RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 CXXC4Q9H2H0 198 aa11.72□□□□□ -0.53
CCL28-202ENST00000489442 C20orf141Q9NUB4 165 aa11.72□□□□□ -0.53
CCL28-202ENST00000489442 DCAF13Q9NV06 445 aaKnown RBP11.72□□□□□ -0.53
CCL28-202ENST00000489442 CISD1Q9NZ45 108 aaKnown RBP11.72□□□□□ -0.53
CCL28-202ENST00000489442 MAGEL2Q9UJ55 1249 aa11.72□□□□□ -0.53
CCL28-202ENST00000489442 HTR3EA5X5Y0 456 aa11.71□□□□□ -0.53
CCL28-202ENST00000489442 MCIDASD6RGH6 385 aa11.71□□□□□ -0.53
CCL28-202ENST00000489442 ARHGEF9O43307 516 aa11.71□□□□□ -0.53
CCL28-202ENST00000489442 IGF2P01344 180 aa11.71□□□□□ -0.53
CCL28-202ENST00000489442 F13BP05160 661 aa11.71□□□□□ -0.53
CCL28-202ENST00000489442 SAGP10523 405 aaPredicted RBP11.71□□□□□ -0.53
CCL28-202ENST00000489442 HOXB1P14653 301 aaPredicted RBP11.71□□□□□ -0.53
CCL28-202ENST00000489442 PAX7P23759 505 aa11.71□□□□□ -0.53
CCL28-202ENST00000489442 MSX2P35548 267 aaPredicted RBP11.71□□□□□ -0.53
CCL28-202ENST00000489442 CAPZA2P47755 286 aa11.71□□□□□ -0.53
CCL28-202ENST00000489442 CSNK1A1P48729 337 aa11.71□□□□□ -0.53
CCL28-202ENST00000489442 CDH11P55287 796 aa11.71□□□□□ -0.53
CCL28-202ENST00000489442 NKX6-1P78426 367 aaPredicted RBP11.71□□□□□ -0.53
CCL28-202ENST00000489442 RPL18Q07020 188 aaKnown RBP11.71□□□□□ -0.53
CCL28-202ENST00000489442 ZNF730Q6ZMV8 503 aa11.71□□□□□ -0.53
CCL28-202ENST00000489442 SLC46A3Q7Z3Q1 461 aa11.71□□□□□ -0.53
CCL28-202ENST00000489442 RBM15BQ8NDT2 890 aaKnown RBP11.71□□□□□ -0.53
CCL28-202ENST00000489442 OR6X1Q8NH79 312 aa11.71□□□□□ -0.53
CCL28-202ENST00000489442 LILRB1Q8NHL6 650 aaPredicted RBP11.71□□□□□ -0.53
CCL28-202ENST00000489442 SMAP2Q8WU79 429 aaPredicted RBP11.71□□□□□ -0.53
CCL28-202ENST00000489442 NEUROG1Q92886 237 aa11.71□□□□□ -0.53
CCL28-202ENST00000489442 ZNF566Q969W8 418 aa11.71□□□□□ -0.53
CCL28-202ENST00000489442 NSMCE2Q96MF7 247 aa11.71□□□□□ -0.53
CCL28-202ENST00000489442 CXorf56Q9H5V9 222 aa11.71□□□□□ -0.53
CCL28-202ENST00000489442 GORASP2Q9H8Y8 452 aa11.71□□□□□ -0.53
CCL28-202ENST00000489442 INIPQ9NRY2 104 aa11.71□□□□□ -0.53
CCL28-202ENST00000489442 FAIMQ9NVQ4 179 aa11.71□□□□□ -0.53
CCL28-202ENST00000489442 LAMP3Q9UQV4 416 aa11.71□□□□□ -0.53
CCL28-202ENST00000489442 POFUT2Q9Y2G5 429 aa11.71□□□□□ -0.53
CCL28-202ENST00000489442 ENPP4Q9Y6X5 453 aa11.71□□□□□ -0.53
CCL28-202ENST00000489442 V9GYQ6 96 aa11.71□□□□□ -0.53
CCL28-202ENST00000489442 VPS13CQ709C8 3753 aa11.71□□□□□ -0.53
CCL28-202ENST00000489442 MTORP42345 2549 aa11.71□□□□□ -0.54
CCL28-202ENST00000489442 ZNF99A8MXY4 864 aaPredicted RBP11.7□□□□□ -0.54
CCL28-202ENST00000489442 FFAR1O14842 300 aa11.7□□□□□ -0.54
CCL28-202ENST00000489442 PIP5K1CO60331 668 aa11.7□□□□□ -0.54
CCL28-202ENST00000489442 AQP2P41181 271 aa11.7□□□□□ -0.54
CCL28-202ENST00000489442 MELKQ14680 651 aa11.7□□□□□ -0.54
CCL28-202ENST00000489442 SPATS1Q496A3 300 aa11.7□□□□□ -0.54
CCL28-202ENST00000489442 PHYHD1Q5SRE7 291 aa11.7□□□□□ -0.54
CCL28-202ENST00000489442 NHLRC1Q6VVB1 395 aa11.7□□□□□ -0.54
CCL28-202ENST00000489442 HDDC2Q7Z4H3 204 aa11.7□□□□□ -0.54
CCL28-202ENST00000489442 NRMQ8IXM6 262 aa11.7□□□□□ -0.54
CCL28-202ENST00000489442 RNF113BQ8IZP6 322 aaKnown RBP11.7□□□□□ -0.54
CCL28-202ENST00000489442 MAGEE2Q8TD90 523 aaPredicted RBP11.7□□□□□ -0.54
CCL28-202ENST00000489442 ACOT11Q8WXI4 607 aaPredicted RBP11.7□□□□□ -0.54
CCL28-202ENST00000489442 GTPBP3Q969Y2 492 aaKnown RBP11.7□□□□□ -0.54
CCL28-202ENST00000489442 MCUR1Q96AQ8 359 aa11.7□□□□□ -0.54
CCL28-202ENST00000489442 ZNF837Q96EG3 531 aaPredicted RBP11.7□□□□□ -0.54
CCL28-202ENST00000489442 PERPQ96FX8 193 aa11.7□□□□□ -0.54
CCL28-202ENST00000489442 SLC25A44Q96H78 314 aaPredicted RBP11.7□□□□□ -0.54
CCL28-202ENST00000489442 BOD1Q96IK1 185 aa11.7□□□□□ -0.54
CCL28-202ENST00000489442 NMNAT1Q9HAN9 279 aaPredicted RBP11.7□□□□□ -0.54
CCL28-202ENST00000489442 MOV10Q9HCE1 1003 aaKnown RBP11.7□□□□□ -0.54
CCL28-202ENST00000489442 CD300AQ9UGN4 299 aa11.7□□□□□ -0.54
CCL28-202ENST00000489442 ATP23Q9Y6H3 246 aa11.7□□□□□ -0.54
CCL28-202ENST00000489442 ARPC4-TTLL3A0A0A6YYG9 625 aa11.69□□□□□ -0.54
CCL28-202ENST00000489442 SHISA9B4DS77 424 aa11.69□□□□□ -0.54
CCL28-202ENST00000489442 hCG_2039718K7EN88 272 aa11.69□□□□□ -0.54
CCL28-202ENST00000489442 ARPC2O15144 300 aa11.69□□□□□ -0.54
CCL28-202ENST00000489442 SEC14L2O76054 403 aa11.69□□□□□ -0.54
CCL28-202ENST00000489442 IGHG1P01857 330 aa11.69□□□□□ -0.54
CCL28-202ENST00000489442 H1F0P07305 194 aaKnown RBP11.69□□□□□ -0.54
CCL28-202ENST00000489442 ITGA2P17301 1181 aa11.69□□□□□ -0.54
CCL28-202ENST00000489442 RHCEP18577 417 aa11.69□□□□□ -0.54
CCL28-202ENST00000489442 CALB2P22676 271 aa11.69□□□□□ -0.54
CCL28-202ENST00000489442 DAP3P51398 398 aaKnown RBP11.69□□□□□ -0.54
CCL28-202ENST00000489442 CLRN1P58418 232 aa11.69□□□□□ -0.54
CCL28-202ENST00000489442 RPS4XP62701 263 aaKnown RBP11.69□□□□□ -0.54
CCL28-202ENST00000489442 TUBA1BP68363 451 aa11.69□□□□□ -0.54
CCL28-202ENST00000489442 TUBA4AP68366 448 aa11.69□□□□□ -0.54
CCL28-202ENST00000489442 LAPTM4AQ15012 233 aa11.69□□□□□ -0.54
CCL28-202ENST00000489442 FGD3Q5JSP0 725 aa11.69□□□□□ -0.54
CCL28-202ENST00000489442 ZNF813Q6ZN06 617 aa11.69□□□□□ -0.54
CCL28-202ENST00000489442 TUBA1AQ71U36 451 aa11.69□□□□□ -0.54
CCL28-202ENST00000489442 OAFQ86UD1 273 aa11.69□□□□□ -0.54
CCL28-202ENST00000489442 TGIF2LYQ8IUE0 185 aa11.69□□□□□ -0.54
CCL28-202ENST00000489442 CCDC36Q8IYA8 594 aa11.69□□□□□ -0.54
CCL28-202ENST00000489442 BCAS4Q8TDM0 211 aa11.69□□□□□ -0.54
CCL28-202ENST00000489442 LIPHQ8WWY8 451 aa11.69□□□□□ -0.54
CCL28-202ENST00000489442 PYURFQ96I23 114 aa11.69□□□□□ -0.54
CCL28-202ENST00000489442 SLC38A2Q96QD8 506 aa11.69□□□□□ -0.54
CCL28-202ENST00000489442 MAN2C1Q9NTJ4 1040 aa11.69□□□□□ -0.54
CCL28-202ENST00000489442 FAM53CQ9NYF3 392 aa11.69□□□□□ -0.54
CCL28-202ENST00000489442 GLTPQ9NZD2 209 aa11.69□□□□□ -0.54
CCL28-202ENST00000489442 EFCAB9A8MZ26 197 aa11.68□□□□□ -0.54
CCL28-202ENST00000489442 TMCC2O75069 709 aa11.68□□□□□ -0.54
CCL28-202ENST00000489442 CRYAAP02489 173 aa11.68□□□□□ -0.54
CCL28-202ENST00000489442 ADAM8P78325 824 aa11.68□□□□□ -0.54
CCL28-202ENST00000489442 PRKCDQ05655 676 aa11.68□□□□□ -0.54
CCL28-202ENST00000489442 SPOCK1Q08629 439 aa11.68□□□□□ -0.54
CCL28-202ENST00000489442 ALG10Q5BKT4 473 aa11.68□□□□□ -0.54
CCL28-202ENST00000489442 SHEQ5VZ18 495 aa11.68□□□□□ -0.54
CCL28-202ENST00000489442 TBPL2Q6SJ96 375 aa11.68□□□□□ -0.54
CCL28-202ENST00000489442 MBOAT2Q6ZWT7 520 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms