RNA–Protein interactions for RNA: ENST00000489430.1

MRPL55-230, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-230ENST00000489430 RNF13O43567 381 aa16.56■□□□□ 0.24
MRPL55-230ENST00000489430 IFNW1P05000 195 aa16.56■□□□□ 0.24
MRPL55-230ENST00000489430 IFNGR1P15260 489 aa16.56■□□□□ 0.24
MRPL55-230ENST00000489430 TNFRSF1BP20333 461 aa16.56■□□□□ 0.24
MRPL55-230ENST00000489430 PTNP21246 168 aa16.56■□□□□ 0.24
MRPL55-230ENST00000489430 FABP6P51161 128 aa16.56■□□□□ 0.24
MRPL55-230ENST00000489430 C11orf71Q6IPW1 123 aa16.56■□□□□ 0.24
MRPL55-230ENST00000489430 SLC35D2Q76EJ3 337 aa16.56■□□□□ 0.24
MRPL55-230ENST00000489430 SLC46A3Q7Z3Q1 461 aa16.56■□□□□ 0.24
MRPL55-230ENST00000489430 HDDC2Q7Z4H3 204 aa16.56■□□□□ 0.24
MRPL55-230ENST00000489430 NANOGNBQ7Z5D8 188 aa16.56■□□□□ 0.24
MRPL55-230ENST00000489430 NKAIN4Q8IVV8 208 aa16.56■□□□□ 0.24
MRPL55-230ENST00000489430 GEMIN6Q8WXD5 167 aaKnown RBP16.56■□□□□ 0.24
MRPL55-230ENST00000489430 ZNF837Q96EG3 531 aaPredicted RBP16.56■□□□□ 0.24
MRPL55-230ENST00000489430 ULBP2Q9BZM5 246 aa16.56■□□□□ 0.24
MRPL55-230ENST00000489430 STX18Q9P2W9 335 aaKnown RBP16.56■□□□□ 0.24
MRPL55-230ENST00000489430 SETD2Q9BYW2 2564 aaPredicted RBP16.55■□□□□ 0.24
MRPL55-230ENST00000489430 NPIPB13A6NJU9 1138 aa16.55■□□□□ 0.24
MRPL55-230ENST00000489430 NPIPB4C9JG80 1138 aa16.55■□□□□ 0.24
MRPL55-230ENST00000489430 C11orf98E9PRG8 122 aa16.55■□□□□ 0.24
MRPL55-230ENST00000489430 GSTA4O15217 222 aa16.55■□□□□ 0.24
MRPL55-230ENST00000489430 PDE5AO76074 875 aa16.55■□□□□ 0.24
MRPL55-230ENST00000489430 OR7A10O76100 309 aa16.55■□□□□ 0.24
MRPL55-230ENST00000489430 TSPAN19P0C672 248 aa16.55■□□□□ 0.24
MRPL55-230ENST00000489430 UMPSP11172 480 aa16.55■□□□□ 0.24
MRPL55-230ENST00000489430 FUT1P19526 365 aa16.55■□□□□ 0.24
MRPL55-230ENST00000489430 CSNK1A1P48729 337 aa16.55■□□□□ 0.24
MRPL55-230ENST00000489430 GSK3BP49841 420 aa16.55■□□□□ 0.24
MRPL55-230ENST00000489430 BIDP55957 195 aa16.55■□□□□ 0.24
MRPL55-230ENST00000489430 NAAAQ02083 359 aa16.55■□□□□ 0.24
MRPL55-230ENST00000489430 CHRNB3Q05901 458 aa16.55■□□□□ 0.24
MRPL55-230ENST00000489430 CAMK2DQ13557 499 aa16.55■□□□□ 0.24
MRPL55-230ENST00000489430 B3GLCTQ6Y288 498 aa16.55■□□□□ 0.24
MRPL55-230ENST00000489430 CBLL1Q75N03 491 aa16.55■□□□□ 0.24
MRPL55-230ENST00000489430 LRRC17Q8N6Y2 441 aa16.55■□□□□ 0.24
MRPL55-230ENST00000489430 OR4F15Q8NGB8 312 aa16.55■□□□□ 0.24
MRPL55-230ENST00000489430 TMEM255BQ8WV15 326 aa16.55■□□□□ 0.24
MRPL55-230ENST00000489430 TMEM54Q969K7 222 aa16.55■□□□□ 0.24
MRPL55-230ENST00000489430 ZNF566Q969W8 418 aa16.55■□□□□ 0.24
MRPL55-230ENST00000489430 SGTBQ96EQ0 304 aa16.55■□□□□ 0.24
MRPL55-230ENST00000489430 SPAG4Q9NPE6 437 aa16.55■□□□□ 0.24
MRPL55-230ENST00000489430 FBXO9Q9UK97 447 aaPredicted RBP16.55■□□□□ 0.24
MRPL55-230ENST00000489430 A4GNTQ9UNA3 340 aa16.55■□□□□ 0.24
MRPL55-230ENST00000489430 MOKQ9UQ07 419 aa16.55■□□□□ 0.24
MRPL55-230ENST00000489430 POFUT2Q9Y2G5 429 aa16.55■□□□□ 0.24
MRPL55-230ENST00000489430 ATP23Q9Y6H3 246 aa16.55■□□□□ 0.24
MRPL55-230ENST00000489430 USF3Q68DE3 2245 aa16.55■□□□□ 0.24
MRPL55-230ENST00000489430 C2CD3Q4AC94 2353 aa16.54■□□□□ 0.24
MRPL55-230ENST00000489430 ATP6V1G2-DDX39BF2Z307 99 aa16.54■□□□□ 0.24
MRPL55-230ENST00000489430 H7C1Q1 480 aa16.54■□□□□ 0.24
MRPL55-230ENST00000489430 H7C417 338 aa16.54■□□□□ 0.24
MRPL55-230ENST00000489430 BCL10O95999 233 aa16.54■□□□□ 0.24
MRPL55-230ENST00000489430 CECR9P0C854 216 aa16.54■□□□□ 0.24
MRPL55-230ENST00000489430 CDKN1AP38936 164 aa16.54■□□□□ 0.24
MRPL55-230ENST00000489430 UGT2B15P54855 530 aa16.54■□□□□ 0.24
MRPL55-230ENST00000489430 PSME3P61289 254 aa16.54■□□□□ 0.24
MRPL55-230ENST00000489430 ANKDD1AQ495B1 522 aa16.54■□□□□ 0.24
MRPL55-230ENST00000489430 NRN1LQ496H8 165 aa16.54■□□□□ 0.24
MRPL55-230ENST00000489430 IFI44LQ53G44 452 aa16.54■□□□□ 0.24
MRPL55-230ENST00000489430 PHYHD1Q5SRE7 291 aa16.54■□□□□ 0.24
MRPL55-230ENST00000489430 CARD17Q5XLA6 110 aa16.54■□□□□ 0.24
MRPL55-230ENST00000489430 PIWIL3Q7Z3Z3 882 aaKnown RBP16.54■□□□□ 0.24
MRPL55-230ENST00000489430 OFCC1Q8IZS5 231 aa16.54■□□□□ 0.24
MRPL55-230ENST00000489430 NANOS1Q8WY41 292 aaKnown RBP16.54■□□□□ 0.24
MRPL55-230ENST00000489430 KCTD14Q9BQ13 255 aaPredicted RBP16.54■□□□□ 0.24
MRPL55-230ENST00000489430 FAM107BQ9H098 131 aa16.54■□□□□ 0.24
MRPL55-230ENST00000489430 B3GNT2Q9NY97 397 aa16.54■□□□□ 0.24
MRPL55-230ENST00000489430 GLTPQ9NZD2 209 aa16.54■□□□□ 0.24
MRPL55-230ENST00000489430 FBXL3Q9UKT7 428 aa16.54■□□□□ 0.24
MRPL55-230ENST00000489430 NF1P21359 2839 aa16.54■□□□□ 0.24
MRPL55-230ENST00000489430 A0A1W2PRG6 482 aa16.53■□□□□ 0.24
MRPL55-230ENST00000489430 BLOC1S5-TXNDC5H3BN57 136 aa16.53■□□□□ 0.24
MRPL55-230ENST00000489430 MGRN1O60291 552 aa16.53■□□□□ 0.24
MRPL55-230ENST00000489430 SHOX2O60902 331 aaPredicted RBP16.53■□□□□ 0.24
MRPL55-230ENST00000489430 IGHV4-39P01824 125 aa16.53■□□□□ 0.24
MRPL55-230ENST00000489430 IGHG1P01857 330 aa16.53■□□□□ 0.24
MRPL55-230ENST00000489430 DAP3P51398 398 aaKnown RBP16.53■□□□□ 0.24
MRPL55-230ENST00000489430 RPL18Q07020 188 aaKnown RBP16.53■□□□□ 0.24
MRPL55-230ENST00000489430 TRAM2Q15035 370 aa16.53■□□□□ 0.24
MRPL55-230ENST00000489430 CLEC12BQ2HXU8 276 aa16.53■□□□□ 0.24
MRPL55-230ENST00000489430 ZNF813Q6ZN06 617 aa16.53■□□□□ 0.24
MRPL55-230ENST00000489430 DNM1P46Q6ZS02 220 aa16.53■□□□□ 0.24
MRPL55-230ENST00000489430 RNF113BQ8IZP6 322 aaKnown RBP16.53■□□□□ 0.24
MRPL55-230ENST00000489430 NUP37Q8NFH4 326 aa16.53■□□□□ 0.24
MRPL55-230ENST00000489430 PFN4Q8NHR9 129 aa16.53■□□□□ 0.24
MRPL55-230ENST00000489430 SEPHS2Q99611 448 aa16.53■□□□□ 0.24
MRPL55-230ENST00000489430 FOXB1Q99853 325 aa16.53■□□□□ 0.24
MRPL55-230ENST00000489430 FNDC11Q9BVV2 318 aa16.53■□□□□ 0.24
MRPL55-230ENST00000489430 CACNG6Q9BXT2 260 aa16.53■□□□□ 0.24
MRPL55-230ENST00000489430 ANKRD19PQ9H560 264 aa16.53■□□□□ 0.24
MRPL55-230ENST00000489430 RPS6KA6Q9UK32 745 aa16.53■□□□□ 0.24
MRPL55-230ENST00000489430 TRIM64A6NGJ6 449 aa16.52■□□□□ 0.24
MRPL55-230ENST00000489430 TRIM64BA6NI03 449 aa16.52■□□□□ 0.24
MRPL55-230ENST00000489430 VSTM5A8MXK1 200 aa16.52■□□□□ 0.24
MRPL55-230ENST00000489430 SERPINI2O75830 405 aa16.52■□□□□ 0.24
MRPL55-230ENST00000489430 ZNF682O95780 498 aa16.52■□□□□ 0.24
MRPL55-230ENST00000489430 HEXAP06865 529 aa16.52■□□□□ 0.24
MRPL55-230ENST00000489430 PGA4P0DJD7 388 aa16.52■□□□□ 0.24
MRPL55-230ENST00000489430 PGA3P0DJD8 388 aa16.52■□□□□ 0.24
MRPL55-230ENST00000489430 DSCR9P59020 149 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms