RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 EXOSC8Q96B26 276 aaKnown RBP2.71□□□□□ -1.98
CCDC39-206ENST00000489868 CXorf40BQ96DE9 158 aa2.71□□□□□ -1.98
CCDC39-206ENST00000489868 ZNF641Q96N77 438 aaPredicted RBP2.71□□□□□ -1.98
CCDC39-206ENST00000489868 TTC25Q96NG3 672 aa2.71□□□□□ -1.98
CCDC39-206ENST00000489868 ECSITQ9BQ95 431 aa2.71□□□□□ -1.98
CCDC39-206ENST00000489868 CHAC1Q9BUX1 264 aa2.71□□□□□ -1.98
CCDC39-206ENST00000489868 PARD6BQ9BYG5 372 aa2.71□□□□□ -1.98
CCDC39-206ENST00000489868 PTBP2Q9UKA9 531 aaKnown RBP2.71□□□□□ -1.98
CCDC39-206ENST00000489868 AP1M2Q9Y6Q5 423 aa2.71□□□□□ -1.98
CCDC39-206ENST00000489868 WDR62O43379 1518 aa2.71□□□□□ -1.98
CCDC39-206ENST00000489868 CEMIPQ8WUJ3 1361 aa2.71□□□□□ -1.98
CCDC39-206ENST00000489868 KIF16BQ96L93 1317 aa2.7□□□□□ -1.98
CCDC39-206ENST00000489868 DOCK9Q9BZ29 2069 aa2.7□□□□□ -1.98
CCDC39-206ENST00000489868 A0A1B0GVI7 797 aa2.7□□□□□ -1.98
CCDC39-206ENST00000489868 H3BNH8 94 aa2.7□□□□□ -1.98
CCDC39-206ENST00000489868 MUC1P15941 1255 aaPredicted RBP2.7□□□□□ -1.98
CCDC39-206ENST00000489868 ERVK-25P63136 954 aa2.7□□□□□ -1.98
CCDC39-206ENST00000489868 AQP6Q13520 282 aa2.7□□□□□ -1.98
CCDC39-206ENST00000489868 KLHL38Q2WGJ6 581 aa2.7□□□□□ -1.98
CCDC39-206ENST00000489868 ZBED5Q49AG3 693 aa2.7□□□□□ -1.98
CCDC39-206ENST00000489868 COA6Q5JTJ3 125 aaKnown RBP2.7□□□□□ -1.98
CCDC39-206ENST00000489868 C19orf35Q6ZS72 473 aa2.7□□□□□ -1.98
CCDC39-206ENST00000489868 FAM92BQ6ZTR7 304 aa2.7□□□□□ -1.98
CCDC39-206ENST00000489868 ZSCAN30Q86W11 494 aa2.7□□□□□ -1.98
CCDC39-206ENST00000489868 TRIM69Q86WT6 500 aa2.7□□□□□ -1.98
CCDC39-206ENST00000489868 PLA2G4DQ86XP0 818 aa2.7□□□□□ -1.98
CCDC39-206ENST00000489868 PYROXD1Q8WU10 500 aa2.7□□□□□ -1.98
CCDC39-206ENST00000489868 MS4A4EQ96PG1 132 aa2.7□□□□□ -1.98
CCDC39-206ENST00000489868 OR2A5Q96R48 311 aa2.7□□□□□ -1.98
CCDC39-206ENST00000489868 GABARAPL3Q9BY60 117 aa2.7□□□□□ -1.98
CCDC39-206ENST00000489868 TM9SF3Q9HD45 589 aa2.7□□□□□ -1.98
CCDC39-206ENST00000489868 ADAP2Q9NPF8 381 aa2.7□□□□□ -1.98
CCDC39-206ENST00000489868 PACSIN2Q9UNF0 486 aaPredicted RBP2.7□□□□□ -1.98
CCDC39-206ENST00000489868 TOM1O60784 492 aa2.69□□□□□ -1.98
CCDC39-206ENST00000489868 CISD3P0C7P0 127 aa2.69□□□□□ -1.98
CCDC39-206ENST00000489868 ATP1B3P54709 279 aa2.69□□□□□ -1.98
CCDC39-206ENST00000489868 RPS21P63220 83 aaKnown RBP2.69□□□□□ -1.98
CCDC39-206ENST00000489868 SLC7A9P82251 487 aa2.69□□□□□ -1.98
CCDC39-206ENST00000489868 KLHL30Q0D2K2 578 aa2.69□□□□□ -1.98
CCDC39-206ENST00000489868 KRTAP13-2Q52LG2 175 aa2.69□□□□□ -1.98
CCDC39-206ENST00000489868 UQCC3Q6UW78 93 aa2.69□□□□□ -1.98
CCDC39-206ENST00000489868 NCCRP1Q6ZVX7 275 aaPredicted RBP2.69□□□□□ -1.98
CCDC39-206ENST00000489868 NUDCD3Q8IVD9 361 aa2.69□□□□□ -1.98
CCDC39-206ENST00000489868 OR5W2Q8NH69 310 aa2.69□□□□□ -1.98
CCDC39-206ENST00000489868 RLN3Q8WXF3 142 aa2.69□□□□□ -1.98
CCDC39-206ENST00000489868 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.69□□□□□ -1.98
CCDC39-206ENST00000489868 SYAP1Q96A49 352 aaPredicted RBP2.69□□□□□ -1.98
CCDC39-206ENST00000489868 SGK3Q96BR1 496 aa2.69□□□□□ -1.98
CCDC39-206ENST00000489868 COQ2Q96H96 371 aa2.69□□□□□ -1.98
CCDC39-206ENST00000489868 ERP44Q9BS26 406 aa2.69□□□□□ -1.98
CCDC39-206ENST00000489868 ZNF2Q9BSG1 426 aaPredicted RBP2.69□□□□□ -1.98
CCDC39-206ENST00000489868 NDFIP1Q9BT67 221 aa2.69□□□□□ -1.98
CCDC39-206ENST00000489868 POLE4Q9NR33 117 aa2.69□□□□□ -1.98
CCDC39-206ENST00000489868 BFARQ9NZS9 450 aa2.69□□□□□ -1.98
CCDC39-206ENST00000489868 IGKV1D-17A0A075B6S4 117 aa2.68□□□□□ -1.98
CCDC39-206ENST00000489868 IGHV5-51A0A0C4DH38 117 aa2.68□□□□□ -1.98
CCDC39-206ENST00000489868 IGHV3-66A0A0C4DH42 116 aa2.68□□□□□ -1.98
CCDC39-206ENST00000489868 ZNF705GA8MUZ8 300 aaPredicted RBP2.68□□□□□ -1.98
CCDC39-206ENST00000489868 H0YHG0 523 aa2.68□□□□□ -1.98
CCDC39-206ENST00000489868 XKRYO14609 159 aa2.68□□□□□ -1.98
CCDC39-206ENST00000489868 B4GALT5O43286 388 aa2.68□□□□□ -1.98
CCDC39-206ENST00000489868 UPK3AO75631 287 aa2.68□□□□□ -1.98
CCDC39-206ENST00000489868 IGKV1-17P01599 117 aa2.68□□□□□ -1.98
CCDC39-206ENST00000489868 SMIM10L1P0DMW3 83 aa2.68□□□□□ -1.98
CCDC39-206ENST00000489868 GRIA1P42261 906 aa2.68□□□□□ -1.98
CCDC39-206ENST00000489868 GPR6P46095 362 aaPredicted RBP2.68□□□□□ -1.98
CCDC39-206ENST00000489868 SUB1P53999 127 aaKnown RBP eCLIP2.68□□□□□ -1.98
CCDC39-206ENST00000489868 NCBP1Q09161 790 aaKnown RBP2.68□□□□□ -1.98
CCDC39-206ENST00000489868 UBE2SQ16763 222 aa2.68□□□□□ -1.98
CCDC39-206ENST00000489868 DGUOKQ16854 277 aa2.68□□□□□ -1.98
CCDC39-206ENST00000489868 NANOGP8Q6NSW7 305 aa2.68□□□□□ -1.98
CCDC39-206ENST00000489868 TRIM40Q6P9F5 258 aa2.68□□□□□ -1.98
CCDC39-206ENST00000489868 ENPP6Q6UWR7 440 aa2.68□□□□□ -1.98
CCDC39-206ENST00000489868 ZNF836Q6ZNA1 936 aa2.68□□□□□ -1.98
CCDC39-206ENST00000489868 HMGN2P46Q86SG4 172 aa2.68□□□□□ -1.98
CCDC39-206ENST00000489868 SMIM10Q96HG1 83 aa2.68□□□□□ -1.98
CCDC39-206ENST00000489868 RIOK1Q9BRS2 568 aaKnown RBP2.68□□□□□ -1.98
CCDC39-206ENST00000489868 CGNQ9P2M7 1197 aaKnown RBP2.68□□□□□ -1.98
CCDC39-206ENST00000489868 OR12D3Q9UGF7 316 aa2.68□□□□□ -1.98
CCDC39-206ENST00000489868 CD84Q9UIB8 345 aa2.68□□□□□ -1.98
CCDC39-206ENST00000489868 MSH6P52701 1360 aa2.67□□□□□ -1.98
CCDC39-206ENST00000489868 A0A0U1RQS6 177 aa2.67□□□□□ -1.98
CCDC39-206ENST00000489868 CIB4A0PJX0 185 aa2.67□□□□□ -1.98
CCDC39-206ENST00000489868 CCDC182A6NF36 153 aa2.67□□□□□ -1.98
CCDC39-206ENST00000489868 INS-IGF2F8WCM5 200 aa2.67□□□□□ -1.98
CCDC39-206ENST00000489868 PRPS2P11908 318 aa2.67□□□□□ -1.98
CCDC39-206ENST00000489868 ZNF14P17017 642 aaPredicted RBP2.67□□□□□ -1.98
CCDC39-206ENST00000489868 TCN1P20061 433 aaPredicted RBP2.67□□□□□ -1.98
CCDC39-206ENST00000489868 CCT3P49368 545 aaKnown RBP2.67□□□□□ -1.98
CCDC39-206ENST00000489868 SCRN3Q0VDG4 424 aa2.67□□□□□ -1.98
CCDC39-206ENST00000489868 UTS2BQ765I0 119 aa2.67□□□□□ -1.98
CCDC39-206ENST00000489868 GEMIN6Q8WXD5 167 aaKnown RBP2.67□□□□□ -1.98
CCDC39-206ENST00000489868 RBM14Q96PK6 669 aaKnown RBP2.67□□□□□ -1.98
CCDC39-206ENST00000489868 TSSK3Q96PN8 268 aa2.67□□□□□ -1.98
CCDC39-206ENST00000489868 RPP21Q9H633 154 aaKnown RBP2.67□□□□□ -1.98
CCDC39-206ENST00000489868 EXD2Q9NVH0 621 aa2.67□□□□□ -1.98
CCDC39-206ENST00000489868 MARCOQ9UEW3 520 aaPredicted RBP2.67□□□□□ -1.98
CCDC39-206ENST00000489868 ZNF726A6NNF4 738 aa2.66□□□□□ -1.98
CCDC39-206ENST00000489868 FCMRO60667 390 aa2.66□□□□□ -1.98
CCDC39-206ENST00000489868 SNNO75324 88 aaPredicted RBP2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms