RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 OR6A2O95222 327 aa16.38■□□□□ 0.21
PTCD3-217ENST00000488801 HOXB6P17509 224 aaKnown RBP16.38■□□□□ 0.21
PTCD3-217ENST00000488801 IL1RL1Q01638 556 aa16.38■□□□□ 0.21
PTCD3-217ENST00000488801 CHRNB3Q05901 458 aa16.38■□□□□ 0.21
PTCD3-217ENST00000488801 FAM98BQ52LJ0 330 aaKnown RBP16.38■□□□□ 0.21
PTCD3-217ENST00000488801 TIMM23BQ5SRD1 257 aa16.38■□□□□ 0.21
PTCD3-217ENST00000488801 C1QTNF12Q5T7M4 302 aa16.38■□□□□ 0.21
PTCD3-217ENST00000488801 SSX8Q7RTT4 187 aa16.38■□□□□ 0.21
PTCD3-217ENST00000488801 ABHD12BQ7Z5M8 362 aaPredicted RBP16.38■□□□□ 0.21
PTCD3-217ENST00000488801 OR52J3Q8NH60 311 aa16.38■□□□□ 0.21
PTCD3-217ENST00000488801 CANT1Q8WVQ1 401 aa16.38■□□□□ 0.21
PTCD3-217ENST00000488801 ASB10Q8WXI3 467 aa16.38■□□□□ 0.21
PTCD3-217ENST00000488801 FAM46AQ96IP4 442 aaKnown RBP16.38■□□□□ 0.21
PTCD3-217ENST00000488801 LRGUKQ96M69 825 aa16.38■□□□□ 0.21
PTCD3-217ENST00000488801 VNN3Q9NY84 501 aa16.38■□□□□ 0.21
PTCD3-217ENST00000488801 TRAV27A0A087WT01 109 aa16.37■□□□□ 0.21
PTCD3-217ENST00000488801 DHRS12A0PJE2 317 aa16.37■□□□□ 0.21
PTCD3-217ENST00000488801 CENPBD1B2RD01 187 aa16.37■□□□□ 0.21
PTCD3-217ENST00000488801 KRT36O76013 467 aa16.37■□□□□ 0.21
PTCD3-217ENST00000488801 PGA4P0DJD7 388 aa16.37■□□□□ 0.21
PTCD3-217ENST00000488801 PGA3P0DJD8 388 aa16.37■□□□□ 0.21
PTCD3-217ENST00000488801 SAGP10523 405 aaPredicted RBP16.37■□□□□ 0.21
PTCD3-217ENST00000488801 BIDP55957 195 aa16.37■□□□□ 0.21
PTCD3-217ENST00000488801 FXYD6P3P58550 94 aa16.37■□□□□ 0.21
PTCD3-217ENST00000488801 STK11Q15831 433 aa16.37■□□□□ 0.21
PTCD3-217ENST00000488801 HIST3H3Q16695 136 aa16.37■□□□□ 0.21
PTCD3-217ENST00000488801 ARMC4Q5T2S8 1044 aa16.37■□□□□ 0.21
PTCD3-217ENST00000488801 OR7E24Q6IFN5 339 aa16.37■□□□□ 0.21
PTCD3-217ENST00000488801 ZNF770Q6IQ21 691 aaPredicted RBP16.37■□□□□ 0.21
PTCD3-217ENST00000488801 ZNF627Q7L945 461 aa16.37■□□□□ 0.21
PTCD3-217ENST00000488801 ZER1Q7Z7L7 766 aa16.37■□□□□ 0.21
PTCD3-217ENST00000488801 PAPD5Q8NDF8 572 aaKnown RBP16.37■□□□□ 0.21
PTCD3-217ENST00000488801 HSD17B8Q92506 261 aa16.37■□□□□ 0.21
PTCD3-217ENST00000488801 TMEM54Q969K7 222 aa16.37■□□□□ 0.21
PTCD3-217ENST00000488801 ZNF837Q96EG3 531 aaPredicted RBP16.37■□□□□ 0.21
PTCD3-217ENST00000488801 ALPK1Q96QP1 1244 aa16.37■□□□□ 0.21
PTCD3-217ENST00000488801 GPX7Q96SL4 187 aaPredicted RBP16.37■□□□□ 0.21
PTCD3-217ENST00000488801 GPA33Q99795 319 aa16.37■□□□□ 0.21
PTCD3-217ENST00000488801 MRPL13Q9BYD1 178 aaKnown RBP16.37■□□□□ 0.21
PTCD3-217ENST00000488801 GPR35Q9HC97 309 aa16.37■□□□□ 0.21
PTCD3-217ENST00000488801 INIPQ9NRY2 104 aa16.37■□□□□ 0.21
PTCD3-217ENST00000488801 SIGLEC7Q9Y286 467 aa16.37■□□□□ 0.21
PTCD3-217ENST00000488801 SLC25A15Q9Y619 301 aa16.37■□□□□ 0.21
PTCD3-217ENST00000488801 PTP4A3O75365 173 aa16.36■□□□□ 0.21
PTCD3-217ENST00000488801 SERPINI2O75830 405 aa16.36■□□□□ 0.21
PTCD3-217ENST00000488801 STAMBPO95630 424 aa16.36■□□□□ 0.21
PTCD3-217ENST00000488801 F13BP05160 661 aa16.36■□□□□ 0.21
PTCD3-217ENST00000488801 ZNF133P52736 654 aaPredicted RBP16.36■□□□□ 0.21
PTCD3-217ENST00000488801 SH3BGRP55822 239 aaPredicted RBP16.36■□□□□ 0.21
PTCD3-217ENST00000488801 CBX1P83916 185 aa16.36■□□□□ 0.21
PTCD3-217ENST00000488801 ROR2Q01974 943 aaKnown RBP16.36■□□□□ 0.21
PTCD3-217ENST00000488801 CAMK2DQ13557 499 aa16.36■□□□□ 0.21
PTCD3-217ENST00000488801 MELKQ14680 651 aa16.36■□□□□ 0.21
PTCD3-217ENST00000488801 LAPTM4AQ15012 233 aa16.36■□□□□ 0.21
PTCD3-217ENST00000488801 TAF11Q15544 211 aa16.36■□□□□ 0.21
PTCD3-217ENST00000488801 ACKR1Q16570 336 aa16.36■□□□□ 0.21
PTCD3-217ENST00000488801 ALG10Q5BKT4 473 aa16.36■□□□□ 0.21
PTCD3-217ENST00000488801 OAFQ86UD1 273 aa16.36■□□□□ 0.21
PTCD3-217ENST00000488801 WDR31Q8NA23 367 aa16.36■□□□□ 0.21
PTCD3-217ENST00000488801 OR1K1Q8NGR3 316 aa16.36■□□□□ 0.21
PTCD3-217ENST00000488801 MAGEE2Q8TD90 523 aaPredicted RBP16.36■□□□□ 0.21
PTCD3-217ENST00000488801 UTP4Q969X6 686 aaKnown RBP16.36■□□□□ 0.21
PTCD3-217ENST00000488801 NMD3Q96D46 503 aaKnown RBP16.36■□□□□ 0.21
PTCD3-217ENST00000488801 SLC25A44Q96H78 314 aaPredicted RBP16.36■□□□□ 0.21
PTCD3-217ENST00000488801 ZC3HAV1LQ96H79 300 aaKnown RBP16.36■□□□□ 0.21
PTCD3-217ENST00000488801 TXNIPQ9H3M7 391 aa16.36■□□□□ 0.21
PTCD3-217ENST00000488801 SLC17A5Q9NRA2 495 aa16.36■□□□□ 0.21
PTCD3-217ENST00000488801 NPAP1Q9NZP6 1156 aa16.36■□□□□ 0.21
PTCD3-217ENST00000488801 PRRC2AP48634 2157 aaKnown RBP16.36■□□□□ 0.21
PTCD3-217ENST00000488801 CHD3Q12873 2000 aaKnown RBP16.35■□□□□ 0.21
PTCD3-217ENST00000488801 A0A1W2PRG6 482 aa16.35■□□□□ 0.21
PTCD3-217ENST00000488801 FPR3P25089 353 aa16.35■□□□□ 0.21
PTCD3-217ENST00000488801 GSSP48637 474 aa16.35■□□□□ 0.21
PTCD3-217ENST00000488801 DAP3P51398 398 aaKnown RBP16.35■□□□□ 0.21
PTCD3-217ENST00000488801 PRPS1P60891 318 aa16.35■□□□□ 0.21
PTCD3-217ENST00000488801 TGFBR3Q03167 851 aa16.35■□□□□ 0.21
PTCD3-217ENST00000488801 RUNX1T1Q06455 604 aa16.35■□□□□ 0.21
PTCD3-217ENST00000488801 GK3PQ14409 553 aa16.35■□□□□ 0.21
PTCD3-217ENST00000488801 ZBED5Q49AG3 693 aa16.35■□□□□ 0.21
PTCD3-217ENST00000488801 BEX5Q5H9J7 111 aa16.35■□□□□ 0.21
PTCD3-217ENST00000488801 C9orf135Q5VTT2 229 aa16.35■□□□□ 0.21
PTCD3-217ENST00000488801 OR2T5Q6IEZ7 315 aa16.35■□□□□ 0.21
PTCD3-217ENST00000488801 C1orf94Q6P1W5 598 aa16.35■□□□□ 0.21
PTCD3-217ENST00000488801 PGBD2Q6P3X8 592 aa16.35■□□□□ 0.21
PTCD3-217ENST00000488801 RRM2BQ7LG56 351 aa16.35■□□□□ 0.21
PTCD3-217ENST00000488801 CDK20Q8IZL9 346 aa16.35■□□□□ 0.21
PTCD3-217ENST00000488801 NOXO1Q8NFA2 376 aa16.35■□□□□ 0.21
PTCD3-217ENST00000488801 OR2T29Q8NH02 315 aa16.35■□□□□ 0.21
PTCD3-217ENST00000488801 ZNF519Q8TB69 540 aa16.35■□□□□ 0.21
PTCD3-217ENST00000488801 SLCO4A1Q96BD0 722 aa16.35■□□□□ 0.21
PTCD3-217ENST00000488801 RSRC1Q96IZ7 334 aaKnown RBP16.35■□□□□ 0.21
PTCD3-217ENST00000488801 LURAP1Q96LR2 239 aa16.35■□□□□ 0.21
PTCD3-217ENST00000488801 TNFRSF13CQ96RJ3 184 aa16.35■□□□□ 0.21
PTCD3-217ENST00000488801 TMEM204Q9BSN7 226 aa16.35■□□□□ 0.21
PTCD3-217ENST00000488801 CRLF2Q9HC73 371 aa16.35■□□□□ 0.21
PTCD3-217ENST00000488801 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.35■□□□□ 0.21
PTCD3-217ENST00000488801 ARFGEF3Q5TH69 2177 aa16.34■□□□□ 0.21
PTCD3-217ENST00000488801 ARPC4-TTLL3A0A0A6YYG9 625 aa16.34■□□□□ 0.21
PTCD3-217ENST00000488801 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.34■□□□□ 0.21
PTCD3-217ENST00000488801 CIB4A0PJX0 185 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms