RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 ZNF367Q7RTV3 350 aa12.48□□□□□ -0.41
SMPD4-219ENST00000491128 ANKRD13BQ86YJ7 626 aa12.48□□□□□ -0.41
SMPD4-219ENST00000491128 ARIH2OSQ8N7S6 290 aa12.48□□□□□ -0.41
SMPD4-219ENST00000491128 TMEM41AQ96HV5 264 aa12.48□□□□□ -0.41
SMPD4-219ENST00000491128 AGAP4Q96P64 663 aa12.48□□□□□ -0.41
SMPD4-219ENST00000491128 ALG12Q9BV10 488 aa12.48□□□□□ -0.41
SMPD4-219ENST00000491128 ALG8Q9BVK2 526 aa12.48□□□□□ -0.41
SMPD4-219ENST00000491128 ZNF552Q9H707 407 aaPredicted RBP12.48□□□□□ -0.41
SMPD4-219ENST00000491128 WDR76Q9H967 626 aa12.48□□□□□ -0.41
SMPD4-219ENST00000491128 MARCH7Q9H992 704 aa12.48□□□□□ -0.41
SMPD4-219ENST00000491128 CHST11Q9NPF2 352 aa12.48□□□□□ -0.41
SMPD4-219ENST00000491128 MRPL39Q9NYK5 338 aaKnown RBP12.48□□□□□ -0.41
SMPD4-219ENST00000491128 COPS3Q9UNS2 423 aa12.48□□□□□ -0.41
SMPD4-219ENST00000491128 GRIP1Q9Y3R0 1128 aa12.48□□□□□ -0.41
SMPD4-219ENST00000491128 NCKAP5O14513 1909 aa12.48□□□□□ -0.41
SMPD4-219ENST00000491128 IGKV1D-43A0A0B4J1Z2 117 aa12.48□□□□□ -0.41
SMPD4-219ENST00000491128 XKRYO14609 159 aa12.48□□□□□ -0.41
SMPD4-219ENST00000491128 KLK10O43240 276 aa12.48□□□□□ -0.41
SMPD4-219ENST00000491128 AIREO43918 545 aa12.48□□□□□ -0.41
SMPD4-219ENST00000491128 SLC16A7O60669 478 aa12.48□□□□□ -0.41
SMPD4-219ENST00000491128 MPZL1O95297 269 aa12.48□□□□□ -0.41
SMPD4-219ENST00000491128 PSKH1P11801 424 aa12.48□□□□□ -0.41
SMPD4-219ENST00000491128 CNR1P21554 472 aa12.48□□□□□ -0.41
SMPD4-219ENST00000491128 ENPP1P22413 925 aa12.48□□□□□ -0.41
SMPD4-219ENST00000491128 CASRP41180 1078 aa12.48□□□□□ -0.41
SMPD4-219ENST00000491128 MAGEA5P43359 124 aa12.48□□□□□ -0.41
SMPD4-219ENST00000491128 TMBIM6P55061 237 aa12.48□□□□□ -0.41
SMPD4-219ENST00000491128 WNT4P56705 351 aa12.48□□□□□ -0.41
SMPD4-219ENST00000491128 OR12D2P58182 307 aa12.48□□□□□ -0.41
SMPD4-219ENST00000491128 RPL27P61353 136 aaKnown RBP12.48□□□□□ -0.41
SMPD4-219ENST00000491128 NFATC3Q12968 1075 aa12.48□□□□□ -0.41
SMPD4-219ENST00000491128 SELENBP1Q13228 472 aa12.48□□□□□ -0.41
SMPD4-219ENST00000491128 LINC01590Q5TEZ4 76 aa12.48□□□□□ -0.41
SMPD4-219ENST00000491128 TMEM225Q6GV28 225 aa12.48□□□□□ -0.41
SMPD4-219ENST00000491128 JMJD6Q6NYC1 403 aaPredicted RBP12.48□□□□□ -0.41
SMPD4-219ENST00000491128 ERI1Q8IV48 349 aaKnown RBP12.48□□□□□ -0.41
SMPD4-219ENST00000491128 ACBD7Q8N6N7 88 aa12.48□□□□□ -0.41
SMPD4-219ENST00000491128 OR2M7Q8NG81 312 aa12.48□□□□□ -0.41
SMPD4-219ENST00000491128 FCGR1BQ92637 280 aa12.48□□□□□ -0.41
SMPD4-219ENST00000491128 ZBTB8AQ96BR9 441 aa12.48□□□□□ -0.41
SMPD4-219ENST00000491128 CRELD1Q96HD1 420 aa12.48□□□□□ -0.41
SMPD4-219ENST00000491128 SMAD5Q99717 465 aaKnown RBP12.48□□□□□ -0.41
SMPD4-219ENST00000491128 TM9SF2Q99805 663 aa12.48□□□□□ -0.41
SMPD4-219ENST00000491128 SCNM1Q9BWG6 230 aa12.48□□□□□ -0.41
SMPD4-219ENST00000491128 NMNAT2Q9BZQ4 307 aa12.48□□□□□ -0.41
SMPD4-219ENST00000491128 B3GNT4Q9C0J1 378 aa12.48□□□□□ -0.41
SMPD4-219ENST00000491128 EXOSC4Q9NPD3 245 aaKnown RBP12.48□□□□□ -0.41
SMPD4-219ENST00000491128 TIMMDC1Q9NPL8 285 aa12.48□□□□□ -0.41
SMPD4-219ENST00000491128 B3GAT1Q9P2W7 334 aa12.48□□□□□ -0.41
SMPD4-219ENST00000491128 ZMIZ1Q9ULJ6 1067 aa12.48□□□□□ -0.41
SMPD4-219ENST00000491128 A0A0J9YW62 118 aa12.47□□□□□ -0.41
SMPD4-219ENST00000491128 J3QLW9 94 aa12.47□□□□□ -0.41
SMPD4-219ENST00000491128 ITGB2P05107 769 aa12.47□□□□□ -0.41
SMPD4-219ENST00000491128 CTLA4P16410 223 aa12.47□□□□□ -0.41
SMPD4-219ENST00000491128 ZNF19P17023 458 aa12.47□□□□□ -0.41
SMPD4-219ENST00000491128 EIF1P41567 113 aaKnown RBP12.47□□□□□ -0.41
SMPD4-219ENST00000491128 RANBP1P43487 201 aa12.47□□□□□ -0.41
SMPD4-219ENST00000491128 CD97P48960 835 aa12.47□□□□□ -0.41
SMPD4-219ENST00000491128 ARG2P78540 354 aa12.47□□□□□ -0.41
SMPD4-219ENST00000491128 PMP22Q01453 160 aa12.47□□□□□ -0.41
SMPD4-219ENST00000491128 ZNF85Q03923 595 aa12.47□□□□□ -0.41
SMPD4-219ENST00000491128 SRYQ05066 204 aa12.47□□□□□ -0.41
SMPD4-219ENST00000491128 TP53I3Q53FA7 332 aa12.47□□□□□ -0.41
SMPD4-219ENST00000491128 TMEM81Q6P7N7 255 aa12.47□□□□□ -0.41
SMPD4-219ENST00000491128 C9orf43Q8TAL5 461 aaPredicted RBP12.47□□□□□ -0.41
SMPD4-219ENST00000491128 RAB2BQ8WUD1 216 aa12.47□□□□□ -0.41
SMPD4-219ENST00000491128 NTNG2Q96CW9 530 aa12.47□□□□□ -0.41
SMPD4-219ENST00000491128 DOK1Q99704 481 aa12.47□□□□□ -0.41
SMPD4-219ENST00000491128 TXNIPQ9H3M7 391 aa12.47□□□□□ -0.41
SMPD4-219ENST00000491128 ZFP64Q9NPA5 681 aa12.47□□□□□ -0.41
SMPD4-219ENST00000491128 SIRT4Q9Y6E7 314 aaPredicted RBP12.47□□□□□ -0.41
SMPD4-219ENST00000491128 IGF2RP11717 2491 aa12.47□□□□□ -0.41
SMPD4-219ENST00000491128 A0A1W2PRG6 482 aa12.47□□□□□ -0.41
SMPD4-219ENST00000491128 SMIM30A4D0T7 59 aa12.47□□□□□ -0.41
SMPD4-219ENST00000491128 PRR32B1ATL7 298 aa12.47□□□□□ -0.41
SMPD4-219ENST00000491128 EIF1AYO14602 144 aaKnown RBP12.47□□□□□ -0.41
SMPD4-219ENST00000491128 DVL2O14641 736 aa12.47□□□□□ -0.41
SMPD4-219ENST00000491128 IGHA1P01876 353 aa12.47□□□□□ -0.41
SMPD4-219ENST00000491128 HLA-DQA2P01906 255 aa12.47□□□□□ -0.41
SMPD4-219ENST00000491128 SUCLG1P53597 346 aaKnown RBP12.47□□□□□ -0.41
SMPD4-219ENST00000491128 BIDP55957 195 aa12.47□□□□□ -0.41
SMPD4-219ENST00000491128 B3GALT5-AS1P59052 145 aa12.47□□□□□ -0.41
SMPD4-219ENST00000491128 HSF1Q00613 529 aa12.47□□□□□ -0.41
SMPD4-219ENST00000491128 CAMK2DQ13557 499 aa12.47□□□□□ -0.41
SMPD4-219ENST00000491128 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.47□□□□□ -0.41
SMPD4-219ENST00000491128 SLC35D2Q76EJ3 337 aa12.47□□□□□ -0.41
SMPD4-219ENST00000491128 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.47□□□□□ -0.41
SMPD4-219ENST00000491128 ATCAYQ86WG3 371 aa12.47□□□□□ -0.41
SMPD4-219ENST00000491128 DND1Q8IYX4 353 aaKnown RBP12.47□□□□□ -0.41
SMPD4-219ENST00000491128 ZNF248Q8NDW4 579 aa12.47□□□□□ -0.41
SMPD4-219ENST00000491128 ZNF420Q8TAQ5 688 aaPredicted RBP12.47□□□□□ -0.41
SMPD4-219ENST00000491128 SFXN2Q96NB2 322 aa12.47□□□□□ -0.41
SMPD4-219ENST00000491128 IP6K3Q96PC2 410 aa12.47□□□□□ -0.41
SMPD4-219ENST00000491128 DCLRE1CQ96SD1 692 aaKnown RBP12.47□□□□□ -0.41
SMPD4-219ENST00000491128 ABI3Q9P2A4 366 aa12.47□□□□□ -0.41
SMPD4-219ENST00000491128 ZNF407Q9C0G0 2248 aa12.46□□□□□ -0.41
SMPD4-219ENST00000491128 SLC35F4A4IF30 521 aa12.46□□□□□ -0.41
SMPD4-219ENST00000491128 NPIPA5E9PKD4 350 aa12.46□□□□□ -0.41
SMPD4-219ENST00000491128 GPX5O75715 221 aa12.46□□□□□ -0.41
SMPD4-219ENST00000491128 WISP2O76076 250 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms