RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 CH25HO95992 272 aa19.96■□□□□ 0.79
COL9A3-213ENST00000489045 OR4A8P0C604 315 aa19.96■□□□□ 0.79
COL9A3-213ENST00000489045 ARR3P36575 388 aa19.96■□□□□ 0.79
COL9A3-213ENST00000489045 MAPRE2Q15555 327 aa19.96■□□□□ 0.79
COL9A3-213ENST00000489045 ADIPOQQ15848 244 aa19.96■□□□□ 0.79
COL9A3-213ENST00000489045 CCDC36Q8IYA8 594 aa19.96■□□□□ 0.79
COL9A3-213ENST00000489045 OR6N1Q8NGY5 312 aa19.96■□□□□ 0.79
COL9A3-213ENST00000489045 MPP4Q96JB8 637 aa19.96■□□□□ 0.79
COL9A3-213ENST00000489045 SORCS2Q96PQ0 1159 aa19.96■□□□□ 0.79
COL9A3-213ENST00000489045 ZNF426Q9BUY5 554 aa19.96■□□□□ 0.79
COL9A3-213ENST00000489045 ZNF446Q9NWS9 450 aa19.96■□□□□ 0.79
COL9A3-213ENST00000489045 ANK3Q12955 4377 aaKnown RBP19.96■□□□□ 0.79
COL9A3-213ENST00000489045 IGHV2OR16-5A0A0B4J2B6 119 aa19.95■□□□□ 0.78
COL9A3-213ENST00000489045 BBIP1A8MTZ0 92 aa19.95■□□□□ 0.78
COL9A3-213ENST00000489045 PDE5AO76074 875 aa19.95■□□□□ 0.78
COL9A3-213ENST00000489045 F12P00748 615 aaPredicted RBP19.95■□□□□ 0.78
COL9A3-213ENST00000489045 VIMP08670 466 aaKnown RBP19.95■□□□□ 0.78
COL9A3-213ENST00000489045 IFNGR1P15260 489 aa19.95■□□□□ 0.78
COL9A3-213ENST00000489045 SLC25A16P16260 332 aa19.95■□□□□ 0.78
COL9A3-213ENST00000489045 BIDP55957 195 aa19.95■□□□□ 0.78
COL9A3-213ENST00000489045 HGFACQ04756 655 aa19.95■□□□□ 0.78
COL9A3-213ENST00000489045 ZNF813Q6ZN06 617 aa19.95■□□□□ 0.78
COL9A3-213ENST00000489045 SNX32Q86XE0 403 aa19.95■□□□□ 0.78
COL9A3-213ENST00000489045 NUP37Q8NFH4 326 aa19.95■□□□□ 0.78
COL9A3-213ENST00000489045 C10orf105Q8TEF2 133 aa19.95■□□□□ 0.78
COL9A3-213ENST00000489045 NANOS1Q8WY41 292 aaKnown RBP19.95■□□□□ 0.78
COL9A3-213ENST00000489045 PROX1Q92786 737 aa19.95■□□□□ 0.78
COL9A3-213ENST00000489045 NANSQ9NR45 359 aa19.95■□□□□ 0.78
COL9A3-213ENST00000489045 YAE1D1Q9NRH1 226 aa19.95■□□□□ 0.78
COL9A3-213ENST00000489045 ADAM21Q9UKJ8 722 aa19.95■□□□□ 0.78
COL9A3-213ENST00000489045 POFUT2Q9Y2G5 429 aa19.95■□□□□ 0.78
COL9A3-213ENST00000489045 SH3GLB1Q9Y371 365 aa19.95■□□□□ 0.78
COL9A3-213ENST00000489045 KIAA1324LA8MWY0 1029 aaPredicted RBP19.94■□□□□ 0.78
COL9A3-213ENST00000489045 B9A039 149 aa19.94■□□□□ 0.78
COL9A3-213ENST00000489045 TLX2O43763 284 aaPredicted RBP19.94■□□□□ 0.78
COL9A3-213ENST00000489045 NPPAP01160 153 aa19.94■□□□□ 0.78
COL9A3-213ENST00000489045 HLA-HP01893 362 aa19.94■□□□□ 0.78
COL9A3-213ENST00000489045 CSF3P09919 207 aa19.94■□□□□ 0.78
COL9A3-213ENST00000489045 TNFRSF1BP20333 461 aa19.94■□□□□ 0.78
COL9A3-213ENST00000489045 CSNK1A1P48729 337 aa19.94■□□□□ 0.78
COL9A3-213ENST00000489045 ZNF627Q7L945 461 aa19.94■□□□□ 0.78
COL9A3-213ENST00000489045 SLC46A3Q7Z3Q1 461 aa19.94■□□□□ 0.78
COL9A3-213ENST00000489045 CARM1Q86X55 608 aa19.94■□□□□ 0.78
COL9A3-213ENST00000489045 LRRC17Q8N6Y2 441 aa19.94■□□□□ 0.78
COL9A3-213ENST00000489045 PRSS27Q9BQR3 290 aa19.94■□□□□ 0.78
COL9A3-213ENST00000489045 SLC19A3Q9BZV2 496 aa19.94■□□□□ 0.78
COL9A3-213ENST00000489045 NOX3Q9HBY0 568 aa19.94■□□□□ 0.78
COL9A3-213ENST00000489045 B3GNT2Q9NY97 397 aa19.94■□□□□ 0.78
COL9A3-213ENST00000489045 TAS2R5Q9NYW4 299 aa19.94■□□□□ 0.78
COL9A3-213ENST00000489045 ZNF229Q9UJW7 825 aa19.94■□□□□ 0.78
COL9A3-213ENST00000489045 FKBP7Q9Y680 259 aa19.94■□□□□ 0.78
COL9A3-213ENST00000489045 LOC100653049A0A140TA62 436 aa19.93■□□□□ 0.78
COL9A3-213ENST00000489045 RNF13O43567 381 aa19.93■□□□□ 0.78
COL9A3-213ENST00000489045 KRT34O76011 436 aa19.93■□□□□ 0.78
COL9A3-213ENST00000489045 CD79AP11912 226 aa19.93■□□□□ 0.78
COL9A3-213ENST00000489045 B4GALT1P15291 398 aa19.93■□□□□ 0.78
COL9A3-213ENST00000489045 THBS4P35443 961 aa19.93■□□□□ 0.78
COL9A3-213ENST00000489045 GUCY1A3Q02108 690 aa19.93■□□□□ 0.78
COL9A3-213ENST00000489045 LOXL1Q08397 574 aaPredicted RBP19.93■□□□□ 0.78
COL9A3-213ENST00000489045 ZP4Q12836 540 aa19.93■□□□□ 0.78
COL9A3-213ENST00000489045 EFNB3Q15768 340 aa19.93■□□□□ 0.78
COL9A3-213ENST00000489045 TMEM249Q2WGJ8 235 aa19.93■□□□□ 0.78
COL9A3-213ENST00000489045 ERICH5Q6P6B1 374 aa19.93■□□□□ 0.78
COL9A3-213ENST00000489045 SLC35D2Q76EJ3 337 aa19.93■□□□□ 0.78
COL9A3-213ENST00000489045 ZNF583Q96ND8 569 aa19.93■□□□□ 0.78
COL9A3-213ENST00000489045 TNFRSF13CQ96RJ3 184 aa19.93■□□□□ 0.78
COL9A3-213ENST00000489045 FOXB1Q99853 325 aa19.93■□□□□ 0.78
COL9A3-213ENST00000489045 VRK1Q99986 396 aaPredicted RBP19.93■□□□□ 0.78
COL9A3-213ENST00000489045 PLK3Q9H4B4 646 aa19.93■□□□□ 0.78
COL9A3-213ENST00000489045 ZNF442Q9H7R0 627 aa19.93■□□□□ 0.78
COL9A3-213ENST00000489045 BAG5Q9UL15 447 aa19.93■□□□□ 0.78
COL9A3-213ENST00000489045 SHOX2O60902 331 aaPredicted RBP19.92■□□□□ 0.78
COL9A3-213ENST00000489045 UMPSP11172 480 aa19.92■□□□□ 0.78
COL9A3-213ENST00000489045 PIGFQ07326 219 aa19.92■□□□□ 0.78
COL9A3-213ENST00000489045 MELKQ14680 651 aa19.92■□□□□ 0.78
COL9A3-213ENST00000489045 GSG1Q2KHT4 349 aa19.92■□□□□ 0.78
COL9A3-213ENST00000489045 DEF8Q6ZN54 512 aa19.92■□□□□ 0.78
COL9A3-213ENST00000489045 NANOGNBQ7Z5D8 188 aa19.92■□□□□ 0.78
COL9A3-213ENST00000489045 ANKS4BQ8N8V4 417 aa19.92■□□□□ 0.78
COL9A3-213ENST00000489045 OR6X1Q8NH79 312 aa19.92■□□□□ 0.78
COL9A3-213ENST00000489045 C10orf82Q8WW14 230 aa19.92■□□□□ 0.78
COL9A3-213ENST00000489045 TMEM54Q969K7 222 aa19.92■□□□□ 0.78
COL9A3-213ENST00000489045 MEPEQ9NQ76 525 aaPredicted RBP19.92■□□□□ 0.78
COL9A3-213ENST00000489045 ZNF224Q9NZL3 707 aa19.92■□□□□ 0.78
COL9A3-213ENST00000489045 CAPN7Q9Y6W3 813 aa19.92■□□□□ 0.78
COL9A3-213ENST00000489045 HIST1H2ABP04908 130 aa19.91■□□□□ 0.78
COL9A3-213ENST00000489045 ASAH2BP0C7U1 165 aa19.91■□□□□ 0.78
COL9A3-213ENST00000489045 NPR2P20594 1047 aa19.91■□□□□ 0.78
COL9A3-213ENST00000489045 PPOXP50336 477 aa19.91■□□□□ 0.78
COL9A3-213ENST00000489045 PDLIM4P50479 330 aa19.91■□□□□ 0.78
COL9A3-213ENST00000489045 TAS2R41P59536 307 aa19.91■□□□□ 0.78
COL9A3-213ENST00000489045 HIST3H2AQ7L7L0 130 aa19.91■□□□□ 0.78
COL9A3-213ENST00000489045 PCYOX1LQ8NBM8 494 aa19.91■□□□□ 0.78
COL9A3-213ENST00000489045 IL17RDQ8NFM7 739 aa19.91■□□□□ 0.78
COL9A3-213ENST00000489045 HIST1H2ACQ93077 130 aa19.91■□□□□ 0.78
COL9A3-213ENST00000489045 MS4A3Q96HJ5 214 aa19.91■□□□□ 0.78
COL9A3-213ENST00000489045 GID8Q9NWU2 228 aa19.91■□□□□ 0.78
COL9A3-213ENST00000489045 FAM220BPB1ANY3 271 aa19.9■□□□□ 0.78
COL9A3-213ENST00000489045 hCG_2039718K7EN88 272 aa19.9■□□□□ 0.78
COL9A3-213ENST00000489045 ZNF14P17017 642 aaPredicted RBP19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms