RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 NDEL1Q9GZM8 345 aa12.66□□□□□ -0.38
CLDN11-209ENST00000489485 BCO1Q9HAY6 547 aa12.66□□□□□ -0.38
CLDN11-209ENST00000489485 ING1Q9UK53 422 aaPredicted RBP12.66□□□□□ -0.38
CLDN11-209ENST00000489485 IER3IP1Q9Y5U9 82 aa12.66□□□□□ -0.38
CLDN11-209ENST00000489485 FLVCR1Q9Y5Y0 555 aa12.66□□□□□ -0.38
CLDN11-209ENST00000489485 IGKV3D-15A0A087WSY6 115 aa12.65□□□□□ -0.38
CLDN11-209ENST00000489485 LOC102725191A0A1B0GVB3 256 aa12.65□□□□□ -0.38
CLDN11-209ENST00000489485 A0A1W2PRG6 482 aa12.65□□□□□ -0.38
CLDN11-209ENST00000489485 M0R129 80 aa12.65□□□□□ -0.38
CLDN11-209ENST00000489485 IFNGR1P15260 489 aa12.65□□□□□ -0.38
CLDN11-209ENST00000489485 TOP3AQ13472 1001 aaPredicted RBP12.65□□□□□ -0.38
CLDN11-209ENST00000489485 PDK3Q15120 406 aa12.65□□□□□ -0.38
CLDN11-209ENST00000489485 FAM214BQ7L5A3 538 aa12.65□□□□□ -0.38
CLDN11-209ENST00000489485 CCDC71Q8IV32 467 aaPredicted RBP12.65□□□□□ -0.38
CLDN11-209ENST00000489485 UBE2FQ969M7 185 aa12.65□□□□□ -0.38
CLDN11-209ENST00000489485 ZFP3Q96NJ6 502 aa12.65□□□□□ -0.38
CLDN11-209ENST00000489485 ERMAPQ96PL5 475 aaPredicted RBP12.65□□□□□ -0.38
CLDN11-209ENST00000489485 ZNF385AQ96PM9 386 aaKnown RBP12.65□□□□□ -0.38
CLDN11-209ENST00000489485 POLDIP3Q9BY77 421 aaKnown RBP12.65□□□□□ -0.38
CLDN11-209ENST00000489485 FANCFQ9NPI8 374 aa12.65□□□□□ -0.38
CLDN11-209ENST00000489485 NRIP3Q9NQ35 241 aa12.65□□□□□ -0.38
CLDN11-209ENST00000489485 MED29Q9NX70 200 aa12.65□□□□□ -0.38
CLDN11-209ENST00000489485 TVP23BQ9NYZ1 205 aa12.65□□□□□ -0.38
CLDN11-209ENST00000489485 NOSIPQ9Y314 301 aaKnown RBP12.65□□□□□ -0.38
CLDN11-209ENST00000489485 EMC9Q9Y3B6 208 aa12.65□□□□□ -0.38
CLDN11-209ENST00000489485 FLNCQ14315 2725 aa12.65□□□□□ -0.38
CLDN11-209ENST00000489485 FREM1Q5H8C1 2179 aa12.65□□□□□ -0.38
CLDN11-209ENST00000489485 A0A0G2JNJ9 132 aa12.65□□□□□ -0.38
CLDN11-209ENST00000489485 ZNF724A8MTY0 619 aa12.65□□□□□ -0.38
CLDN11-209ENST00000489485 E9PQ18 207 aa12.65□□□□□ -0.38
CLDN11-209ENST00000489485 SS18L1O75177 396 aaPredicted RBP12.65□□□□□ -0.38
CLDN11-209ENST00000489485 CD14P08571 375 aa12.65□□□□□ -0.38
CLDN11-209ENST00000489485 CALRP27797 417 aaKnown RBP12.65□□□□□ -0.38
CLDN11-209ENST00000489485 AGTR1P30556 359 aa12.65□□□□□ -0.38
CLDN11-209ENST00000489485 CEACAM8P31997 349 aaPredicted RBP12.65□□□□□ -0.38
CLDN11-209ENST00000489485 GGT2P36268 569 aa12.65□□□□□ -0.38
CLDN11-209ENST00000489485 CLDN17P56750 224 aa12.65□□□□□ -0.38
CLDN11-209ENST00000489485 KEAP1Q14145 624 aa12.65□□□□□ -0.38
CLDN11-209ENST00000489485 PGGHGQ32M88 737 aa12.65□□□□□ -0.38
CLDN11-209ENST00000489485 C4orf17Q53FE4 359 aa12.65□□□□□ -0.38
CLDN11-209ENST00000489485 RIPPLY2Q5TAB7 128 aa12.65□□□□□ -0.38
CLDN11-209ENST00000489485 SLX4IPQ5VYV7 408 aa12.65□□□□□ -0.38
CLDN11-209ENST00000489485 CASP12Q6UXS9 341 aa12.65□□□□□ -0.38
CLDN11-209ENST00000489485 SLC35D2Q76EJ3 337 aa12.65□□□□□ -0.38
CLDN11-209ENST00000489485 LNX2Q8N448 690 aa12.65□□□□□ -0.38
CLDN11-209ENST00000489485 FAM81AQ8TBF8 368 aa12.65□□□□□ -0.38
CLDN11-209ENST00000489485 TXNDC15Q96J42 360 aa12.65□□□□□ -0.38
CLDN11-209ENST00000489485 CNBD2Q96M20 576 aa12.65□□□□□ -0.38
CLDN11-209ENST00000489485 GPX7Q96SL4 187 aaPredicted RBP12.65□□□□□ -0.38
CLDN11-209ENST00000489485 EMC6Q9BV81 110 aa12.65□□□□□ -0.38
CLDN11-209ENST00000489485 C12orf49Q9H741 205 aa12.65□□□□□ -0.38
CLDN11-209ENST00000489485 SLC25A19Q9HC21 320 aa12.65□□□□□ -0.38
CLDN11-209ENST00000489485 GP6Q9HCN6 339 aa12.65□□□□□ -0.38
CLDN11-209ENST00000489485 GRHPRQ9UBQ7 328 aa12.65□□□□□ -0.38
CLDN11-209ENST00000489485 Q9UFV3 132 aa12.65□□□□□ -0.38
CLDN11-209ENST00000489485 DPPA5A6NC42 116 aa12.64□□□□□ -0.39
CLDN11-209ENST00000489485 HSPB2A8KAH6 182 aa12.64□□□□□ -0.39
CLDN11-209ENST00000489485 TRAF3IP2O43734 574 aaPredicted RBP12.64□□□□□ -0.39
CLDN11-209ENST00000489485 MRPL33O75394 65 aaKnown RBP12.64□□□□□ -0.39
CLDN11-209ENST00000489485 BCL10O95999 233 aa12.64□□□□□ -0.39
CLDN11-209ENST00000489485 CDC42P60953 191 aa12.64□□□□□ -0.39
CLDN11-209ENST00000489485 MELKQ14680 651 aa12.64□□□□□ -0.39
CLDN11-209ENST00000489485 HSPB2Q16082 182 aa12.64□□□□□ -0.39
CLDN11-209ENST00000489485 SNAPC1Q16533 368 aa12.64□□□□□ -0.39
CLDN11-209ENST00000489485 ACKR1Q16570 336 aa12.64□□□□□ -0.39
CLDN11-209ENST00000489485 ZIC4Q8N9L1 334 aa12.64□□□□□ -0.39
CLDN11-209ENST00000489485 CCDC120Q96HB5 630 aa12.64□□□□□ -0.39
CLDN11-209ENST00000489485 Q96M85 177 aa12.64□□□□□ -0.39
CLDN11-209ENST00000489485 TSPAN32Q96QS1 320 aa12.64□□□□□ -0.39
CLDN11-209ENST00000489485 PITX2Q99697 317 aa12.64□□□□□ -0.39
CLDN11-209ENST00000489485 TEX12Q9BXU0 123 aa12.64□□□□□ -0.39
CLDN11-209ENST00000489485 RASSF1Q9NS23 344 aa12.64□□□□□ -0.39
CLDN11-209ENST00000489485 AASSQ9UDR5 926 aa12.64□□□□□ -0.39
CLDN11-209ENST00000489485 ZNF346Q9UL40 294 aaKnown RBP12.64□□□□□ -0.39
CLDN11-209ENST00000489485 SLC2A10O95528 541 aa12.63□□□□□ -0.39
CLDN11-209ENST00000489485 BMP5P22003 454 aa12.63□□□□□ -0.39
CLDN11-209ENST00000489485 CTSSP25774 331 aa12.63□□□□□ -0.39
CLDN11-209ENST00000489485 NTF4P34130 210 aa12.63□□□□□ -0.39
CLDN11-209ENST00000489485 KIR2DL2P43627 348 aaPredicted RBP12.63□□□□□ -0.39
CLDN11-209ENST00000489485 RPS6KA3P51812 740 aa12.63□□□□□ -0.39
CLDN11-209ENST00000489485 BIDP55957 195 aa12.63□□□□□ -0.39
CLDN11-209ENST00000489485 ZNF691Q5VV52 312 aa12.63□□□□□ -0.39
CLDN11-209ENST00000489485 C12orf73Q69YU5 71 aa12.63□□□□□ -0.39
CLDN11-209ENST00000489485 NIPAL3Q6P499 406 aa12.63□□□□□ -0.39
CLDN11-209ENST00000489485 VWA1Q6PCB0 445 aa12.63□□□□□ -0.39
CLDN11-209ENST00000489485 USP51Q70EK9 711 aa12.63□□□□□ -0.39
CLDN11-209ENST00000489485 AAED1Q7RTV5 226 aa12.63□□□□□ -0.39
CLDN11-209ENST00000489485 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.63□□□□□ -0.39
CLDN11-209ENST00000489485 FAM122BQ7Z309 247 aa12.63□□□□□ -0.39
CLDN11-209ENST00000489485 NUFIP2Q7Z417 695 aaKnown RBP12.63□□□□□ -0.39
CLDN11-209ENST00000489485 RASD2Q96D21 266 aa12.63□□□□□ -0.39
CLDN11-209ENST00000489485 IL4I1Q96RQ9 567 aa12.63□□□□□ -0.39
CLDN11-209ENST00000489485 APOL4Q9BPW4 351 aa12.63□□□□□ -0.39
CLDN11-209ENST00000489485 ANKRD60Q9BZ19 345 aa12.63□□□□□ -0.39
CLDN11-209ENST00000489485 FAM192AQ9GZU8 254 aa12.63□□□□□ -0.39
CLDN11-209ENST00000489485 Q9H521 79 aa12.63□□□□□ -0.39
CLDN11-209ENST00000489485 PARPBPQ9NWS1 579 aa12.63□□□□□ -0.39
CLDN11-209ENST00000489485 IMPAD1Q9NX62 359 aa12.63□□□□□ -0.39
CLDN11-209ENST00000489485 GPR52Q9Y2T5 361 aa12.63□□□□□ -0.39
CLDN11-209ENST00000489485 TEX13CA0A0J9YWL9 993 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms