RNA–Protein interactions for RNA: ENST00000488017.1

SMC4-220, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-220ENST00000488017 PCM1Q15154 2024 aa1.26□□□□□ -2.21
SMC4-220ENST00000488017 PIKFYVEQ9Y2I7 2098 aa1.25□□□□□ -2.21
SMC4-220ENST00000488017 MSH6P52701 1360 aa1.25□□□□□ -2.21
SMC4-220ENST00000488017 MROH7-TTC4A0A0A0MT08 1334 aa1.25□□□□□ -2.21
SMC4-220ENST00000488017 TRAV26-1A0A087WT03 109 aa1.25□□□□□ -2.21
SMC4-220ENST00000488017 C12orf71A8MTZ7 269 aa1.25□□□□□ -2.21
SMC4-220ENST00000488017 B4GALT5O43286 388 aa1.25□□□□□ -2.21
SMC4-220ENST00000488017 ANGPTL7O43827 346 aa1.25□□□□□ -2.21
SMC4-220ENST00000488017 CD5LO43866 347 aa1.25□□□□□ -2.21
SMC4-220ENST00000488017 MTX2O75431 263 aa1.25□□□□□ -2.21
SMC4-220ENST00000488017 CTDNEP1O95476 244 aa1.25□□□□□ -2.21
SMC4-220ENST00000488017 IGLV2-23P01705 113 aa1.25□□□□□ -2.21
SMC4-220ENST00000488017 ALDOBP05062 364 aa1.25□□□□□ -2.21
SMC4-220ENST00000488017 RNASE2P10153 161 aaKnown RBP1.25□□□□□ -2.21
SMC4-220ENST00000488017 IL12AP29459 219 aa1.25□□□□□ -2.21
SMC4-220ENST00000488017 SLC26A3P40879 764 aa1.25□□□□□ -2.21
SMC4-220ENST00000488017 OPRD1P41143 372 aa1.25□□□□□ -2.21
SMC4-220ENST00000488017 GRIA1P42261 906 aa1.25□□□□□ -2.21
SMC4-220ENST00000488017 CXCL5P42830 114 aa1.25□□□□□ -2.21
SMC4-220ENST00000488017 MAGEA8P43361 318 aa1.25□□□□□ -2.21
SMC4-220ENST00000488017 CCT3P49368 545 aaKnown RBP1.25□□□□□ -2.21
SMC4-220ENST00000488017 CRYBB1P53674 252 aaPredicted RBP1.25□□□□□ -2.21
SMC4-220ENST00000488017 ATP1B3P54709 279 aa1.25□□□□□ -2.21
SMC4-220ENST00000488017 FGF8P55075 233 aaPredicted RBP1.25□□□□□ -2.21
SMC4-220ENST00000488017 UBE2HP62256 183 aa1.25□□□□□ -2.21
SMC4-220ENST00000488017 TNFRSF17Q02223 184 aa1.25□□□□□ -2.21
SMC4-220ENST00000488017 FGL1Q08830 312 aa1.25□□□□□ -2.21
SMC4-220ENST00000488017 CYTH1Q15438 398 aa1.25□□□□□ -2.21
SMC4-220ENST00000488017 EXOC3L2Q2M3D2 409 aa1.25□□□□□ -2.21
SMC4-220ENST00000488017 CHRFAM7AQ494W8 412 aa1.25□□□□□ -2.21
SMC4-220ENST00000488017 FILIP1LQ4L180 1135 aa1.25□□□□□ -2.21
SMC4-220ENST00000488017 LY6G6FQ5SQ64 297 aa1.25□□□□□ -2.21
SMC4-220ENST00000488017 CNIH2Q6PI25 160 aa1.25□□□□□ -2.21
SMC4-220ENST00000488017 SLC25A34Q6PIV7 304 aa1.25□□□□□ -2.21
SMC4-220ENST00000488017 C19orf35Q6ZS72 473 aa1.25□□□□□ -2.21
SMC4-220ENST00000488017 FAM43BQ6ZT52 329 aaPredicted RBP1.25□□□□□ -2.21
SMC4-220ENST00000488017 TRIM69Q86WT6 500 aa1.25□□□□□ -2.21
SMC4-220ENST00000488017 CALHM3Q86XJ0 350 aa1.25□□□□□ -2.21
SMC4-220ENST00000488017 ZADH2Q8N4Q0 377 aa1.25□□□□□ -2.21
SMC4-220ENST00000488017 FNDC5Q8NAU1 212 aa1.25□□□□□ -2.21
SMC4-220ENST00000488017 OR5D13Q8NGL4 314 aa1.25□□□□□ -2.21
SMC4-220ENST00000488017 MCOLN3Q8TDD5 553 aa1.25□□□□□ -2.21
SMC4-220ENST00000488017 C10orf35Q96D05 121 aa1.25□□□□□ -2.21
SMC4-220ENST00000488017 DNAJC19Q96DA6 116 aa1.25□□□□□ -2.21
SMC4-220ENST00000488017 ASB9Q96DX5 294 aa1.25□□□□□ -2.21
SMC4-220ENST00000488017 COQ2Q96H96 371 aa1.25□□□□□ -2.21
SMC4-220ENST00000488017 ZNF641Q96N77 438 aaPredicted RBP1.25□□□□□ -2.21
SMC4-220ENST00000488017 TMEM43Q9BTV4 400 aa1.25□□□□□ -2.21
SMC4-220ENST00000488017 PARD6BQ9BYG5 372 aa1.25□□□□□ -2.21
SMC4-220ENST00000488017 DNTTIP1Q9H147 329 aa1.25□□□□□ -2.21
SMC4-220ENST00000488017 GBA3Q9H227 469 aa1.25□□□□□ -2.21
SMC4-220ENST00000488017 SLCO1B3Q9NPD5 702 aa1.25□□□□□ -2.21
SMC4-220ENST00000488017 GLRX2Q9NS18 164 aa1.25□□□□□ -2.21
SMC4-220ENST00000488017 ZNF226Q9NYT6 803 aa1.25□□□□□ -2.21
SMC4-220ENST00000488017 BFARQ9NZS9 450 aa1.25□□□□□ -2.21
SMC4-220ENST00000488017 XCL2Q9UBD3 114 aa1.25□□□□□ -2.21
SMC4-220ENST00000488017 MARCOQ9UEW3 520 aaPredicted RBP1.25□□□□□ -2.21
SMC4-220ENST00000488017 PCYOX1Q9UHG3 505 aa1.25□□□□□ -2.21
SMC4-220ENST00000488017 ADAM28Q9UKQ2 775 aa1.25□□□□□ -2.21
SMC4-220ENST00000488017 CDH9Q9ULB4 789 aa1.25□□□□□ -2.21
SMC4-220ENST00000488017 CLEC4AQ9UMR7 237 aa1.25□□□□□ -2.21
SMC4-220ENST00000488017 MRPS7Q9Y2R9 242 aaKnown RBP1.25□□□□□ -2.21
SMC4-220ENST00000488017 YTHDF2Q9Y5A9 579 aaKnown RBP1.25□□□□□ -2.21
SMC4-220ENST00000488017 F11RQ9Y624 299 aaKnown RBP1.25□□□□□ -2.21
SMC4-220ENST00000488017 FANCIQ9NVI1 1328 aa1.24□□□□□ -2.21
SMC4-220ENST00000488017 IGKV1D-13A0A0B4J2D9 117 aa1.24□□□□□ -2.21
SMC4-220ENST00000488017 A0A1B0GVL5 298 aa1.24□□□□□ -2.21
SMC4-220ENST00000488017 PLAC8L1A1L4L8 177 aa1.24□□□□□ -2.21
SMC4-220ENST00000488017 PRSS37A4D1T9 235 aa1.24□□□□□ -2.21
SMC4-220ENST00000488017 SLC31A2O15432 143 aa1.24□□□□□ -2.21
SMC4-220ENST00000488017 ZNF208O43345 1280 aa1.24□□□□□ -2.21
SMC4-220ENST00000488017 SCGNO76038 276 aa1.24□□□□□ -2.21
SMC4-220ENST00000488017 RHOBTB1O94844 696 aa1.24□□□□□ -2.21
SMC4-220ENST00000488017 CAPN1P07384 714 aa1.24□□□□□ -2.21
SMC4-220ENST00000488017 IGKV1-13P0DP09 117 aa1.24□□□□□ -2.21
SMC4-220ENST00000488017 HPGDP15428 266 aa1.24□□□□□ -2.21
SMC4-220ENST00000488017 ZNF30P17039 623 aa1.24□□□□□ -2.21
SMC4-220ENST00000488017 SLC2A5P22732 501 aa1.24□□□□□ -2.21
SMC4-220ENST00000488017 CMA1P23946 247 aa1.24□□□□□ -2.21
SMC4-220ENST00000488017 NCBP1Q09161 790 aaKnown RBP1.24□□□□□ -2.21
SMC4-220ENST00000488017 SGCAQ16586 387 aa1.24□□□□□ -2.21
SMC4-220ENST00000488017 KRTAP13-2Q52LG2 175 aa1.24□□□□□ -2.21
SMC4-220ENST00000488017 NANOGP8Q6NSW7 305 aa1.24□□□□□ -2.21
SMC4-220ENST00000488017 PMF1Q6P1K2 205 aa1.24□□□□□ -2.21
SMC4-220ENST00000488017 ENPP6Q6UWR7 440 aa1.24□□□□□ -2.21
SMC4-220ENST00000488017 Q6ZPB1 254 aaPredicted RBP1.24□□□□□ -2.21
SMC4-220ENST00000488017 LINC00173Q6ZV60 143 aa1.24□□□□□ -2.21
SMC4-220ENST00000488017 PLA2G4DQ86XP0 818 aa1.24□□□□□ -2.21
SMC4-220ENST00000488017 NUDCD3Q8IVD9 361 aa1.24□□□□□ -2.21
SMC4-220ENST00000488017 CNPY4Q8N129 248 aa1.24□□□□□ -2.21
SMC4-220ENST00000488017 Q8N976 141 aa1.24□□□□□ -2.21
SMC4-220ENST00000488017 STEAP2Q8NFT2 490 aa1.24□□□□□ -2.21
SMC4-220ENST00000488017 OR52M1Q8NGK5 317 aa1.24□□□□□ -2.21
SMC4-220ENST00000488017 OR1N2Q8NGR9 330 aa1.24□□□□□ -2.21
SMC4-220ENST00000488017 OR2G3Q8NGZ4 309 aa1.24□□□□□ -2.21
SMC4-220ENST00000488017 ZFP90Q8TF47 636 aa1.24□□□□□ -2.21
SMC4-220ENST00000488017 PYROXD1Q8WU10 500 aa1.24□□□□□ -2.21
SMC4-220ENST00000488017 SMARCD2Q92925 531 aa1.24□□□□□ -2.21
SMC4-220ENST00000488017 RPRD1AQ96P16 312 aaPredicted RBP1.24□□□□□ -2.21
SMC4-220ENST00000488017 MS4A4EQ96PG1 132 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms