RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 DKK1O94907 266 aa12.48□□□□□ -0.41
COPS7B-221ENST00000488111 TFP02787 698 aa12.48□□□□□ -0.41
COPS7B-221ENST00000488111 MT-ND4P03905 459 aa12.48□□□□□ -0.41
COPS7B-221ENST00000488111 HOXA1P49639 335 aaPredicted RBP12.48□□□□□ -0.41
COPS7B-221ENST00000488111 KHKP50053 298 aa12.48□□□□□ -0.41
COPS7B-221ENST00000488111 S100A12P80511 92 aa12.48□□□□□ -0.41
COPS7B-221ENST00000488111 MRPL14Q6P1L8 145 aaKnown RBP12.48□□□□□ -0.41
COPS7B-221ENST00000488111 Q6ZTK2 550 aa12.48□□□□□ -0.41
COPS7B-221ENST00000488111 COMTD1Q86VU5 262 aa12.48□□□□□ -0.41
COPS7B-221ENST00000488111 FAM71CQ8NEG0 241 aa12.48□□□□□ -0.41
COPS7B-221ENST00000488111 CDS1Q92903 461 aa12.48□□□□□ -0.41
COPS7B-221ENST00000488111 SPSB2Q99619 263 aa12.48□□□□□ -0.41
COPS7B-221ENST00000488111 OR8D2Q9GZM6 311 aa12.48□□□□□ -0.41
COPS7B-221ENST00000488111 GPN3Q9UHW5 284 aaPredicted RBP12.48□□□□□ -0.41
COPS7B-221ENST00000488111 DTX4Q9Y2E6 619 aa12.48□□□□□ -0.41
COPS7B-221ENST00000488111 SLC9A8Q9Y2E8 581 aa12.48□□□□□ -0.41
COPS7B-221ENST00000488111 PTPRZ1P23471 2315 aaPredicted RBP12.48□□□□□ -0.41
COPS7B-221ENST00000488111 MPTX1A8MV57 137 aa12.48□□□□□ -0.41
COPS7B-221ENST00000488111 MCRIP1C9JLW8 97 aa12.48□□□□□ -0.41
COPS7B-221ENST00000488111 GSTZ1O43708 216 aaPredicted RBP12.48□□□□□ -0.41
COPS7B-221ENST00000488111 ONECUT2O95948 504 aa12.48□□□□□ -0.41
COPS7B-221ENST00000488111 GIPP09681 153 aaPredicted RBP12.48□□□□□ -0.41
COPS7B-221ENST00000488111 NR2F1P10589 423 aa12.48□□□□□ -0.41
COPS7B-221ENST00000488111 CSRP1P21291 193 aaKnown RBP12.48□□□□□ -0.41
COPS7B-221ENST00000488111 EMP2P54851 167 aa12.48□□□□□ -0.41
COPS7B-221ENST00000488111 OR10A3P58181 314 aa12.48□□□□□ -0.41
COPS7B-221ENST00000488111 PITPNAQ00169 270 aa12.48□□□□□ -0.41
COPS7B-221ENST00000488111 DUSP5Q16690 384 aa12.48□□□□□ -0.41
COPS7B-221ENST00000488111 TIPARPQ7Z3E1 657 aaKnown RBP12.48□□□□□ -0.41
COPS7B-221ENST00000488111 TPRA1Q86W33 373 aa12.48□□□□□ -0.41
COPS7B-221ENST00000488111 PM20D2Q8IYS1 436 aa12.48□□□□□ -0.41
COPS7B-221ENST00000488111 SPICQ8N5J4 248 aa12.48□□□□□ -0.41
COPS7B-221ENST00000488111 PLPP5Q8NEB5 264 aa12.48□□□□□ -0.41
COPS7B-221ENST00000488111 COQ8AQ8NI60 647 aa12.48□□□□□ -0.41
COPS7B-221ENST00000488111 CNOT9Q92600 299 aaKnown RBP12.48□□□□□ -0.41
COPS7B-221ENST00000488111 ZNF607Q96SK3 696 aa12.48□□□□□ -0.41
COPS7B-221ENST00000488111 SAV1Q9H4B6 383 aaPredicted RBP12.48□□□□□ -0.41
COPS7B-221ENST00000488111 ZCCHC4Q9H5U6 513 aa12.48□□□□□ -0.41
COPS7B-221ENST00000488111 BEX1Q9HBH7 125 aa12.48□□□□□ -0.41
COPS7B-221ENST00000488111 SEC14L3Q9UDX4 400 aa12.48□□□□□ -0.41
COPS7B-221ENST00000488111 SIRT4Q9Y6E7 314 aaPredicted RBP12.48□□□□□ -0.41
COPS7B-221ENST00000488111 KNTC1P50748 2209 aa12.47□□□□□ -0.41
COPS7B-221ENST00000488111 GVINP1Q7Z2Y8 2422 aa12.47□□□□□ -0.41
COPS7B-221ENST00000488111 TRABD2BA6NFA1 517 aa12.47□□□□□ -0.41
COPS7B-221ENST00000488111 M0R3H8 397 aa12.47□□□□□ -0.41
COPS7B-221ENST00000488111 TNFSF15O95150 251 aa12.47□□□□□ -0.41
COPS7B-221ENST00000488111 SDHBP21912 280 aa12.47□□□□□ -0.41
COPS7B-221ENST00000488111 EMDP50402 254 aa12.47□□□□□ -0.41
COPS7B-221ENST00000488111 FUT5Q11128 374 aa12.47□□□□□ -0.41
COPS7B-221ENST00000488111 SNTB2Q13425 540 aaKnown RBP12.47□□□□□ -0.41
COPS7B-221ENST00000488111 HLXQ14774 488 aaPredicted RBP12.47□□□□□ -0.41
COPS7B-221ENST00000488111 ZSWIM7Q19AV6 140 aa12.47□□□□□ -0.41
COPS7B-221ENST00000488111 CDC73Q6P1J9 531 aa12.47□□□□□ -0.41
COPS7B-221ENST00000488111 LRFN5Q96NI6 719 aa12.47□□□□□ -0.41
COPS7B-221ENST00000488111 CRB3Q9BUF7 120 aa12.47□□□□□ -0.41
COPS7B-221ENST00000488111 OR10A5Q9H207 317 aa12.47□□□□□ -0.41
COPS7B-221ENST00000488111 NANSQ9NR45 359 aa12.47□□□□□ -0.41
COPS7B-221ENST00000488111 C14orf105Q9NVL8 296 aa12.47□□□□□ -0.41
COPS7B-221ENST00000488111 P2RX2Q9UBL9 471 aa12.47□□□□□ -0.41
COPS7B-221ENST00000488111 FBXL2Q9UKC9 423 aa12.47□□□□□ -0.41
COPS7B-221ENST00000488111 A0A1B0GUH1 482 aa12.47□□□□□ -0.41
COPS7B-221ENST00000488111 LRRN3E7EW58 273 aa12.47□□□□□ -0.41
COPS7B-221ENST00000488111 J3QRE1 110 aa12.47□□□□□ -0.41
COPS7B-221ENST00000488111 GMDSO60547 372 aa12.47□□□□□ -0.41
COPS7B-221ENST00000488111 ALOX12BO75342 701 aa12.47□□□□□ -0.41
COPS7B-221ENST00000488111 CEACAM1P13688 526 aa12.47□□□□□ -0.41
COPS7B-221ENST00000488111 DRD5P21918 477 aa12.47□□□□□ -0.41
COPS7B-221ENST00000488111 NFYAP23511 347 aaPredicted RBP12.47□□□□□ -0.41
COPS7B-221ENST00000488111 HTR1FP30939 366 aa12.47□□□□□ -0.41
COPS7B-221ENST00000488111 EIF3IQ13347 325 aaKnown RBP12.47□□□□□ -0.41
COPS7B-221ENST00000488111 NNATQ16517 81 aa12.47□□□□□ -0.41
COPS7B-221ENST00000488111 RNASE12Q5GAN4 147 aaKnown RBP12.47□□□□□ -0.41
COPS7B-221ENST00000488111 GNPDA2Q8TDQ7 276 aa12.47□□□□□ -0.41
COPS7B-221ENST00000488111 C8orf44Q96CB5 159 aa12.47□□□□□ -0.41
COPS7B-221ENST00000488111 DDA1Q9BW61 102 aa12.47□□□□□ -0.41
COPS7B-221ENST00000488111 CHIAQ9BZP6 476 aa12.47□□□□□ -0.41
COPS7B-221ENST00000488111 FAM186AA6NE01 2351 aa12.46□□□□□ -0.41
COPS7B-221ENST00000488111 OR2M5A3KFT3 312 aa12.46□□□□□ -0.41
COPS7B-221ENST00000488111 GFRA3O60609 400 aa12.46□□□□□ -0.41
COPS7B-221ENST00000488111 SLC34A2O95436 690 aa12.46□□□□□ -0.41
COPS7B-221ENST00000488111 CLPSP04118 112 aa12.46□□□□□ -0.41
COPS7B-221ENST00000488111 CHRM4P08173 479 aa12.46□□□□□ -0.41
COPS7B-221ENST00000488111 GABRA3P34903 492 aa12.46□□□□□ -0.41
COPS7B-221ENST00000488111 FUT7Q11130 342 aa12.46□□□□□ -0.41
COPS7B-221ENST00000488111 BIKQ13323 160 aa12.46□□□□□ -0.41
COPS7B-221ENST00000488111 ELAVL1Q15717 326 aaKnown RBP12.46□□□□□ -0.41
COPS7B-221ENST00000488111 PABPC1L2AQ5JQF8 200 aa12.46□□□□□ -0.41
COPS7B-221ENST00000488111 SFRP5Q5T4F7 317 aa12.46□□□□□ -0.41
COPS7B-221ENST00000488111 TMEM164Q5U3C3 297 aa12.46□□□□□ -0.41
COPS7B-221ENST00000488111 METTL11BQ5VVY1 283 aa12.46□□□□□ -0.41
COPS7B-221ENST00000488111 C6orf15Q6UXA7 325 aaPredicted RBP12.46□□□□□ -0.41
COPS7B-221ENST00000488111 C17orf107Q6ZR85 190 aa12.46□□□□□ -0.41
COPS7B-221ENST00000488111 ANKRD37Q7Z713 158 aa12.46□□□□□ -0.41
COPS7B-221ENST00000488111 LINC00469Q8N7U9 141 aa12.46□□□□□ -0.41
COPS7B-221ENST00000488111 FAM98AQ8NCA5 519 aaKnown RBP12.46□□□□□ -0.41
COPS7B-221ENST00000488111 OR11G2Q8NGC1 345 aa12.46□□□□□ -0.41
COPS7B-221ENST00000488111 OR1S1Q8NH92 325 aa12.46□□□□□ -0.41
COPS7B-221ENST00000488111 C16orf52Q8NHV5 167 aa12.46□□□□□ -0.41
COPS7B-221ENST00000488111 SLC2A12Q8TD20 617 aa12.46□□□□□ -0.41
COPS7B-221ENST00000488111 METTL21AQ8WXB1 218 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms