RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 ABCD2Q9UBJ2 740 aa9.07□□□□□ -0.96
TTC28-207ENST00000490475 TESQ9UGI8 421 aaKnown RBP9.07□□□□□ -0.96
TTC28-207ENST00000490475 EGFL7Q9UHF1 273 aa9.07□□□□□ -0.96
TTC28-207ENST00000490475 GDF2Q9UK05 429 aaPredicted RBP9.07□□□□□ -0.96
TTC28-207ENST00000490475 RASD1Q9Y272 281 aa9.07□□□□□ -0.96
TTC28-207ENST00000490475 ATP23Q9Y6H3 246 aa9.07□□□□□ -0.96
TTC28-207ENST00000490475 MXRA5Q9NR99 2828 aa9.06□□□□□ -0.96
TTC28-207ENST00000490475 IGKV1D-42A0A075B6H8 117 aa9.06□□□□□ -0.96
TTC28-207ENST00000490475 A0A087WUJ7 227 aa9.06□□□□□ -0.96
TTC28-207ENST00000490475 B2RBV5 119 aa9.06□□□□□ -0.96
TTC28-207ENST00000490475 AKAP8O43823 692 aaKnown RBP9.06□□□□□ -0.96
TTC28-207ENST00000490475 OR2T1O43869 369 aa9.06□□□□□ -0.96
TTC28-207ENST00000490475 FMO6PO60774 539 aa9.06□□□□□ -0.96
TTC28-207ENST00000490475 FKBP6O75344 327 aa9.06□□□□□ -0.96
TTC28-207ENST00000490475 PDE5AO76074 875 aa9.06□□□□□ -0.96
TTC28-207ENST00000490475 LYPD3O95274 346 aa9.06□□□□□ -0.96
TTC28-207ENST00000490475 CRYAAP02489 173 aa9.06□□□□□ -0.96
TTC28-207ENST00000490475 ERCC1P07992 297 aaPredicted RBP9.06□□□□□ -0.96
TTC28-207ENST00000490475 PNMTP11086 282 aa9.06□□□□□ -0.96
TTC28-207ENST00000490475 CBLP22681 906 aa9.06□□□□□ -0.96
TTC28-207ENST00000490475 UBE2NP61088 152 aaKnown RBP9.06□□□□□ -0.96
TTC28-207ENST00000490475 SNRPD2P62316 118 aaKnown RBP9.06□□□□□ -0.96
TTC28-207ENST00000490475 SELENOWP63302 87 aa9.06□□□□□ -0.96
TTC28-207ENST00000490475 SLC34A1Q06495 639 aa9.06□□□□□ -0.96
TTC28-207ENST00000490475 KPNB1Q14974 876 aaKnown RBP9.06□□□□□ -0.96
TTC28-207ENST00000490475 TSPO2Q5TGU0 170 aa9.06□□□□□ -0.96
TTC28-207ENST00000490475 HMBOX1Q6NT76 420 aa9.06□□□□□ -0.96
TTC28-207ENST00000490475 LINC00114Q6XXX2 140 aa9.06□□□□□ -0.96
TTC28-207ENST00000490475 VTCN1Q7Z7D3 282 aa9.06□□□□□ -0.96
TTC28-207ENST00000490475 GPAT4Q86UL3 456 aa9.06□□□□□ -0.96
TTC28-207ENST00000490475 CCDC36Q8IYA8 594 aa9.06□□□□□ -0.96
TTC28-207ENST00000490475 FAM169BQ8N8A8 192 aa9.06□□□□□ -0.96
TTC28-207ENST00000490475 WDR31Q8NA23 367 aa9.06□□□□□ -0.96
TTC28-207ENST00000490475 FAM156AQ8NDB6 213 aa9.06□□□□□ -0.96
TTC28-207ENST00000490475 ZNF540Q8NDQ6 660 aa9.06□□□□□ -0.96
TTC28-207ENST00000490475 MAGEE2Q8TD90 523 aaPredicted RBP9.06□□□□□ -0.96
TTC28-207ENST00000490475 TMEM158Q8WZ71 300 aa9.06□□□□□ -0.96
TTC28-207ENST00000490475 STMN2Q93045 179 aa9.06□□□□□ -0.96
TTC28-207ENST00000490475 MCUR1Q96AQ8 359 aa9.06□□□□□ -0.96
TTC28-207ENST00000490475 NR1H4Q96RI1 486 aaPredicted RBP9.06□□□□□ -0.96
TTC28-207ENST00000490475 KATNB1Q9BVA0 655 aa9.06□□□□□ -0.96
TTC28-207ENST00000490475 PTDSS2Q9BVG9 487 aa9.06□□□□□ -0.96
TTC28-207ENST00000490475 DENND2DQ9H6A0 471 aaPredicted RBP9.06□□□□□ -0.96
TTC28-207ENST00000490475 C12orf10Q9HB07 376 aa9.06□□□□□ -0.96
TTC28-207ENST00000490475 SPAG4Q9NPE6 437 aa9.06□□□□□ -0.96
TTC28-207ENST00000490475 SELENONQ9NZV5 590 aa9.06□□□□□ -0.96
TTC28-207ENST00000490475 BAG5Q9UL15 447 aa9.06□□□□□ -0.96
TTC28-207ENST00000490475 STAB1Q9NY15 2570 aa9.06□□□□□ -0.96
TTC28-207ENST00000490475 ARFGEF3Q5TH69 2177 aa9.05□□□□□ -0.96
TTC28-207ENST00000490475 ARPC4-TTLL3A0A0A6YYG9 625 aa9.05□□□□□ -0.96
TTC28-207ENST00000490475 FTCDNL1E5RQL4 147 aa9.05□□□□□ -0.96
TTC28-207ENST00000490475 NDUFS7O75251 213 aa9.05□□□□□ -0.96
TTC28-207ENST00000490475 AHSA1O95433 338 aa9.05□□□□□ -0.96
TTC28-207ENST00000490475 ZNF682O95780 498 aa9.05□□□□□ -0.96
TTC28-207ENST00000490475 F12P00748 615 aaPredicted RBP9.05□□□□□ -0.96
TTC28-207ENST00000490475 SERPINA1P01009 418 aa9.05□□□□□ -0.96
TTC28-207ENST00000490475 FAM157CP0CG43 387 aa9.05□□□□□ -0.96
TTC28-207ENST00000490475 TCN1P20061 433 aaPredicted RBP9.05□□□□□ -0.96
TTC28-207ENST00000490475 THBS2P35442 1172 aa9.05□□□□□ -0.96
TTC28-207ENST00000490475 YAP1P46937 504 aaKnown RBP9.05□□□□□ -0.96
TTC28-207ENST00000490475 PTDSS1P48651 473 aaKnown RBP9.05□□□□□ -0.96
TTC28-207ENST00000490475 P2RY4P51582 365 aa9.05□□□□□ -0.96
TTC28-207ENST00000490475 MXRA7P84157 204 aa9.05□□□□□ -0.96
TTC28-207ENST00000490475 PIN1Q13526 163 aaPredicted RBP9.05□□□□□ -0.96
TTC28-207ENST00000490475 MFSD13AQ14CX5 517 aa9.05□□□□□ -0.96
TTC28-207ENST00000490475 TMEM249Q2WGJ8 235 aa9.05□□□□□ -0.96
TTC28-207ENST00000490475 C6orf52Q5T4I8 152 aa9.05□□□□□ -0.96
TTC28-207ENST00000490475 CYB5R2Q6BCY4 276 aa9.05□□□□□ -0.96
TTC28-207ENST00000490475 GLYATQ6IB77 296 aa9.05□□□□□ -0.96
TTC28-207ENST00000490475 ZNF613Q6PF04 617 aa9.05□□□□□ -0.96
TTC28-207ENST00000490475 WDR88Q6ZMY6 472 aa9.05□□□□□ -0.96
TTC28-207ENST00000490475 DEF8Q6ZN54 512 aa9.05□□□□□ -0.96
TTC28-207ENST00000490475 DEFB107AQ8IZN7 70 aa9.05□□□□□ -0.96
TTC28-207ENST00000490475 KDM8Q8N371 416 aa9.05□□□□□ -0.96
TTC28-207ENST00000490475 ZIC4Q8N9L1 334 aa9.05□□□□□ -0.96
TTC28-207ENST00000490475 MAPK1IP1LQ8NDC0 245 aa9.05□□□□□ -0.96
TTC28-207ENST00000490475 IL17RDQ8NFM7 739 aa9.05□□□□□ -0.96
TTC28-207ENST00000490475 OR4F15Q8NGB8 312 aa9.05□□□□□ -0.96
TTC28-207ENST00000490475 MFSD8Q8NHS3 518 aa9.05□□□□□ -0.96
TTC28-207ENST00000490475 ADAMTS16Q8TE57 1224 aa9.05□□□□□ -0.96
TTC28-207ENST00000490475 MDFIQ99750 246 aa9.05□□□□□ -0.96
TTC28-207ENST00000490475 CADM1Q9BY67 442 aaKnown RBP9.05□□□□□ -0.96
TTC28-207ENST00000490475 LINC00470Q9BZP3 86 aa9.05□□□□□ -0.96
TTC28-207ENST00000490475 FAM192AQ9GZU8 254 aa9.05□□□□□ -0.96
TTC28-207ENST00000490475 VCX3BQ9H321 246 aa9.05□□□□□ -0.96
TTC28-207ENST00000490475 SEC14L4Q9UDX3 406 aa9.05□□□□□ -0.96
TTC28-207ENST00000490475 CD300AQ9UGN4 299 aa9.05□□□□□ -0.96
TTC28-207ENST00000490475 SLC7A7Q9UM01 511 aa9.05□□□□□ -0.96
TTC28-207ENST00000490475 RCE1Q9Y256 329 aa9.05□□□□□ -0.96
TTC28-207ENST00000490475 SNX13Q9Y5W8 968 aa9.05□□□□□ -0.96
TTC28-207ENST00000490475 YLPM1P49750 1951 aaKnown RBP9.04□□□□□ -0.96
TTC28-207ENST00000490475 TRAV36DV7A0A075B6V5 113 aa9.04□□□□□ -0.96
TTC28-207ENST00000490475 IGHV4-30-2A0A087WSY4 118 aa9.04□□□□□ -0.96
TTC28-207ENST00000490475 A0A1W2PR80 420 aa9.04□□□□□ -0.96
TTC28-207ENST00000490475 TRAPPC13A5PLN9 417 aa9.04□□□□□ -0.96
TTC28-207ENST00000490475 B9A039 149 aa9.04□□□□□ -0.96
TTC28-207ENST00000490475 LRRN3E7EW58 273 aa9.04□□□□□ -0.96
TTC28-207ENST00000490475 AHCYL1O43865 530 aa9.04□□□□□ -0.96
TTC28-207ENST00000490475 CIB2O75838 187 aa9.04□□□□□ -0.96
TTC28-207ENST00000490475 ZNF43P17038 809 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms