RNA–Protein interactions for RNA: ENST00000489948.5

TRAIP-210, Transcript of TRAF interacting protein, humanhuman

TSL 4

Gene TRAIP, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-210ENST00000489948 TM9SF2Q99805 663 aa11.89□□□□□ -0.51
TRAIP-210ENST00000489948 GRHPRQ9UBQ7 328 aa11.89□□□□□ -0.51
TRAIP-210ENST00000489948 LRRC42Q9Y546 428 aa11.89□□□□□ -0.51
TRAIP-210ENST00000489948 FAM215AQ9Y5M1 114 aa11.89□□□□□ -0.51
TRAIP-210ENST00000489948 IER3IP1Q9Y5U9 82 aa11.89□□□□□ -0.51
TRAIP-210ENST00000489948 TEX13CA0A0J9YWL9 993 aa11.88□□□□□ -0.51
TRAIP-210ENST00000489948 RIIAD1A6NNX1 92 aa11.88□□□□□ -0.51
TRAIP-210ENST00000489948 ZNF432O94892 652 aa11.88□□□□□ -0.51
TRAIP-210ENST00000489948 TGM6O95932 706 aa11.88□□□□□ -0.51
TRAIP-210ENST00000489948 BCL10O95999 233 aa11.88□□□□□ -0.51
TRAIP-210ENST00000489948 PLGP00747 810 aaPredicted RBP11.88□□□□□ -0.51
TRAIP-210ENST00000489948 GNAO1P09471 354 aa11.88□□□□□ -0.51
TRAIP-210ENST00000489948 IFNGR1P15260 489 aa11.88□□□□□ -0.51
TRAIP-210ENST00000489948 ACADSP16219 412 aa11.88□□□□□ -0.51
TRAIP-210ENST00000489948 HIST1H1CP16403 213 aaKnown RBP11.88□□□□□ -0.51
TRAIP-210ENST00000489948 ZNF3P17036 446 aa11.88□□□□□ -0.51
TRAIP-210ENST00000489948 GABRB1P18505 474 aa11.88□□□□□ -0.51
TRAIP-210ENST00000489948 NOS3P29474 1203 aa11.88□□□□□ -0.51
TRAIP-210ENST00000489948 MLLT10P55197 1068 aa11.88□□□□□ -0.51
TRAIP-210ENST00000489948 SNRPGP62308 76 aaKnown RBP11.88□□□□□ -0.51
TRAIP-210ENST00000489948 C1DQ13901 141 aaKnown RBP11.88□□□□□ -0.51
TRAIP-210ENST00000489948 TMEM201Q5SNT2 666 aa11.88□□□□□ -0.51
TRAIP-210ENST00000489948 ZNF362Q5T0B9 420 aaPredicted RBP11.88□□□□□ -0.51
TRAIP-210ENST00000489948 EEF1A1P5Q5VTE0 462 aa11.88□□□□□ -0.51
TRAIP-210ENST00000489948 RTL6Q6ICC9 239 aa11.88□□□□□ -0.51
TRAIP-210ENST00000489948 ZNF585AQ6P3V2 769 aa11.88□□□□□ -0.51
TRAIP-210ENST00000489948 ENTHD1Q8IYW4 607 aa11.88□□□□□ -0.51
TRAIP-210ENST00000489948 ZIC4Q8N9L1 334 aa11.88□□□□□ -0.51
TRAIP-210ENST00000489948 FNDC8Q8TC99 324 aa11.88□□□□□ -0.51
TRAIP-210ENST00000489948 RASD2Q96D21 266 aa11.88□□□□□ -0.51
TRAIP-210ENST00000489948 Q96M85 177 aa11.88□□□□□ -0.51
TRAIP-210ENST00000489948 TRIB1Q96RU8 372 aa11.88□□□□□ -0.51
TRAIP-210ENST00000489948 ALG12Q9BV10 488 aa11.88□□□□□ -0.51
TRAIP-210ENST00000489948 PRRG4Q9BZD6 226 aa11.88□□□□□ -0.51
TRAIP-210ENST00000489948 IMPAD1Q9NX62 359 aa11.88□□□□□ -0.51
TRAIP-210ENST00000489948 VSX1Q9NZR4 365 aaPredicted RBP11.88□□□□□ -0.51
TRAIP-210ENST00000489948 ZNF346Q9UL40 294 aaKnown RBP11.88□□□□□ -0.51
TRAIP-210ENST00000489948 CYSRT1A8MQ03 144 aa11.87□□□□□ -0.51
TRAIP-210ENST00000489948 XKRYO14609 159 aa11.87□□□□□ -0.51
TRAIP-210ENST00000489948 IGHG1P01857 330 aa11.87□□□□□ -0.51
TRAIP-210ENST00000489948 CRHP06850 196 aa11.87□□□□□ -0.51
TRAIP-210ENST00000489948 PGA4P0DJD7 388 aa11.87□□□□□ -0.51
TRAIP-210ENST00000489948 PGA3P0DJD8 388 aa11.87□□□□□ -0.51
TRAIP-210ENST00000489948 NR2C1P13056 603 aa11.87□□□□□ -0.51
TRAIP-210ENST00000489948 AGTR1P30556 359 aa11.87□□□□□ -0.51
TRAIP-210ENST00000489948 TIMP3P35625 211 aa11.87□□□□□ -0.51
TRAIP-210ENST00000489948 ISL1P61371 349 aa11.87□□□□□ -0.51
TRAIP-210ENST00000489948 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.87□□□□□ -0.51
TRAIP-210ENST00000489948 TOP3AQ13472 1001 aaPredicted RBP11.87□□□□□ -0.51
TRAIP-210ENST00000489948 MAD2L1BPQ15013 274 aaPredicted RBP11.87□□□□□ -0.51
TRAIP-210ENST00000489948 SNAPC1Q16533 368 aa11.87□□□□□ -0.51
TRAIP-210ENST00000489948 RPTNQ6XPR3 784 aa11.87□□□□□ -0.51
TRAIP-210ENST00000489948 B3GNT6Q6ZMB0 384 aa11.87□□□□□ -0.51
TRAIP-210ENST00000489948 P4HA3Q7Z4N8 544 aa11.87□□□□□ -0.51
TRAIP-210ENST00000489948 THAP5Q7Z6K1 395 aa11.87□□□□□ -0.51
TRAIP-210ENST00000489948 JAZF1Q86VZ6 243 aa11.87□□□□□ -0.51
TRAIP-210ENST00000489948 DOLPP1Q86YN1 238 aa11.87□□□□□ -0.51
TRAIP-210ENST00000489948 TMEM123Q8N131 208 aa11.87□□□□□ -0.51
TRAIP-210ENST00000489948 MARVELD2Q8N4S9 558 aa11.87□□□□□ -0.51
TRAIP-210ENST00000489948 NPEPL1Q8NDH3 523 aa11.87□□□□□ -0.51
TRAIP-210ENST00000489948 NOXO1Q8NFA2 376 aa11.87□□□□□ -0.51
TRAIP-210ENST00000489948 RHOXF1Q8NHV9 184 aa11.87□□□□□ -0.51
TRAIP-210ENST00000489948 TMEM163Q8TC26 289 aa11.87□□□□□ -0.51
TRAIP-210ENST00000489948 SLC25A44Q96H78 314 aaPredicted RBP11.87□□□□□ -0.51
TRAIP-210ENST00000489948 PLEKHA8Q96JA3 519 aa11.87□□□□□ -0.51
TRAIP-210ENST00000489948 MUS81Q96NY9 551 aa11.87□□□□□ -0.51
TRAIP-210ENST00000489948 ZNF385AQ96PM9 386 aaKnown RBP11.87□□□□□ -0.51
TRAIP-210ENST00000489948 KCNK17Q96T54 332 aa11.87□□□□□ -0.51
TRAIP-210ENST00000489948 DDOQ99489 341 aa11.87□□□□□ -0.51
TRAIP-210ENST00000489948 MRPL13Q9BYD1 178 aaKnown RBP11.87□□□□□ -0.51
TRAIP-210ENST00000489948 MED29Q9NX70 200 aa11.87□□□□□ -0.51
TRAIP-210ENST00000489948 TVP23BQ9NYZ1 205 aa11.87□□□□□ -0.51
TRAIP-210ENST00000489948 RNF6Q9Y252 685 aa11.87□□□□□ -0.51
TRAIP-210ENST00000489948 GCN1Q92616 2671 aaKnown RBP11.86□□□□□ -0.51
TRAIP-210ENST00000489948 PRSS37A4D1T9 235 aa11.86□□□□□ -0.51
TRAIP-210ENST00000489948 OR6C65A6NJZ3 312 aa11.86□□□□□ -0.51
TRAIP-210ENST00000489948 KDM4EB2RXH2 506 aaPredicted RBP11.86□□□□□ -0.51
TRAIP-210ENST00000489948 M0R3G1 203 aa11.86□□□□□ -0.51
TRAIP-210ENST00000489948 ZNHIT1O43257 154 aa11.86□□□□□ -0.51
TRAIP-210ENST00000489948 PRKYO43930 277 aa11.86□□□□□ -0.51
TRAIP-210ENST00000489948 SERPINI2O75830 405 aa11.86□□□□□ -0.51
TRAIP-210ENST00000489948 CLIC3O95833 236 aa11.86□□□□□ -0.51
TRAIP-210ENST00000489948 YES1P07947 543 aa11.86□□□□□ -0.51
TRAIP-210ENST00000489948 PAICSP22234 425 aaKnown RBP11.86□□□□□ -0.51
TRAIP-210ENST00000489948 ACVR1BP36896 505 aa11.86□□□□□ -0.51
TRAIP-210ENST00000489948 ZNF133P52736 654 aaPredicted RBP11.86□□□□□ -0.51
TRAIP-210ENST00000489948 SLC25A1P53007 311 aa11.86□□□□□ -0.51
TRAIP-210ENST00000489948 BIDP55957 195 aa11.86□□□□□ -0.51
TRAIP-210ENST00000489948 CLDN17P56750 224 aa11.86□□□□□ -0.51
TRAIP-210ENST00000489948 CRMP1Q14194 572 aa11.86□□□□□ -0.51
TRAIP-210ENST00000489948 MELKQ14680 651 aa11.86□□□□□ -0.51
TRAIP-210ENST00000489948 HIST3H3Q16695 136 aa11.86□□□□□ -0.51
TRAIP-210ENST00000489948 MEDAGQ5VYS4 303 aa11.86□□□□□ -0.51
TRAIP-210ENST00000489948 SEM1Q6ZVN7 128 aa11.86□□□□□ -0.51
TRAIP-210ENST00000489948 PTCHD4Q6ZW05 846 aa11.86□□□□□ -0.51
TRAIP-210ENST00000489948 MCEMP1Q8IX19 187 aa11.86□□□□□ -0.51
TRAIP-210ENST00000489948 FAM26EQ8N5C1 309 aa11.86□□□□□ -0.51
TRAIP-210ENST00000489948 C9orf106Q8NAJ2 232 aa11.86□□□□□ -0.51
TRAIP-210ENST00000489948 SLC37A3Q8NCC5 494 aa11.86□□□□□ -0.51
TRAIP-210ENST00000489948 SDR9C7Q8NEX9 313 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms