RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 CCND2P30279 289 aa1.33□□□□□ -2.2
SMC4-219ENST00000487747 ACADVLP49748 655 aa1.33□□□□□ -2.2
SMC4-219ENST00000487747 ZNF619Q8N2I2 560 aa1.33□□□□□ -2.2
SMC4-219ENST00000487747 FAM3CQ92520 227 aa1.33□□□□□ -2.2
SMC4-219ENST00000487747 NARS2Q96I59 477 aaKnown RBP1.33□□□□□ -2.2
SMC4-219ENST00000487747 OXGR1Q96P68 337 aa1.33□□□□□ -2.2
SMC4-219ENST00000487747 LZTS2Q9BRK4 669 aa1.33□□□□□ -2.2
SMC4-219ENST00000487747 FICDQ9BVA6 458 aa1.33□□□□□ -2.2
SMC4-219ENST00000487747 RSPH9Q9H1X1 276 aaPredicted RBP1.33□□□□□ -2.2
SMC4-219ENST00000487747 LINC00597Q9H2U6 94 aa1.33□□□□□ -2.2
SMC4-219ENST00000487747 DBNDD1Q9H9R9 158 aa1.33□□□□□ -2.2
SMC4-219ENST00000487747 NPIPA1Q9UND3 350 aa1.33□□□□□ -2.2
SMC4-219ENST00000487747 COPS3Q9UNS2 423 aa1.33□□□□□ -2.2
SMC4-219ENST00000487747 KDRP35968 1356 aa1.33□□□□□ -2.2
SMC4-219ENST00000487747 BAHCC1Q9P281 2608 aa1.32□□□□□ -2.2
SMC4-219ENST00000487747 IGKV1D-13A0A0B4J2D9 117 aa1.32□□□□□ -2.2
SMC4-219ENST00000487747 A0A1W2PNV4 684 aa1.32□□□□□ -2.2
SMC4-219ENST00000487747 DNASE2O00115 360 aaPredicted RBP1.32□□□□□ -2.2
SMC4-219ENST00000487747 KMOO15229 486 aa1.32□□□□□ -2.2
SMC4-219ENST00000487747 TAPBPO15533 448 aa1.32□□□□□ -2.2
SMC4-219ENST00000487747 OR1F1O43749 312 aa1.32□□□□□ -2.2
SMC4-219ENST00000487747 CHST1O43916 411 aa1.32□□□□□ -2.2
SMC4-219ENST00000487747 IGKV1-13P0DP09 117 aa1.32□□□□□ -2.2
SMC4-219ENST00000487747 NT5EP21589 574 aa1.32□□□□□ -2.2
SMC4-219ENST00000487747 P2RY1P47900 373 aa1.32□□□□□ -2.2
SMC4-219ENST00000487747 TDO2P48775 406 aa1.32□□□□□ -2.2
SMC4-219ENST00000487747 CAMLGP49069 296 aa1.32□□□□□ -2.2
SMC4-219ENST00000487747 RPS21P63220 83 aaKnown RBP1.32□□□□□ -2.2
SMC4-219ENST00000487747 NUCB2P80303 420 aa1.32□□□□□ -2.2
SMC4-219ENST00000487747 AQP6Q13520 282 aa1.32□□□□□ -2.2
SMC4-219ENST00000487747 VGLL4Q14135 290 aa1.32□□□□□ -2.2
SMC4-219ENST00000487747 SASS6Q6UVJ0 657 aa1.32□□□□□ -2.2
SMC4-219ENST00000487747 H2AFVQ71UI9 128 aa1.32□□□□□ -2.2
SMC4-219ENST00000487747 CLEC4FQ8N1N0 589 aa1.32□□□□□ -2.2
SMC4-219ENST00000487747 CLDN19Q8N6F1 224 aa1.32□□□□□ -2.2
SMC4-219ENST00000487747 LRRC52Q8N7C0 313 aa1.32□□□□□ -2.2
SMC4-219ENST00000487747 STXBP6Q8NFX7 210 aa1.32□□□□□ -2.2
SMC4-219ENST00000487747 RTN4IP1Q8WWV3 396 aaPredicted RBP1.32□□□□□ -2.2
SMC4-219ENST00000487747 GEMIN6Q8WXD5 167 aaKnown RBP1.32□□□□□ -2.2
SMC4-219ENST00000487747 KLF6Q99612 283 aaPredicted RBP1.32□□□□□ -2.2
SMC4-219ENST00000487747 EDEM2Q9BV94 578 aa1.32□□□□□ -2.2
SMC4-219ENST00000487747 TMEM117Q9H0C3 514 aa1.32□□□□□ -2.2
SMC4-219ENST00000487747 REEP4Q9H6H4 257 aa1.32□□□□□ -2.2
SMC4-219ENST00000487747 DHCR7Q9UBM7 475 aaKnown RBP1.32□□□□□ -2.2
SMC4-219ENST00000487747 MMP17Q9ULZ9 603 aa1.32□□□□□ -2.2
SMC4-219ENST00000487747 BCHEP06276 602 aa1.31□□□□□ -2.2
SMC4-219ENST00000487747 OR56A5P0C7T3 313 aa1.31□□□□□ -2.2
SMC4-219ENST00000487747 OPRK1P41145 380 aa1.31□□□□□ -2.2
SMC4-219ENST00000487747 MAP3K8P41279 467 aa1.31□□□□□ -2.2
SMC4-219ENST00000487747 NAMPTP43490 491 aa1.31□□□□□ -2.2
SMC4-219ENST00000487747 MEF2CQ06413 473 aaPredicted RBP1.31□□□□□ -2.2
SMC4-219ENST00000487747 PDZK1IP1Q13113 114 aa1.31□□□□□ -2.2
SMC4-219ENST00000487747 POU2AF1Q16633 256 aa1.31□□□□□ -2.2
SMC4-219ENST00000487747 FAM78AQ5JUQ0 283 aa1.31□□□□□ -2.2
SMC4-219ENST00000487747 TMEM225Q6GV28 225 aa1.31□□□□□ -2.2
SMC4-219ENST00000487747 MOB3BQ86TA1 216 aa1.31□□□□□ -2.2
SMC4-219ENST00000487747 ACOT4Q8N9L9 421 aa1.31□□□□□ -2.2
SMC4-219ENST00000487747 ZNF382Q96SR6 550 aa1.31□□□□□ -2.2
SMC4-219ENST00000487747 RIT2Q99578 217 aa1.31□□□□□ -2.2
SMC4-219ENST00000487747 C1orf21Q9H246 121 aa1.31□□□□□ -2.2
SMC4-219ENST00000487747 PSG8Q9UQ74 426 aa1.31□□□□□ -2.2
SMC4-219ENST00000487747 A0A1B0GVI7 797 aa1.3□□□□□ -2.2
SMC4-219ENST00000487747 PRPSAP2O60256 369 aa1.3□□□□□ -2.2
SMC4-219ENST00000487747 GABARAPO95166 117 aa1.3□□□□□ -2.2
SMC4-219ENST00000487747 GLAP06280 429 aa1.3□□□□□ -2.2
SMC4-219ENST00000487747 GAP43P17677 238 aa1.3□□□□□ -2.2
SMC4-219ENST00000487747 ARF4P18085 180 aaPredicted RBP1.3□□□□□ -2.2
SMC4-219ENST00000487747 HTR2AP28223 471 aa1.3□□□□□ -2.2
SMC4-219ENST00000487747 OXA1LQ15070 435 aa1.3□□□□□ -2.2
SMC4-219ENST00000487747 BEND3Q5T5X7 828 aa1.3□□□□□ -2.2
SMC4-219ENST00000487747 SAXO2Q658L1 398 aa1.3□□□□□ -2.2
SMC4-219ENST00000487747 CNIH2Q6PI25 160 aa1.3□□□□□ -2.2
SMC4-219ENST00000487747 KCNIP4Q6PIL6 250 aa1.3□□□□□ -2.2
SMC4-219ENST00000487747 CEMP1Q6PRD7 247 aaPredicted RBP1.3□□□□□ -2.2
SMC4-219ENST00000487747 UNQ9165/PRO28630Q6UXU0 137 aa1.3□□□□□ -2.2
SMC4-219ENST00000487747 CCDC47Q96A33 483 aaKnown RBP1.3□□□□□ -2.2
SMC4-219ENST00000487747 RNF2Q99496 336 aa1.3□□□□□ -2.2
SMC4-219ENST00000487747 GPA33Q99795 319 aa1.3□□□□□ -2.2
SMC4-219ENST00000487747 ANGPTL4Q9BY76 406 aa1.3□□□□□ -2.2
SMC4-219ENST00000487747 DPH5Q9H2P9 285 aa1.3□□□□□ -2.2
SMC4-219ENST00000487747 GPRASP1Q5JY77 1395 aa1.3□□□□□ -2.2
SMC4-219ENST00000487747 IGLV3-22A0A075B6J6 115 aa1.29□□□□□ -2.2
SMC4-219ENST00000487747 LRP5LA4QPB2 252 aa1.29□□□□□ -2.2
SMC4-219ENST00000487747 J3QKU1 62 aa1.29□□□□□ -2.2
SMC4-219ENST00000487747 PLXNB1O43157 2135 aa1.29□□□□□ -2.2
SMC4-219ENST00000487747 ZSCAN12O43309 604 aa1.29□□□□□ -2.2
SMC4-219ENST00000487747 SLC25A14O95258 325 aaPredicted RBP1.29□□□□□ -2.2
SMC4-219ENST00000487747 MMP11P24347 488 aa1.29□□□□□ -2.2
SMC4-219ENST00000487747 GCAP28676 217 aa1.29□□□□□ -2.2
SMC4-219ENST00000487747 IL1RL1Q01638 556 aa1.29□□□□□ -2.2
SMC4-219ENST00000487747 TNFRSF17Q02223 184 aa1.29□□□□□ -2.2
SMC4-219ENST00000487747 PJVKQ0ZLH3 352 aa1.29□□□□□ -2.2
SMC4-219ENST00000487747 TMEM41BQ5BJD5 291 aa1.29□□□□□ -2.2
SMC4-219ENST00000487747 PRMT9Q6P2P2 845 aa1.29□□□□□ -2.2
SMC4-219ENST00000487747 ZNF493Q6ZR52 646 aa1.29□□□□□ -2.2
SMC4-219ENST00000487747 PIANPQ8IYJ0 282 aa1.29□□□□□ -2.2
SMC4-219ENST00000487747 ZNF664Q8N3J9 261 aa1.29□□□□□ -2.2
SMC4-219ENST00000487747 MREGQ8N565 214 aa1.29□□□□□ -2.2
SMC4-219ENST00000487747 TM4SF18Q96CE8 201 aa1.29□□□□□ -2.2
SMC4-219ENST00000487747 LY9Q9HBG7 655 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms