217ENST00000491330 BLOC1S5-TXNDC5H3BN57 136 aa14.4□□□□□ -0.1
PDLIM2-217ENST00000491330 KPNA4O00629 521 aaPredicted RBP14.4□□□□□ -0.1
PDLIM2-217ENST00000491330 CRLF1O75462 422 aa14.4□□□□□ -0.1
PDLIM2-217ENST00000491330 IFNGR1P15260 489 aa14.4□□□□□ -0.1
PDLIM2-217ENST00000491330 USF1P22415 310 aaPredicted RBP14.4□□□□□ -0.1
PDLIM2-217ENST00000491330 GUCA1AP43080 201 aaPredicted RBP14.4□□□□□ -0.1
PDLIM2-217ENST00000491330 ZNF84P51523 738 aa14.4□□□□□ -0.1
PDLIM2-217ENST00000491330 CLRN1P58418 232 aa14.4□□□□□ -0.1
PDLIM2-217ENST00000491330 ZP4Q12836 540 aa14.4□□□□□ -0.1
PDLIM2-217ENST00000491330 ZNF74Q16587 644 aa14.4□□□□□ -0.1
PDLIM2-217ENST00000491330 SWI5Q1ZZU3 235 aa14.4□□□□□ -0.1
PDLIM2-217ENST00000491330 CYB5R2Q6BCY4 276 aa14.4□□□□□ -0.1
PDLIM2-217ENST00000491330 LINC00114Q6XXX2 140 aa14.4□□□□□ -0.1
PDLIM2-217ENST00000491330 DEF8Q6ZN54 512 aa14.4□□□□□ -0.1
PDLIM2-217ENST00000491330 DNM1P46Q6ZS02 220 aa14.4□□□□□ -0.1
PDLIM2-217ENST00000491330 LINGO2Q7L985 606 aa14.4□□□□□ -0.1
PDLIM2-217ENST00000491330 MDP1Q86V88 176 aa14.4□□□□□ -0.1
PDLIM2-217ENST00000491330 CARM1Q86X55 608 aa14.4□□□□□ -0.1
PDLIM2-217ENST00000491330 ZNF525Q8N782 197 aa14.4□□□□□ -0.1
PDLIM2-217ENST00000491330 NEU4Q8WWR8 484 aaPredicted RBP14.4□□□□□ -0.1
PDLIM2-217ENST00000491330 TAMM41Q96BW9 452 aa14.4□□□□□ -0.1
PDLIM2-217ENST00000491330 RCN3Q96D15 328 aa14.4□□□□□ -0.1
PDLIM2-217ENST00000491330 SLC25A44Q96H78 314 aaPredicted RBP14.4□□□□□ -0.1
PDLIM2-217ENST00000491330 ELAC2Q9BQ52 826 aaKnown RBP14.4□□□□□ -0.1
PDLIM2-217ENST00000491330 PLK3Q9H4B4 646 aa14.4□□□□□ -0.1
PDLIM2-217ENST00000491330 GLTPQ9NZD2 209 aa14.4□□□□□ -0.1
PDLIM2-217ENST00000491330 ARMCX1Q9P291 453 aa14.4□□□□□ -0.1
PDLIM2-217ENST00000491330 IGHV4-30-2A0A087WSY4 118 aa14.39□□□□□ -0.11
PDLIM2-217ENST00000491330 SLC22A23A1A5C7 686 aa14.39□□□□□ -0.11
PDLIM2-217ENST00000491330 GSTA4O15217 222 aa14.39□□□□□ -0.11
PDLIM2-217ENST00000491330 TPST2O60704 377 aa14.39□□□□□ -0.11
PDLIM2-217ENST00000491330 OR5F1O95221 314 aa14.39□□□□□ -0.11
PDLIM2-217ENST00000491330 IGHG1P01857 330 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms