RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 UGT2B15P54855 530 aa21.74■■□□□ 1.07
HMGN1-217ENST00000489072 BIDP55957 195 aa21.74■■□□□ 1.07
HMGN1-217ENST00000489072 C3orf36Q3SXR2 165 aa21.74■■□□□ 1.07
HMGN1-217ENST00000489072 C8orf82Q6P1X6 216 aaPredicted RBP21.74■■□□□ 1.07
HMGN1-217ENST00000489072 DNM1P46Q6ZS02 220 aa21.74■■□□□ 1.07
HMGN1-217ENST00000489072 SPATA21Q7Z572 469 aa21.74■■□□□ 1.07
HMGN1-217ENST00000489072 ARPINQ7Z6K5 226 aa21.74■■□□□ 1.07
HMGN1-217ENST00000489072 FAM169BQ8N8A8 192 aa21.74■■□□□ 1.07
HMGN1-217ENST00000489072 PFN4Q8NHR9 129 aa21.74■■□□□ 1.07
HMGN1-217ENST00000489072 TMEM255BQ8WV15 326 aa21.74■■□□□ 1.07
HMGN1-217ENST00000489072 HS6ST2Q96MM7 605 aa21.74■■□□□ 1.07
HMGN1-217ENST00000489072 KATNB1Q9BVA0 655 aa21.74■■□□□ 1.07
HMGN1-217ENST00000489072 POLR2J2Q9GZM3 115 aaKnown RBP21.74■■□□□ 1.07
HMGN1-217ENST00000489072 POLR2J3Q9H1A7 115 aaKnown RBP21.74■■□□□ 1.07
HMGN1-217ENST00000489072 HIVEP2P31629 2446 aa21.74■■□□□ 1.07
HMGN1-217ENST00000489072 FAM171A2A8MVW0 826 aa21.73■■□□□ 1.07
HMGN1-217ENST00000489072 NME4O00746 187 aa21.73■■□□□ 1.07
HMGN1-217ENST00000489072 IGKV3-15P01624 115 aa21.73■■□□□ 1.07
HMGN1-217ENST00000489072 APOBEC3AP31941 199 aaPredicted RBP21.73■■□□□ 1.07
HMGN1-217ENST00000489072 NAAAQ02083 359 aa21.73■■□□□ 1.07
HMGN1-217ENST00000489072 LIPEQ05469 1076 aa21.73■■□□□ 1.07
HMGN1-217ENST00000489072 SLC35D2Q76EJ3 337 aa21.73■■□□□ 1.07
HMGN1-217ENST00000489072 OR6N1Q8NGY5 312 aa21.73■■□□□ 1.07
HMGN1-217ENST00000489072 TPD52L3Q96J77 140 aa21.73■■□□□ 1.07
HMGN1-217ENST00000489072 B3GAT2Q9NPZ5 323 aa21.73■■□□□ 1.07
HMGN1-217ENST00000489072 AP3M1Q9Y2T2 418 aa21.73■■□□□ 1.07
HMGN1-217ENST00000489072 RNF13O43567 381 aa21.72■■□□□ 1.07
HMGN1-217ENST00000489072 MT-ND1P03886 318 aa21.72■■□□□ 1.07
HMGN1-217ENST00000489072 UMPSP11172 480 aa21.72■■□□□ 1.07
HMGN1-217ENST00000489072 CBR1P16152 277 aa21.72■■□□□ 1.07
HMGN1-217ENST00000489072 CALCRP30988 508 aa21.72■■□□□ 1.07
HMGN1-217ENST00000489072 RBM34P42696 430 aaKnown RBP21.72■■□□□ 1.07
HMGN1-217ENST00000489072 SLC7A2P52569 658 aa21.72■■□□□ 1.07
HMGN1-217ENST00000489072 SELENOWP63302 87 aa21.72■■□□□ 1.07
HMGN1-217ENST00000489072 OR6X1Q8NH79 312 aa21.72■■□□□ 1.07
HMGN1-217ENST00000489072 HTRA1Q92743 480 aa21.72■■□□□ 1.07
HMGN1-217ENST00000489072 ULBP2Q9BZM5 246 aa21.72■■□□□ 1.07
HMGN1-217ENST00000489072 MYLK2Q9H1R3 596 aa21.72■■□□□ 1.07
HMGN1-217ENST00000489072 BARX1Q9HBU1 254 aaPredicted RBP21.72■■□□□ 1.07
HMGN1-217ENST00000489072 C20orf141Q9NUB4 165 aa21.72■■□□□ 1.07
HMGN1-217ENST00000489072 RNF223E7ERA6 249 aa21.71■■□□□ 1.07
HMGN1-217ENST00000489072 CRYAAP02489 173 aa21.71■■□□□ 1.07
HMGN1-217ENST00000489072 HIST1H2ABP04908 130 aa21.71■■□□□ 1.07
HMGN1-217ENST00000489072 CSNK1A1P48729 337 aa21.71■■□□□ 1.07
HMGN1-217ENST00000489072 IDH3GP51553 393 aaPredicted RBP21.71■■□□□ 1.07
HMGN1-217ENST00000489072 MELKQ14680 651 aa21.71■■□□□ 1.07
HMGN1-217ENST00000489072 MST1LQ2TV78 715 aa21.71■■□□□ 1.07
HMGN1-217ENST00000489072 HIST3H2AQ7L7L0 130 aa21.71■■□□□ 1.07
HMGN1-217ENST00000489072 ZNF627Q7L945 461 aa21.71■■□□□ 1.07
HMGN1-217ENST00000489072 NANOGNBQ7Z5D8 188 aa21.71■■□□□ 1.07
HMGN1-217ENST00000489072 MDP1Q86V88 176 aa21.71■■□□□ 1.07
HMGN1-217ENST00000489072 TMEM239Q8WW34 195 aa21.71■■□□□ 1.07
HMGN1-217ENST00000489072 HIST1H2ACQ93077 130 aa21.71■■□□□ 1.07
HMGN1-217ENST00000489072 TMEM54Q969K7 222 aa21.71■■□□□ 1.07
HMGN1-217ENST00000489072 ADAD1Q96M93 576 aaKnown RBP21.71■■□□□ 1.07
HMGN1-217ENST00000489072 HOPXQ9BPY8 73 aaPredicted RBP21.71■■□□□ 1.07
HMGN1-217ENST00000489072 KCNS3Q9BQ31 491 aa21.71■■□□□ 1.07
HMGN1-217ENST00000489072 EFCAB1Q9HAE3 211 aa21.71■■□□□ 1.07
HMGN1-217ENST00000489072 NOX3Q9HBY0 568 aa21.71■■□□□ 1.07
HMGN1-217ENST00000489072 MOV10Q9HCE1 1003 aaKnown RBP21.71■■□□□ 1.07
HMGN1-217ENST00000489072 ABCA1O95477 2261 aa21.71■■□□□ 1.07
HMGN1-217ENST00000489072 SSX4O60224 188 aa21.7■■□□□ 1.06
HMGN1-217ENST00000489072 OR7A10O76100 309 aa21.7■■□□□ 1.06
HMGN1-217ENST00000489072 FUT4P22083 530 aa21.7■■□□□ 1.06
HMGN1-217ENST00000489072 CAPZA2P47755 286 aa21.7■■□□□ 1.06
HMGN1-217ENST00000489072 HACD2Q6Y1H2 254 aa21.7■■□□□ 1.06
HMGN1-217ENST00000489072 ZNF813Q6ZN06 617 aa21.7■■□□□ 1.06
HMGN1-217ENST00000489072 VTCN1Q7Z7D3 282 aa21.7■■□□□ 1.06
HMGN1-217ENST00000489072 MAPK1IP1LQ8NDC0 245 aa21.7■■□□□ 1.06
HMGN1-217ENST00000489072 SGTBQ96EQ0 304 aa21.7■■□□□ 1.06
HMGN1-217ENST00000489072 FAM107BQ9H098 131 aa21.7■■□□□ 1.06
HMGN1-217ENST00000489072 B3GNT2Q9NY97 397 aa21.7■■□□□ 1.06
HMGN1-217ENST00000489072 A4GNTQ9UNA3 340 aa21.7■■□□□ 1.06
HMGN1-217ENST00000489072 POFUT2Q9Y2G5 429 aa21.7■■□□□ 1.06
HMGN1-217ENST00000489072 SONP18583 2426 aaKnown RBP21.7■■□□□ 1.06
HMGN1-217ENST00000489072 BLOC1S5-TXNDC5H3BN57 136 aa21.69■■□□□ 1.06
HMGN1-217ENST00000489072 H7C417 338 aa21.69■■□□□ 1.06
HMGN1-217ENST00000489072 CXCR6O00574 342 aa21.69■■□□□ 1.06
HMGN1-217ENST00000489072 IGF2P01344 180 aa21.69■■□□□ 1.06
HMGN1-217ENST00000489072 HLA-HP01893 362 aa21.69■■□□□ 1.06
HMGN1-217ENST00000489072 THRBP10828 461 aa21.69■■□□□ 1.06
HMGN1-217ENST00000489072 B4GALT1P15291 398 aa21.69■■□□□ 1.06
HMGN1-217ENST00000489072 FUT1P19526 365 aa21.69■■□□□ 1.06
HMGN1-217ENST00000489072 DRD4P21917 467 aa21.69■■□□□ 1.06
HMGN1-217ENST00000489072 ARR3P36575 388 aa21.69■■□□□ 1.06
HMGN1-217ENST00000489072 GSK3BP49841 420 aa21.69■■□□□ 1.06
HMGN1-217ENST00000489072 NUDT2P50583 147 aa21.69■■□□□ 1.06
HMGN1-217ENST00000489072 HGFACQ04756 655 aa21.69■■□□□ 1.06
HMGN1-217ENST00000489072 RPL18Q07020 188 aaKnown RBP21.69■■□□□ 1.06
HMGN1-217ENST00000489072 NPRL3Q12980 569 aa21.69■■□□□ 1.06
HMGN1-217ENST00000489072 SWI5Q1ZZU3 235 aa21.69■■□□□ 1.06
HMGN1-217ENST00000489072 CCDC36Q8IYA8 594 aa21.69■■□□□ 1.06
HMGN1-217ENST00000489072 FBXO17Q96EF6 278 aa21.69■■□□□ 1.06
HMGN1-217ENST00000489072 PRRC1Q96M27 445 aa21.69■■□□□ 1.06
HMGN1-217ENST00000489072 FOXB1Q99853 325 aa21.69■■□□□ 1.06
HMGN1-217ENST00000489072 REG4Q9BYZ8 158 aa21.69■■□□□ 1.06
HMGN1-217ENST00000489072 CA10Q9NS85 328 aa21.69■■□□□ 1.06
HMGN1-217ENST00000489072 GLTPQ9NZD2 209 aa21.69■■□□□ 1.06
HMGN1-217ENST00000489072 ZNF224Q9NZL3 707 aa21.69■■□□□ 1.06
HMGN1-217ENST00000489072 SNX13Q9Y5W8 968 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms