RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 CCR9P51686 369 aa8.19□□□□□ -1.1
LSAMP-205ENST00000490035 OR2F1Q13607 317 aa8.19□□□□□ -1.1
LSAMP-205ENST00000490035 IL10RAQ13651 578 aa8.19□□□□□ -1.1
LSAMP-205ENST00000490035 CTU2Q2VPK5 515 aaKnown RBP8.19□□□□□ -1.1
LSAMP-205ENST00000490035 PXT1Q8NFP0 134 aa8.19□□□□□ -1.1
LSAMP-205ENST00000490035 DUS3LQ96G46 650 aaKnown RBP8.19□□□□□ -1.1
LSAMP-205ENST00000490035 PRR11Q96HE9 360 aaPredicted RBP8.19□□□□□ -1.1
LSAMP-205ENST00000490035 NOSIPQ9Y314 301 aaKnown RBP8.19□□□□□ -1.1
LSAMP-205ENST00000490035 DDX60LQ5H9U9 1706 aaKnown RBP8.19□□□□□ -1.1
LSAMP-205ENST00000490035 DOC2BQ14184 412 aa8.19□□□□□ -1.1
LSAMP-205ENST00000490035 SPCS2Q15005 226 aa8.19□□□□□ -1.1
LSAMP-205ENST00000490035 METRNLQ641Q3 311 aa8.19□□□□□ -1.1
LSAMP-205ENST00000490035 TMEM71Q6P5X7 295 aa8.19□□□□□ -1.1
LSAMP-205ENST00000490035 LYPD4Q6UWN0 246 aa8.19□□□□□ -1.1
LSAMP-205ENST00000490035 CCDC71Q8IV32 467 aaPredicted RBP8.19□□□□□ -1.1
LSAMP-205ENST00000490035 LGI3Q8N145 548 aa8.19□□□□□ -1.1
LSAMP-205ENST00000490035 KCNRGQ8N5I3 272 aa8.19□□□□□ -1.1
LSAMP-205ENST00000490035 OR4F15Q8NGB8 312 aa8.19□□□□□ -1.1
LSAMP-205ENST00000490035 OR52I1Q8NGK6 324 aa8.19□□□□□ -1.1
LSAMP-205ENST00000490035 OR1E3Q8WZA6 343 aa8.19□□□□□ -1.1
LSAMP-205ENST00000490035 FGGYQ96C11 551 aa8.19□□□□□ -1.1
LSAMP-205ENST00000490035 GNPNAT1Q96EK6 184 aaPredicted RBP8.19□□□□□ -1.1
LSAMP-205ENST00000490035 OR2A14Q96R47 310 aa8.19□□□□□ -1.1
LSAMP-205ENST00000490035 SGPP1Q9BX95 441 aa8.19□□□□□ -1.1
LSAMP-205ENST00000490035 C12orf10Q9HB07 376 aa8.19□□□□□ -1.1
LSAMP-205ENST00000490035 OR52A1Q9UKL2 312 aa8.19□□□□□ -1.1
LSAMP-205ENST00000490035 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.19□□□□□ -1.1
LSAMP-205ENST00000490035 IMPA2O14732 288 aa8.19□□□□□ -1.1
LSAMP-205ENST00000490035 BCAT2O15382 392 aaPredicted RBP8.19□□□□□ -1.1
LSAMP-205ENST00000490035 SCRG1O75711 98 aa8.19□□□□□ -1.1
LSAMP-205ENST00000490035 UTS2O95399 124 aa8.19□□□□□ -1.1
LSAMP-205ENST00000490035 HLA-DMAP28067 261 aa8.19□□□□□ -1.1
LSAMP-205ENST00000490035 SLC10A1Q14973 349 aa8.19□□□□□ -1.1
LSAMP-205ENST00000490035 RNLSQ5VYX0 342 aa8.19□□□□□ -1.1
LSAMP-205ENST00000490035 DHRS4L2Q6PKH6 230 aa8.19□□□□□ -1.1
LSAMP-205ENST00000490035 CATSPERDQ86XM0 798 aa8.19□□□□□ -1.1
LSAMP-205ENST00000490035 VRK2Q86Y07 508 aa8.19□□□□□ -1.1
LSAMP-205ENST00000490035 DMBX1Q8NFW5 382 aa8.19□□□□□ -1.1
LSAMP-205ENST00000490035 NHSL1Q5SYE7 1610 aa8.18□□□□□ -1.1
LSAMP-205ENST00000490035 TMPRSS7Q7RTY8 843 aa8.18□□□□□ -1.1
LSAMP-205ENST00000490035 RNF175Q8N4F7 328 aa8.18□□□□□ -1.1
LSAMP-205ENST00000490035 ZNF416Q9BWM5 594 aa8.18□□□□□ -1.1
LSAMP-205ENST00000490035 PCDHGA1Q9Y5H4 931 aa8.18□□□□□ -1.1
LSAMP-205ENST00000490035 PAPLNO95428 1278 aa8.18□□□□□ -1.1
LSAMP-205ENST00000490035 ATP1B1P05026 303 aa8.18□□□□□ -1.1
LSAMP-205ENST00000490035 GM2AP17900 193 aa8.18□□□□□ -1.1
LSAMP-205ENST00000490035 LAP3P28838 519 aa8.18□□□□□ -1.1
LSAMP-205ENST00000490035 GDNFP39905 211 aa8.18□□□□□ -1.1
LSAMP-205ENST00000490035 GPR85P60893 370 aa8.18□□□□□ -1.1
LSAMP-205ENST00000490035 ARHGAP11BQ3KRB8 267 aa8.18□□□□□ -1.1
LSAMP-205ENST00000490035 IER5LQ5T953 404 aa8.18□□□□□ -1.1
LSAMP-205ENST00000490035 AADACL3Q5VUY0 350 aa8.18□□□□□ -1.1
LSAMP-205ENST00000490035 SHISA4Q96DD7 197 aa8.18□□□□□ -1.1
LSAMP-205ENST00000490035 CMTM3Q96MX0 182 aa8.18□□□□□ -1.1
LSAMP-205ENST00000490035 RYDENQ9NUL5 291 aaKnown RBP8.18□□□□□ -1.1
LSAMP-205ENST00000490035 C5AR2Q9P296 337 aa8.18□□□□□ -1.1
LSAMP-205ENST00000490035 RCE1Q9Y256 329 aa8.18□□□□□ -1.1
LSAMP-205ENST00000490035 ATAD5Q96QE3 1844 aa8.18□□□□□ -1.1
LSAMP-205ENST00000490035 KDM4EB2RXH2 506 aaPredicted RBP8.18□□□□□ -1.1
LSAMP-205ENST00000490035 ZNF814B7Z6K7 855 aa8.18□□□□□ -1.1
LSAMP-205ENST00000490035 LINC01387J3KSC0 135 aa8.18□□□□□ -1.1
LSAMP-205ENST00000490035 MT-ND4P03905 459 aa8.18□□□□□ -1.1
LSAMP-205ENST00000490035 ZNF728P0DKX0 622 aa8.18□□□□□ -1.1
LSAMP-205ENST00000490035 ACHEP22303 614 aa8.18□□□□□ -1.1
LSAMP-205ENST00000490035 DUSP1P28562 367 aa8.18□□□□□ -1.1
LSAMP-205ENST00000490035 CARD18P57730 90 aa8.18□□□□□ -1.1
LSAMP-205ENST00000490035 RAC1P63000 192 aa8.18□□□□□ -1.1
LSAMP-205ENST00000490035 OPCMLQ14982 345 aa8.18□□□□□ -1.1
LSAMP-205ENST00000490035 PXDC1Q5TGL8 231 aa8.18□□□□□ -1.1
LSAMP-205ENST00000490035 DOK3Q7L591 496 aa8.18□□□□□ -1.1
LSAMP-205ENST00000490035 AAED1Q7RTV5 226 aa8.18□□□□□ -1.1
LSAMP-205ENST00000490035 CD163Q86VB7 1156 aa8.18□□□□□ -1.1
LSAMP-205ENST00000490035 CHAC2Q8WUX2 184 aa8.18□□□□□ -1.1
LSAMP-205ENST00000490035 SLC46A2Q9BY10 475 aa8.18□□□□□ -1.1
LSAMP-205ENST00000490035 RIMS4Q9H426 269 aaPredicted RBP8.18□□□□□ -1.1
LSAMP-205ENST00000490035 HOXC11O43248 304 aaPredicted RBP8.18□□□□□ -1.1
LSAMP-205ENST00000490035 TIMM8AO60220 97 aaPredicted RBP8.18□□□□□ -1.1
LSAMP-205ENST00000490035 LGI1O95970 557 aa8.18□□□□□ -1.1
LSAMP-205ENST00000490035 ABOP16442 354 aa8.18□□□□□ -1.1
LSAMP-205ENST00000490035 HLA-FP30511 346 aa8.18□□□□□ -1.1
LSAMP-205ENST00000490035 C18orf21Q32NC0 220 aaPredicted RBP8.18□□□□□ -1.1
LSAMP-205ENST00000490035 OR51L1Q8NGJ5 315 aa8.18□□□□□ -1.1
LSAMP-205ENST00000490035 GAB3Q8WWW8 586 aa8.18□□□□□ -1.1
LSAMP-205ENST00000490035 TMEM106AQ96A25 262 aa8.18□□□□□ -1.1
LSAMP-205ENST00000490035 ADAM19Q9H013 955 aa8.18□□□□□ -1.1
LSAMP-205ENST00000490035 NDUFB11Q9NX14 153 aa8.18□□□□□ -1.1
LSAMP-205ENST00000490035 MRPS28Q9Y2Q9 187 aaKnown RBP8.18□□□□□ -1.1
LSAMP-205ENST00000490035 A0A087WV62 115 aa8.18□□□□□ -1.1
LSAMP-205ENST00000490035 A0A1B0GTW7 788 aa8.18□□□□□ -1.1
LSAMP-205ENST00000490035 GIPP09681 153 aaPredicted RBP8.18□□□□□ -1.1
LSAMP-205ENST00000490035 WNT7BP56706 349 aa8.18□□□□□ -1.1
LSAMP-205ENST00000490035 SEC61A1P61619 476 aaKnown RBP8.18□□□□□ -1.1
LSAMP-205ENST00000490035 SNRPD2P62316 118 aaKnown RBP8.18□□□□□ -1.1
LSAMP-205ENST00000490035 CTBSQ01459 385 aa8.18□□□□□ -1.1
LSAMP-205ENST00000490035 C19orf35Q6ZS72 473 aa8.18□□□□□ -1.1
LSAMP-205ENST00000490035 FAM57BQ71RH2 274 aa8.18□□□□□ -1.1
LSAMP-205ENST00000490035 NAXDQ8IW45 347 aa8.18□□□□□ -1.1
LSAMP-205ENST00000490035 OIT3Q8WWZ8 545 aa8.18□□□□□ -1.1
LSAMP-205ENST00000490035 GHSRQ92847 366 aa8.18□□□□□ -1.1
LSAMP-205ENST00000490035 ULBP3Q9BZM4 244 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms