RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 TMEM120AQ9BXJ8 343 aa8.44□□□□□ -1.06
TMEM39A-210ENST00000490099 SLC19A3Q9BZV2 496 aa8.44□□□□□ -1.06
TMEM39A-210ENST00000490099 PLK3Q9H4B4 646 aa8.44□□□□□ -1.06
TMEM39A-210ENST00000490099 ZNF442Q9H7R0 627 aa8.44□□□□□ -1.06
TMEM39A-210ENST00000490099 NANOGQ9H9S0 305 aa8.44□□□□□ -1.06
TMEM39A-210ENST00000490099 CRLF2Q9HC73 371 aa8.44□□□□□ -1.06
TMEM39A-210ENST00000490099 CA10Q9NS85 328 aa8.44□□□□□ -1.06
TMEM39A-210ENST00000490099 TAS2R5Q9NYW4 299 aa8.44□□□□□ -1.06
TMEM39A-210ENST00000490099 ARL2BPQ9Y2Y0 163 aa8.44□□□□□ -1.06
TMEM39A-210ENST00000490099 ANK3Q12955 4377 aaKnown RBP8.44□□□□□ -1.06
TMEM39A-210ENST00000490099 CHD3Q12873 2000 aaKnown RBP8.43□□□□□ -1.06
TMEM39A-210ENST00000490099 A0A096LPE4 126 aa8.43□□□□□ -1.06
TMEM39A-210ENST00000490099 A0A1W2PPZ6 126 aa8.43□□□□□ -1.06
TMEM39A-210ENST00000490099 TMEM129A0AVI4 362 aa8.43□□□□□ -1.06
TMEM39A-210ENST00000490099 SLC35F4A4IF30 521 aa8.43□□□□□ -1.06
TMEM39A-210ENST00000490099 TRAPPC13A5PLN9 417 aa8.43□□□□□ -1.06
TMEM39A-210ENST00000490099 B9A039 149 aa8.43□□□□□ -1.06
TMEM39A-210ENST00000490099 LRRN3E7EW58 273 aa8.43□□□□□ -1.06
TMEM39A-210ENST00000490099 M0R3H8 397 aa8.43□□□□□ -1.06
TMEM39A-210ENST00000490099 AKAP8O43823 692 aaKnown RBP8.43□□□□□ -1.06
TMEM39A-210ENST00000490099 GPRIN2O60269 458 aa8.43□□□□□ -1.06
TMEM39A-210ENST00000490099 DCTN3O75935 186 aa8.43□□□□□ -1.06
TMEM39A-210ENST00000490099 AVPP01185 164 aa8.43□□□□□ -1.06
TMEM39A-210ENST00000490099 IGF2P01344 180 aa8.43□□□□□ -1.06
TMEM39A-210ENST00000490099 CRYAAP02489 173 aa8.43□□□□□ -1.06
TMEM39A-210ENST00000490099 IGFBP1P08833 259 aaPredicted RBP8.43□□□□□ -1.06
TMEM39A-210ENST00000490099 CSF3P09919 207 aa8.43□□□□□ -1.06
TMEM39A-210ENST00000490099 ASAH2BP0C7U1 165 aa8.43□□□□□ -1.06
TMEM39A-210ENST00000490099 SLC25A16P16260 332 aa8.43□□□□□ -1.06
TMEM39A-210ENST00000490099 GTF2E2P29084 291 aaKnown RBP8.43□□□□□ -1.06
TMEM39A-210ENST00000490099 CALCRP30988 508 aa8.43□□□□□ -1.06
TMEM39A-210ENST00000490099 NUDT6P53370 316 aa8.43□□□□□ -1.06
TMEM39A-210ENST00000490099 VLDLRP98155 873 aa8.43□□□□□ -1.06
TMEM39A-210ENST00000490099 PPP2R2BQ00005 443 aa8.43□□□□□ -1.06
TMEM39A-210ENST00000490099 PUDPQ08623 228 aa8.43□□□□□ -1.06
TMEM39A-210ENST00000490099 PMS2P3Q13401 168 aa8.43□□□□□ -1.06
TMEM39A-210ENST00000490099 NFYCQ13952 458 aa8.43□□□□□ -1.06
TMEM39A-210ENST00000490099 CYLC2Q14093 348 aaPredicted RBP8.43□□□□□ -1.06
TMEM39A-210ENST00000490099 ZNF74Q16587 644 aa8.43□□□□□ -1.06
TMEM39A-210ENST00000490099 CYP51A1Q16850 503 aa8.43□□□□□ -1.06
TMEM39A-210ENST00000490099 TRMT5Q32P41 509 aaKnown RBP8.43□□□□□ -1.06
TMEM39A-210ENST00000490099 ENTPD8Q5MY95 495 aa8.43□□□□□ -1.06
TMEM39A-210ENST00000490099 CGB2Q6NT52 195 aa8.43□□□□□ -1.06
TMEM39A-210ENST00000490099 CLEC2AQ6UVW9 174 aa8.43□□□□□ -1.06
TMEM39A-210ENST00000490099 MYPOPQ86VE0 399 aaPredicted RBP8.43□□□□□ -1.06
TMEM39A-210ENST00000490099 RBM45Q8IUH3 476 aaKnown RBP8.43□□□□□ -1.06
TMEM39A-210ENST00000490099 UEVLDQ8IX04 471 aa8.43□□□□□ -1.06
TMEM39A-210ENST00000490099 GPR137CQ8N3F9 429 aa8.43□□□□□ -1.06
TMEM39A-210ENST00000490099 ZNF525Q8N782 197 aa8.43□□□□□ -1.06
TMEM39A-210ENST00000490099 OR8J3Q8NGG0 315 aa8.43□□□□□ -1.06
TMEM39A-210ENST00000490099 OR10A6Q8NH74 314 aa8.43□□□□□ -1.06
TMEM39A-210ENST00000490099 OR6X1Q8NH79 312 aa8.43□□□□□ -1.06
TMEM39A-210ENST00000490099 ADAMTS16Q8TE57 1224 aa8.43□□□□□ -1.06
TMEM39A-210ENST00000490099 C10orf82Q8WW14 230 aa8.43□□□□□ -1.06
TMEM39A-210ENST00000490099 LRRC58Q96CX6 371 aa8.43□□□□□ -1.06
TMEM39A-210ENST00000490099 MPP4Q96JB8 637 aa8.43□□□□□ -1.06
TMEM39A-210ENST00000490099 TNFRSF13CQ96RJ3 184 aa8.43□□□□□ -1.06
TMEM39A-210ENST00000490099 SEPHS2Q99611 448 aa8.43□□□□□ -1.06
TMEM39A-210ENST00000490099 PRSS27Q9BQR3 290 aa8.43□□□□□ -1.06
TMEM39A-210ENST00000490099 ASPNQ9BXN1 380 aa8.43□□□□□ -1.06
TMEM39A-210ENST00000490099 SEC61A2Q9H9S3 476 aa8.43□□□□□ -1.06
TMEM39A-210ENST00000490099 SAR1AQ9NR31 198 aa8.43□□□□□ -1.06
TMEM39A-210ENST00000490099 ZNF224Q9NZL3 707 aa8.43□□□□□ -1.06
TMEM39A-210ENST00000490099 SELENONQ9NZV5 590 aa8.43□□□□□ -1.06
TMEM39A-210ENST00000490099 SLC13A4Q9UKG4 626 aa8.43□□□□□ -1.06
TMEM39A-210ENST00000490099 PMF1-BGLAPU3KQ54 211 aa8.43□□□□□ -1.06
TMEM39A-210ENST00000490099 CELA3BP08861 270 aa8.42□□□□□ -1.06
TMEM39A-210ENST00000490099 OR4A8P0C604 315 aa8.42□□□□□ -1.06
TMEM39A-210ENST00000490099 TSPAN19P0C672 248 aa8.42□□□□□ -1.06
TMEM39A-210ENST00000490099 ZNF35P13682 527 aa8.42□□□□□ -1.06
TMEM39A-210ENST00000490099 CBLP22681 906 aa8.42□□□□□ -1.06
TMEM39A-210ENST00000490099 NCALDP61601 193 aa8.42□□□□□ -1.06
TMEM39A-210ENST00000490099 TUBA1BP68363 451 aa8.42□□□□□ -1.06
TMEM39A-210ENST00000490099 TUBA4AP68366 448 aa8.42□□□□□ -1.06
TMEM39A-210ENST00000490099 POU3F1Q03052 451 aaPredicted RBP8.42□□□□□ -1.06
TMEM39A-210ENST00000490099 KLF10Q13118 480 aa8.42□□□□□ -1.06
TMEM39A-210ENST00000490099 TMEM249Q2WGJ8 235 aa8.42□□□□□ -1.06
TMEM39A-210ENST00000490099 INTS11Q5TA45 600 aaKnown RBP8.42□□□□□ -1.06
TMEM39A-210ENST00000490099 LRFN4Q6PJG9 635 aa8.42□□□□□ -1.06
TMEM39A-210ENST00000490099 TUBA1AQ71U36 451 aa8.42□□□□□ -1.06
TMEM39A-210ENST00000490099 VASH1Q7L8A9 365 aaPredicted RBP8.42□□□□□ -1.06
TMEM39A-210ENST00000490099 MDP1Q86V88 176 aa8.42□□□□□ -1.06
TMEM39A-210ENST00000490099 OR5J2Q8NH18 312 aa8.42□□□□□ -1.06
TMEM39A-210ENST00000490099 LIPHQ8WWY8 451 aa8.42□□□□□ -1.06
TMEM39A-210ENST00000490099 FAM168AQ92567 244 aa8.42□□□□□ -1.06
TMEM39A-210ENST00000490099 TMEM54Q969K7 222 aa8.42□□□□□ -1.06
TMEM39A-210ENST00000490099 ZNF583Q96ND8 569 aa8.42□□□□□ -1.06
TMEM39A-210ENST00000490099 SORCS2Q96PQ0 1159 aa8.42□□□□□ -1.06
TMEM39A-210ENST00000490099 MDFIQ99750 246 aa8.42□□□□□ -1.06
TMEM39A-210ENST00000490099 SH3GL1Q99961 368 aa8.42□□□□□ -1.06
TMEM39A-210ENST00000490099 EMC6Q9BV81 110 aa8.42□□□□□ -1.06
TMEM39A-210ENST00000490099 DENND2DQ9H6A0 471 aaPredicted RBP8.42□□□□□ -1.06
TMEM39A-210ENST00000490099 MEPEQ9NQ76 525 aaPredicted RBP8.42□□□□□ -1.06
TMEM39A-210ENST00000490099 MED29Q9NX70 200 aa8.42□□□□□ -1.06
TMEM39A-210ENST00000490099 FBXO9Q9UK97 447 aaPredicted RBP8.42□□□□□ -1.06
TMEM39A-210ENST00000490099 FBN1P35555 2871 aaKnown RBP8.42□□□□□ -1.06
TMEM39A-210ENST00000490099 IGHV2OR16-5A0A0B4J2B6 119 aa8.41□□□□□ -1.06
TMEM39A-210ENST00000490099 M0R3G1 203 aa8.41□□□□□ -1.06
TMEM39A-210ENST00000490099 NDUFS8O00217 210 aa8.41□□□□□ -1.06
TMEM39A-210ENST00000490099 RRP9O43818 475 aaKnown RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms