RNA–Protein interactions for RNA: ENST00000490398.5

COL9A3-214, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-214ENST00000490398 FAM162AQ96A26 154 aa15.8■□□□□ 0.12
COL9A3-214ENST00000490398 SGTBQ96EQ0 304 aa15.8■□□□□ 0.12
COL9A3-214ENST00000490398 TRAF4Q9BUZ4 470 aaPredicted RBP15.8■□□□□ 0.12
COL9A3-214ENST00000490398 NOX3Q9HBY0 568 aa15.8■□□□□ 0.12
COL9A3-214ENST00000490398 ADA2Q9NZK5 511 aa15.8■□□□□ 0.12
COL9A3-214ENST00000490398 MOKQ9UQ07 419 aa15.8■□□□□ 0.12
COL9A3-214ENST00000490398 ARID1AO14497 2285 aa15.79■□□□□ 0.12
COL9A3-214ENST00000490398 ARPC4-TTLL3A0A0A6YYG9 625 aa15.79■□□□□ 0.12
COL9A3-214ENST00000490398 TRIM64A6NGJ6 449 aa15.79■□□□□ 0.12
COL9A3-214ENST00000490398 TRIM64BA6NI03 449 aa15.79■□□□□ 0.12
COL9A3-214ENST00000490398 ZNF726A6NNF4 738 aa15.79■□□□□ 0.12
COL9A3-214ENST00000490398 RNF13O43567 381 aa15.79■□□□□ 0.12
COL9A3-214ENST00000490398 AKAP8O43823 692 aaKnown RBP15.79■□□□□ 0.12
COL9A3-214ENST00000490398 WNT11O96014 354 aa15.79■□□□□ 0.12
COL9A3-214ENST00000490398 F13BP05160 661 aa15.79■□□□□ 0.12
COL9A3-214ENST00000490398 THRBP10828 461 aa15.79■□□□□ 0.12
COL9A3-214ENST00000490398 LAPTM4AQ15012 233 aa15.79■□□□□ 0.12
COL9A3-214ENST00000490398 IFI44LQ53G44 452 aa15.79■□□□□ 0.12
COL9A3-214ENST00000490398 KLHL24Q6TFL4 600 aa15.79■□□□□ 0.12
COL9A3-214ENST00000490398 NANOGNBQ7Z5D8 188 aa15.79■□□□□ 0.12
COL9A3-214ENST00000490398 ANKK1Q8NFD2 765 aa15.79■□□□□ 0.12
COL9A3-214ENST00000490398 OR6N1Q8NGY5 312 aa15.79■□□□□ 0.12
COL9A3-214ENST00000490398 LZICQ8WZA0 190 aa15.79■□□□□ 0.12
COL9A3-214ENST00000490398 HTRA1Q92743 480 aa15.79■□□□□ 0.12
COL9A3-214ENST00000490398 TMEM54Q969K7 222 aa15.79■□□□□ 0.12
COL9A3-214ENST00000490398 GTPBP3Q969Y2 492 aaKnown RBP15.79■□□□□ 0.12
COL9A3-214ENST00000490398 LRR1Q96L50 414 aa15.79■□□□□ 0.12
COL9A3-214ENST00000490398 Q96MF0 132 aa15.79■□□□□ 0.12
COL9A3-214ENST00000490398 CCT8L2Q96SF2 557 aa15.79■□□□□ 0.12
COL9A3-214ENST00000490398 SPAG4Q9NPE6 437 aa15.79■□□□□ 0.12
COL9A3-214ENST00000490398 ATP23Q9Y6H3 246 aa15.79■□□□□ 0.12
COL9A3-214ENST00000490398 ZANQ9Y493 2812 aa15.78■□□□□ 0.12
COL9A3-214ENST00000490398 IFNW1P05000 195 aa15.78■□□□□ 0.12
COL9A3-214ENST00000490398 TCN1P20061 433 aaPredicted RBP15.78■□□□□ 0.12
COL9A3-214ENST00000490398 MAKP20794 623 aa15.78■□□□□ 0.12
COL9A3-214ENST00000490398 CSNK1A1P48729 337 aa15.78■□□□□ 0.12
COL9A3-214ENST00000490398 SH3BGRP55822 239 aaPredicted RBP15.78■□□□□ 0.12
COL9A3-214ENST00000490398 UBE2NP61088 152 aaKnown RBP15.78■□□□□ 0.12
COL9A3-214ENST00000490398 ST3GAL3Q11203 375 aa15.78■□□□□ 0.12
COL9A3-214ENST00000490398 GLYATQ6IB77 296 aa15.78■□□□□ 0.12
COL9A3-214ENST00000490398 C11orf71Q6IPW1 123 aa15.78■□□□□ 0.12
COL9A3-214ENST00000490398 TBPL2Q6SJ96 375 aa15.78■□□□□ 0.12
COL9A3-214ENST00000490398 DTX2Q86UW9 622 aa15.78■□□□□ 0.12
COL9A3-214ENST00000490398 OFCC1Q8IZS5 231 aa15.78■□□□□ 0.12
COL9A3-214ENST00000490398 FITM2Q8N6M3 262 aa15.78■□□□□ 0.12
COL9A3-214ENST00000490398 OR6X1Q8NH79 312 aa15.78■□□□□ 0.12
COL9A3-214ENST00000490398 GEMIN6Q8WXD5 167 aaKnown RBP15.78■□□□□ 0.12
COL9A3-214ENST00000490398 RADILQ96JH8 1075 aa15.78■□□□□ 0.12
COL9A3-214ENST00000490398 SLC38A2Q96QD8 506 aa15.78■□□□□ 0.12
COL9A3-214ENST00000490398 LRRC37BQ96QE4 947 aa15.78■□□□□ 0.12
COL9A3-214ENST00000490398 ULBP2Q9BZM5 246 aa15.78■□□□□ 0.12
COL9A3-214ENST00000490398 CXorf56Q9H5V9 222 aa15.78■□□□□ 0.12
COL9A3-214ENST00000490398 CRNNQ9UBG3 495 aaPredicted RBP15.78■□□□□ 0.12
COL9A3-214ENST00000490398 TAGLN3Q9UI15 199 aa15.78■□□□□ 0.12
COL9A3-214ENST00000490398 GDF2Q9UK05 429 aaPredicted RBP15.78■□□□□ 0.12
COL9A3-214ENST00000490398 POU2F3Q9UKI9 436 aa15.78■□□□□ 0.12
COL9A3-214ENST00000490398 MGAT4BQ9UQ53 548 aa15.78■□□□□ 0.12
COL9A3-214ENST00000490398 MED31Q9Y3C7 131 aa15.78■□□□□ 0.12
COL9A3-214ENST00000490398 ZNF99A8MXY4 864 aaPredicted RBP15.77■□□□□ 0.12
COL9A3-214ENST00000490398 ARHGEF9O43307 516 aa15.77■□□□□ 0.12
COL9A3-214ENST00000490398 IGLV1-44P01699 117 aa15.77■□□□□ 0.12
COL9A3-214ENST00000490398 HLA-HP01893 362 aa15.77■□□□□ 0.12
COL9A3-214ENST00000490398 HIST1H2ABP04908 130 aa15.77■□□□□ 0.12
COL9A3-214ENST00000490398 TSPAN19P0C672 248 aa15.77■□□□□ 0.12
COL9A3-214ENST00000490398 CECR9P0C854 216 aa15.77■□□□□ 0.12
COL9A3-214ENST00000490398 IFI30P13284 250 aa15.77■□□□□ 0.12
COL9A3-214ENST00000490398 B4GALT1P15291 398 aa15.77■□□□□ 0.12
COL9A3-214ENST00000490398 CALCRP30988 508 aa15.77■□□□□ 0.12
COL9A3-214ENST00000490398 ATP5J2P56134 94 aa15.77■□□□□ 0.12
COL9A3-214ENST00000490398 LRFN4Q6PJG9 635 aa15.77■□□□□ 0.12
COL9A3-214ENST00000490398 FKBP9P1Q75LS8 142 aa15.77■□□□□ 0.12
COL9A3-214ENST00000490398 HIST3H2AQ7L7L0 130 aa15.77■□□□□ 0.12
COL9A3-214ENST00000490398 MDP1Q86V88 176 aa15.77■□□□□ 0.12
COL9A3-214ENST00000490398 NRMQ8IXM6 262 aa15.77■□□□□ 0.12
COL9A3-214ENST00000490398 FGFBP3Q8TAT2 258 aa15.77■□□□□ 0.12
COL9A3-214ENST00000490398 LIPHQ8WWY8 451 aa15.77■□□□□ 0.12
COL9A3-214ENST00000490398 HIST1H2ACQ93077 130 aa15.77■□□□□ 0.12
COL9A3-214ENST00000490398 HS6ST2Q96MM7 605 aa15.77■□□□□ 0.12
COL9A3-214ENST00000490398 DHRS9Q9BPW9 319 aa15.77■□□□□ 0.12
COL9A3-214ENST00000490398 OBP2BQ9NPH6 170 aa15.77■□□□□ 0.12
COL9A3-214ENST00000490398 B3GNT2Q9NY97 397 aa15.77■□□□□ 0.12
COL9A3-214ENST00000490398 FAM53CQ9NYF3 392 aa15.77■□□□□ 0.12
COL9A3-214ENST00000490398 ZNF224Q9NZL3 707 aa15.77■□□□□ 0.12
COL9A3-214ENST00000490398 CD300AQ9UGN4 299 aa15.77■□□□□ 0.12
COL9A3-214ENST00000490398 PLCE1Q9P212 2302 aa15.77■□□□□ 0.11
COL9A3-214ENST00000490398 A0A087WUU8 490 aa15.76■□□□□ 0.11
COL9A3-214ENST00000490398 NDUFAB1O14561 156 aa15.76■□□□□ 0.11
COL9A3-214ENST00000490398 DIRAS1O95057 198 aa15.76■□□□□ 0.11
COL9A3-214ENST00000490398 IGF2P01344 180 aa15.76■□□□□ 0.11
COL9A3-214ENST00000490398 PATE4P0C8F1 98 aa15.76■□□□□ 0.11
COL9A3-214ENST00000490398 PGA4P0DJD7 388 aa15.76■□□□□ 0.11
COL9A3-214ENST00000490398 PGA3P0DJD8 388 aa15.76■□□□□ 0.11
COL9A3-214ENST00000490398 TTKP33981 857 aa15.76■□□□□ 0.11
COL9A3-214ENST00000490398 FABP6P51161 128 aa15.76■□□□□ 0.11
COL9A3-214ENST00000490398 FHL1Q13642 323 aa15.76■□□□□ 0.11
COL9A3-214ENST00000490398 TRAM2Q15035 370 aa15.76■□□□□ 0.11
COL9A3-214ENST00000490398 PRSS57Q6UWY2 283 aa15.76■□□□□ 0.11
COL9A3-214ENST00000490398 ZNF813Q6ZN06 617 aa15.76■□□□□ 0.11
COL9A3-214ENST00000490398 ASB10Q8WXI3 467 aa15.76■□□□□ 0.11
COL9A3-214ENST00000490398 BPIFA2Q96DR5 249 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms