RNA–Protein interactions for RNA: ENST00000488935.5

ERGIC3-217, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-217ENST00000488935 A0A1B0GX12 115 aa13.68□□□□□ -0.22
ERGIC3-217ENST00000488935 PLPP3O14495 311 aa13.68□□□□□ -0.22
ERGIC3-217ENST00000488935 POLR3GO15318 223 aaPredicted RBP13.68□□□□□ -0.22
ERGIC3-217ENST00000488935 FZD7O75084 574 aa13.68□□□□□ -0.22
ERGIC3-217ENST00000488935 CCL2P13500 99 aa13.68□□□□□ -0.22
ERGIC3-217ENST00000488935 ZNF14P17017 642 aaPredicted RBP13.68□□□□□ -0.22
ERGIC3-217ENST00000488935 HNF1AP20823 631 aa13.68□□□□□ -0.22
ERGIC3-217ENST00000488935 SRP14P37108 136 aaKnown RBP13.68□□□□□ -0.22
ERGIC3-217ENST00000488935 CHN2P52757 468 aa13.68□□□□□ -0.22
ERGIC3-217ENST00000488935 BIDP55957 195 aa13.68□□□□□ -0.22
ERGIC3-217ENST00000488935 NCALDP61601 193 aa13.68□□□□□ -0.22
ERGIC3-217ENST00000488935 RIN1Q13671 783 aa13.68□□□□□ -0.22
ERGIC3-217ENST00000488935 MELKQ14680 651 aa13.68□□□□□ -0.22
ERGIC3-217ENST00000488935 GSG1Q2KHT4 349 aa13.68□□□□□ -0.22
ERGIC3-217ENST00000488935 ELFN2Q5R3F8 820 aa13.68□□□□□ -0.22
ERGIC3-217ENST00000488935 LRIF1Q5T3J3 769 aa13.68□□□□□ -0.22
ERGIC3-217ENST00000488935 C1QTNF12Q5T7M4 302 aa13.68□□□□□ -0.22
ERGIC3-217ENST00000488935 ULK3Q6PHR2 472 aa13.68□□□□□ -0.22
ERGIC3-217ENST00000488935 WDR88Q6ZMY6 472 aa13.68□□□□□ -0.22
ERGIC3-217ENST00000488935 CROCCP2Q86T23 111 aa13.68□□□□□ -0.22
ERGIC3-217ENST00000488935 OR4D11Q8NGI4 311 aa13.68□□□□□ -0.22
ERGIC3-217ENST00000488935 DNAJA4Q8WW22 397 aaPredicted RBP13.68□□□□□ -0.22
ERGIC3-217ENST00000488935 SLC41A3Q96GZ6 507 aa13.68□□□□□ -0.22
ERGIC3-217ENST00000488935 ZNF317Q96PQ6 595 aaPredicted RBP13.68□□□□□ -0.22
ERGIC3-217ENST00000488935 ASPNQ9BXN1 380 aa13.68□□□□□ -0.22
ERGIC3-217ENST00000488935 ULBP2Q9BZM5 246 aa13.68□□□□□ -0.22
ERGIC3-217ENST00000488935 C12orf10Q9HB07 376 aa13.68□□□□□ -0.22
ERGIC3-217ENST00000488935 SELENONQ9NZV5 590 aa13.68□□□□□ -0.22
ERGIC3-217ENST00000488935 TMEFF2Q9UIK5 374 aaPredicted RBP13.68□□□□□ -0.22
ERGIC3-217ENST00000488935 TRBV5-3A0A0A0MS03 114 aa13.67□□□□□ -0.22
ERGIC3-217ENST00000488935 CPSF4LA6NMK7 179 aaKnown RBP13.67□□□□□ -0.22
ERGIC3-217ENST00000488935 ZNF726A6NNF4 738 aa13.67□□□□□ -0.22
ERGIC3-217ENST00000488935 VSTM5A8MXK1 200 aa13.67□□□□□ -0.22
ERGIC3-217ENST00000488935 KPNA4O00629 521 aaPredicted RBP13.67□□□□□ -0.22
ERGIC3-217ENST00000488935 THY1P04216 161 aa13.67□□□□□ -0.22
ERGIC3-217ENST00000488935 TACSTD2P09758 323 aa13.67□□□□□ -0.22
ERGIC3-217ENST00000488935 NAT2P11245 290 aa13.67□□□□□ -0.22
ERGIC3-217ENST00000488935 ZNF35P13682 527 aa13.67□□□□□ -0.22
ERGIC3-217ENST00000488935 ITGA2P17301 1181 aa13.67□□□□□ -0.22
ERGIC3-217ENST00000488935 RAB1AP62820 205 aa13.67□□□□□ -0.22
ERGIC3-217ENST00000488935 PUDPQ08623 228 aa13.67□□□□□ -0.22
ERGIC3-217ENST00000488935 NPTX1Q15818 432 aa13.67□□□□□ -0.22
ERGIC3-217ENST00000488935 NET1Q7Z628 596 aaPredicted RBP13.67□□□□□ -0.22
ERGIC3-217ENST00000488935 TSPYL5Q86VY4 417 aaPredicted RBP13.67□□□□□ -0.22
ERGIC3-217ENST00000488935 ARMC8Q8IUR7 673 aa13.67□□□□□ -0.22
ERGIC3-217ENST00000488935 SKA3Q8IX90 412 aa13.67□□□□□ -0.22
ERGIC3-217ENST00000488935 LRRC17Q8N6Y2 441 aa13.67□□□□□ -0.22
ERGIC3-217ENST00000488935 LINC01356Q8N9X3 169 aa13.67□□□□□ -0.22
ERGIC3-217ENST00000488935 ZNF540Q8NDQ6 660 aa13.67□□□□□ -0.22
ERGIC3-217ENST00000488935 ANKK1Q8NFD2 765 aa13.67□□□□□ -0.22
ERGIC3-217ENST00000488935 VANGL1Q8TAA9 524 aaPredicted RBP13.67□□□□□ -0.22
ERGIC3-217ENST00000488935 YIPF5Q969M3 257 aa13.67□□□□□ -0.22
ERGIC3-217ENST00000488935 SLC35B4Q969S0 331 aa13.67□□□□□ -0.22
ERGIC3-217ENST00000488935 MRPL24Q96A35 216 aaKnown RBP13.67□□□□□ -0.22
ERGIC3-217ENST00000488935 TSPAN32Q96QS1 320 aa13.67□□□□□ -0.22
ERGIC3-217ENST00000488935 MCHR1Q99705 422 aa13.67□□□□□ -0.22
ERGIC3-217ENST00000488935 DUSP13Q9UII6 198 aa13.67□□□□□ -0.22
ERGIC3-217ENST00000488935 LOC102725191A0A1B0GVB3 256 aa13.66□□□□□ -0.22
ERGIC3-217ENST00000488935 FAM157AC9JC47 383 aa13.66□□□□□ -0.22
ERGIC3-217ENST00000488935 AKAP8O43823 692 aaKnown RBP13.66□□□□□ -0.22
ERGIC3-217ENST00000488935 NCR1O76036 304 aa13.66□□□□□ -0.22
ERGIC3-217ENST00000488935 MFN2O95140 757 aa13.66□□□□□ -0.22
ERGIC3-217ENST00000488935 CH25HO95992 272 aa13.66□□□□□ -0.22
ERGIC3-217ENST00000488935 CLPTM1O96005 669 aa13.66□□□□□ -0.22
ERGIC3-217ENST00000488935 FAM157BP0CG42 384 aa13.66□□□□□ -0.22
ERGIC3-217ENST00000488935 ADORA3P0DMS8 318 aa13.66□□□□□ -0.22
ERGIC3-217ENST00000488935 SLC6A2P23975 617 aa13.66□□□□□ -0.22
ERGIC3-217ENST00000488935 SLC18A1P54219 525 aa13.66□□□□□ -0.22
ERGIC3-217ENST00000488935 CDH15P55291 814 aa13.66□□□□□ -0.22
ERGIC3-217ENST00000488935 ERVS71-1P61550 626 aa13.66□□□□□ -0.22
ERGIC3-217ENST00000488935 DUSP7Q16829 419 aa13.66□□□□□ -0.22
ERGIC3-217ENST00000488935 TRMT5Q32P41 509 aaKnown RBP13.66□□□□□ -0.22
ERGIC3-217ENST00000488935 GKAP1Q5VSY0 366 aaPredicted RBP13.66□□□□□ -0.22
ERGIC3-217ENST00000488935 DLEU7Q6UYE1 221 aa13.66□□□□□ -0.22
ERGIC3-217ENST00000488935 THSD4Q6ZMP0 1018 aa13.66□□□□□ -0.22
ERGIC3-217ENST00000488935 KRT73Q86Y46 540 aa13.66□□□□□ -0.22
ERGIC3-217ENST00000488935 PTOV1Q86YD1 416 aa13.66□□□□□ -0.22
ERGIC3-217ENST00000488935 ZNF584Q8IVC4 421 aa13.66□□□□□ -0.22
ERGIC3-217ENST00000488935 PAQR4Q8N4S7 273 aaPredicted RBP13.66□□□□□ -0.22
ERGIC3-217ENST00000488935 GPR32P1Q8NGA4 272 aa13.66□□□□□ -0.22
ERGIC3-217ENST00000488935 FOXB1Q99853 325 aa13.66□□□□□ -0.22
ERGIC3-217ENST00000488935 SH3GL3Q99963 347 aa13.66□□□□□ -0.22
ERGIC3-217ENST00000488935 CPPED1Q9BRF8 314 aaPredicted RBP13.66□□□□□ -0.22
ERGIC3-217ENST00000488935 TREM2Q9NZC2 230 aa13.66□□□□□ -0.22
ERGIC3-217ENST00000488935 TESQ9UGI8 421 aaKnown RBP13.66□□□□□ -0.22
ERGIC3-217ENST00000488935 SLC13A4Q9UKG4 626 aa13.66□□□□□ -0.22
ERGIC3-217ENST00000488935 PRDM4Q9UKN5 801 aa13.66□□□□□ -0.22
ERGIC3-217ENST00000488935 NOX1Q9Y5S8 564 aa13.66□□□□□ -0.22
ERGIC3-217ENST00000488935 ARHGAP32A7KAX9 2087 aa13.66□□□□□ -0.22
ERGIC3-217ENST00000488935 SYNGR3O43761 229 aa13.65□□□□□ -0.22
ERGIC3-217ENST00000488935 LYPD3O95274 346 aa13.65□□□□□ -0.22
ERGIC3-217ENST00000488935 ERCC1P07992 297 aaPredicted RBP13.65□□□□□ -0.22
ERGIC3-217ENST00000488935 CSNK1A1P48729 337 aa13.65□□□□□ -0.22
ERGIC3-217ENST00000488935 MTPNP58546 118 aa13.65□□□□□ -0.22
ERGIC3-217ENST00000488935 MYBPC1Q00872 1141 aa13.65□□□□□ -0.22
ERGIC3-217ENST00000488935 HNRNPA0Q13151 305 aaKnown RBP13.65□□□□□ -0.22
ERGIC3-217ENST00000488935 SQLEQ14534 574 aa13.65□□□□□ -0.22
ERGIC3-217ENST00000488935 BEND6Q5SZJ8 279 aaPredicted RBP13.65□□□□□ -0.22
ERGIC3-217ENST00000488935 FAM91A1Q658Y4 838 aa13.65□□□□□ -0.22
ERGIC3-217ENST00000488935 ADPRHL1Q8NDY3 354 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms