RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833	CDC20B	Q86Y33	519 aa		5.76	□□□□□ -1.49
FN1-223	ENST00000490833	ZNF679	Q8IYX0	411 aa		5.76	□□□□□ -1.49
FN1-223	ENST00000490833	ZNF676	Q8N7Q3	588 aa		5.76	□□□□□ -1.49
FN1-223	ENST00000490833	TMEM99	Q8N816	258 aa		5.76	□□□□□ -1.49
FN1-223	ENST00000490833	FRMD1	Q8N878	549 aa		5.76	□□□□□ -1.49
FN1-223	ENST00000490833	NKAIN3	Q8N8D7	197 aa		5.76	□□□□□ -1.49
FN1-223	ENST00000490833	SDR9C7	Q8NEX9	313 aa		5.76	□□□□□ -1.49
FN1-223	ENST00000490833	OR4D9	Q8NGE8	314 aa		5.76	□□□□□ -1.49
FN1-223	ENST00000490833	CEP76	Q8TAP6	659 aa		5.76	□□□□□ -1.49
FN1-223	ENST00000490833	SLC22A8	Q8TCC7	542 aa		5.76	□□□□□ -1.49
FN1-223	ENST00000490833	RHBDD1	Q8TEB9	315 aa		5.76	□□□□□ -1.49
FN1-223	ENST00000490833	UBASH3B	Q8TF42	649 aa		5.76	□□□□□ -1.49
FN1-223	ENST00000490833	SMIM4	Q8WVI0	70 aa		5.76	□□□□□ -1.49
FN1-223	ENST00000490833	MIB2	Q96AX9	1013 aa		5.76	□□□□□ -1.49
FN1-223	ENST00000490833	NXPE2	Q96DL1	559 aa		5.76	□□□□□ -1.49
FN1-223	ENST00000490833	ZMYND19	Q96E35	227 aa	Predicted RBP	5.76	□□□□□ -1.49
FN1-223	ENST00000490833	MRGPRX4	Q96LA9	322 aa		5.76	□□□□□ -1.49
FN1-223	ENST00000490833	RBP7	Q96R05	134 aa		5.76	□□□□□ -1.49
FN1-223	ENST00000490833	ADO	Q96SZ5	270 aa		5.76	□□□□□ -1.49
FN1-223	ENST00000490833	NMNAT3	Q96T66	252 aa		5.76	□□□□□ -1.49
FN1-223	ENST00000490833	ELF4	Q99607	663 aa	Predicted RBP	5.76	□□□□□ -1.49
FN1-223	ENST00000490833	LPAR4	Q99677	370 aa		5.76	□□□□□ -1.49
FN1-223	ENST00000490833	CACNG6	Q9BXT2	260 aa		5.76	□□□□□ -1.49
FN1-223	ENST00000490833	WWTR1	Q9GZV5	400 aa		5.76	□□□□□ -1.49
FN1-223	ENST00000490833	MIR1-1HG	Q9H1L0	117 aa		5.76	□□□□□ -1.49
FN1-223	ENST00000490833	SLC26A1	Q9H2B4	701 aa		5.76	□□□□□ -1.49
FN1-223	ENST00000490833	TCEAL2	Q9H3H9	227 aa	Predicted RBP	5.76	□□□□□ -1.49
FN1-223	ENST00000490833	PTGES2	Q9H7Z7	377 aa		5.76	□□□□□ -1.49
FN1-223	ENST00000490833	WDR54	Q9H977	334 aa		5.76	□□□□□ -1.49
FN1-223	ENST00000490833	SYNPO2L	Q9H987	977 aa		5.76	□□□□□ -1.49
FN1-223	ENST00000490833	SCPEP1	Q9HB40	452 aa		5.76	□□□□□ -1.49
FN1-223	ENST00000490833	FGF21	Q9NSA1	209 aa		5.76	□□□□□ -1.49
FN1-223	ENST00000490833	STARD5	Q9NSY2	213 aa		5.76	□□□□□ -1.49
FN1-223	ENST00000490833	TAS2R10	Q9NYW0	307 aa		5.76	□□□□□ -1.49
FN1-223	ENST00000490833	VSX1	Q9NZR4	365 aa	Predicted RBP	5.76	□□□□□ -1.49
FN1-223	ENST00000490833	RARRES3	Q9UL19	164 aa		5.76	□□□□□ -1.49
FN1-223	ENST00000490833	NTNG1	Q9Y2I2	539 aa		5.76	□□□□□ -1.49
FN1-223	ENST00000490833	N6AMT1	Q9Y5N5	214 aa		5.76	□□□□□ -1.49
FN1-223	ENST00000490833	PLXND1	Q9Y4D7	1925 aa		5.76	□□□□□ -1.49
FN1-223	ENST00000490833	GOLGA4	Q13439	2230 aa	Known RBP	5.75	□□□□□ -1.49
FN1-223	ENST00000490833	IGLV3-32	A0A0A0MS00	114 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	TRBV5-5	A0A0J9YX44	114 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	LOC102725191	A0A1B0GVB3	256 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833		A0A1B0GW55	424 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	C7orf66	A4D0T2	115 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	PRSS37	A4D1T9	235 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	METTL21EP	A6NDL7	271 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	OR6C68	A6NDL8	312 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	SNRPGP15	A8MWD9	76 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833		H3BMH7	237 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	ETV2	O00321	342 aa	Predicted RBP	5.75	□□□□□ -1.49
FN1-223	ENST00000490833	TFEC	O14948	347 aa	Predicted RBP	5.75	□□□□□ -1.49
FN1-223	ENST00000490833	XRCC3	O43542	346 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	RBBP9	O75884	186 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	KRT33A	O76009	404 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	VAMP5	O95183	116 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	APOL3	O95236	402 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	TGM6	O95932	706 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	LALBA	P00709	142 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	TCRB	P04435	133 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	ISG15	P05161	165 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	CLEC2L	P0C7M8	214 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	GSTT2	P0CG29	244 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	DUX4L2	P0CJ85	424 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	DUX4L3	P0CJ86	424 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	DUX4L4	P0CJ87	422 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	DUX4L5	P0CJ88	424 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	DUX4L6	P0CJ89	424 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	DUX4L7	P0CJ90	424 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	ANXA3	P12429	323 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	ICAM2	P13598	275 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	CPN1	P15169	458 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	ARSB	P15848	533 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	ALOX5AP	P20292	161 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	PSMB1	P20618	241 aa	Known RBP	5.75	□□□□□ -1.49
FN1-223	ENST00000490833	AZGP1	P25311	298 aa	Known RBP	5.75	□□□□□ -1.49
FN1-223	ENST00000490833	ABCD3	P28288	659 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	EVI2B	P34910	448 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	PTGER1	P34995	402 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	ACVR1B	P36896	505 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	GZMK	P49863	264 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	ZNF41	P51814	821 aa	Predicted RBP	5.75	□□□□□ -1.49
FN1-223	ENST00000490833	RIDA	P52758	137 aa	Known RBP	5.75	□□□□□ -1.49
FN1-223	ENST00000490833	ACTB	P60709	375 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	ERVK-25	P63136	954 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	ACTG1	P63261	375 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	E2F1	Q01094	437 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	FAP	Q12884	760 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	FZD5	Q13467	585 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	ARL6IP1	Q15041	203 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	CCDC85B	Q15834	202 aa	Predicted RBP	5.75	□□□□□ -1.49
FN1-223	ENST00000490833	THEM4	Q5T1C6	240 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	ZNF684	Q5T5D7	378 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	C1orf140	Q5VVS0	124 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	VASN	Q6EMK4	673 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	TMEM81	Q6P7N7	255 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	H1FNT	Q75WM6	255 aa	Predicted RBP	5.75	□□□□□ -1.49
FN1-223	ENST00000490833	KRT74	Q7RTS7	529 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	HMGN2P46	Q86SG4	172 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	5.75	□□□□□ -1.49

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