RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 FAM205BPQ63HN1 556 aa11.77□□□□□ -0.53
COL4A6-207ENST00000487645 GPR139Q6DWJ6 353 aa11.77□□□□□ -0.53
COL4A6-207ENST00000487645 ZNF474Q6S9Z5 364 aaPredicted RBP11.77□□□□□ -0.53
COL4A6-207ENST00000487645 KLHL17Q6TDP4 642 aa11.77□□□□□ -0.53
COL4A6-207ENST00000487645 THSD4Q6ZMP0 1018 aa11.77□□□□□ -0.53
COL4A6-207ENST00000487645 ABHD12BQ7Z5M8 362 aaPredicted RBP11.77□□□□□ -0.53
COL4A6-207ENST00000487645 LUZP2Q86TE4 346 aa11.77□□□□□ -0.53
COL4A6-207ENST00000487645 TMEM123Q8N131 208 aa11.77□□□□□ -0.53
COL4A6-207ENST00000487645 FANK1Q8TC84 345 aa11.77□□□□□ -0.53
COL4A6-207ENST00000487645 RNASE6Q93091 150 aaKnown RBP11.77□□□□□ -0.53
COL4A6-207ENST00000487645 SLC25A44Q96H78 314 aaPredicted RBP11.77□□□□□ -0.53
COL4A6-207ENST00000487645 SAMD8Q96LT4 415 aa11.77□□□□□ -0.53
COL4A6-207ENST00000487645 EMC6Q9BV81 110 aa11.77□□□□□ -0.53
COL4A6-207ENST00000487645 KATNB1Q9BVA0 655 aa11.77□□□□□ -0.53
COL4A6-207ENST00000487645 RBM24Q9BX46 236 aaKnown RBP11.77□□□□□ -0.53
COL4A6-207ENST00000487645 HDHD5Q9BXW7 423 aa11.77□□□□□ -0.53
COL4A6-207ENST00000487645 GABARAPL1Q9H0R8 117 aa11.77□□□□□ -0.53
COL4A6-207ENST00000487645 SLCO5A1Q9H2Y9 848 aa11.77□□□□□ -0.53
COL4A6-207ENST00000487645 DCLRE1BQ9H816 532 aa11.77□□□□□ -0.53
COL4A6-207ENST00000487645 GRHPRQ9UBQ7 328 aa11.77□□□□□ -0.53
COL4A6-207ENST00000487645 UPB1Q9UBR1 384 aa11.77□□□□□ -0.53
COL4A6-207ENST00000487645 REV1Q9UBZ9 1251 aa11.77□□□□□ -0.53
COL4A6-207ENST00000487645 ZNF346Q9UL40 294 aaKnown RBP11.77□□□□□ -0.53
COL4A6-207ENST00000487645 OAZ3Q9UMX2 235 aa11.77□□□□□ -0.53
COL4A6-207ENST00000487645 MAGED1Q9Y5V3 778 aaPredicted RBP11.77□□□□□ -0.53
COL4A6-207ENST00000487645 CDH10Q9Y6N8 788 aa11.77□□□□□ -0.53
COL4A6-207ENST00000487645 LRRK2Q5S007 2527 aa11.76□□□□□ -0.53
COL4A6-207ENST00000487645 NKX2-6A6NCS4 301 aa11.76□□□□□ -0.53
COL4A6-207ENST00000487645 A6NIZ1 184 aa11.76□□□□□ -0.53
COL4A6-207ENST00000487645 FAM90A27PA6NNH2 459 aa11.76□□□□□ -0.53
COL4A6-207ENST00000487645 ARPC3O15145 178 aa11.76□□□□□ -0.53
COL4A6-207ENST00000487645 AHCYL1O43865 530 aa11.76□□□□□ -0.53
COL4A6-207ENST00000487645 SERPINI2O75830 405 aa11.76□□□□□ -0.53
COL4A6-207ENST00000487645 TXNDC12O95881 172 aa11.76□□□□□ -0.53
COL4A6-207ENST00000487645 RNF224P0DH78 156 aa11.76□□□□□ -0.53
COL4A6-207ENST00000487645 ACADSP16219 412 aa11.76□□□□□ -0.53
COL4A6-207ENST00000487645 EDNRAP25101 427 aa11.76□□□□□ -0.53
COL4A6-207ENST00000487645 CD79BP40259 229 aa11.76□□□□□ -0.53
COL4A6-207ENST00000487645 DAPP51397 102 aa11.76□□□□□ -0.53
COL4A6-207ENST00000487645 RPS6KA3P51812 740 aa11.76□□□□□ -0.53
COL4A6-207ENST00000487645 RAP1BP61224 184 aa11.76□□□□□ -0.53
COL4A6-207ENST00000487645 RAP1AP62834 184 aa11.76□□□□□ -0.53
COL4A6-207ENST00000487645 ERVK-25P63136 954 aa11.76□□□□□ -0.53
COL4A6-207ENST00000487645 TSPO2Q5TGU0 170 aa11.76□□□□□ -0.53
COL4A6-207ENST00000487645 FAM122BQ7Z309 247 aa11.76□□□□□ -0.53
COL4A6-207ENST00000487645 IGFN1Q86VF2 1251 aa11.76□□□□□ -0.53
COL4A6-207ENST00000487645 KIF18BQ86Y91 864 aa11.76□□□□□ -0.53
COL4A6-207ENST00000487645 C20orf196Q8IYI0 205 aa11.76□□□□□ -0.53
COL4A6-207ENST00000487645 GABRG1Q8N1C3 465 aa11.76□□□□□ -0.53
COL4A6-207ENST00000487645 UBE2J2Q8N2K1 259 aa11.76□□□□□ -0.53
COL4A6-207ENST00000487645 ARIH2OSQ8N7S6 290 aa11.76□□□□□ -0.53
COL4A6-207ENST00000487645 ICA1LQ8NDH6 482 aa11.76□□□□□ -0.53
COL4A6-207ENST00000487645 OR52L1Q8NGH7 329 aa11.76□□□□□ -0.53
COL4A6-207ENST00000487645 ASB10Q8WXI3 467 aa11.76□□□□□ -0.53
COL4A6-207ENST00000487645 ZNF566Q969W8 418 aa11.76□□□□□ -0.53
COL4A6-207ENST00000487645 POLDIP3Q9BY77 421 aaKnown RBP11.76□□□□□ -0.53
COL4A6-207ENST00000487645 MRPL13Q9BYD1 178 aaKnown RBP11.76□□□□□ -0.53
COL4A6-207ENST00000487645 EGLN3Q9H6Z9 239 aa11.76□□□□□ -0.53
COL4A6-207ENST00000487645 SLC7A10Q9NS82 523 aa11.76□□□□□ -0.53
COL4A6-207ENST00000487645 ASB6Q9NWX5 421 aa11.76□□□□□ -0.53
COL4A6-207ENST00000487645 KIF17Q9P2E2 1029 aa11.76□□□□□ -0.53
COL4A6-207ENST00000487645 MALT1Q9UDY8 824 aa11.76□□□□□ -0.53
COL4A6-207ENST00000487645 PRSS50Q9UI38 385 aa11.76□□□□□ -0.53
COL4A6-207ENST00000487645 POFUT2Q9Y2G5 429 aa11.76□□□□□ -0.53
COL4A6-207ENST00000487645 UTP20O75691 2785 aaKnown RBP11.75□□□□□ -0.53
COL4A6-207ENST00000487645 RPL36A-HNRNPH2H7BZ11 118 aa11.75□□□□□ -0.53
COL4A6-207ENST00000487645 TRMUO75648 421 aaKnown RBP11.75□□□□□ -0.53
COL4A6-207ENST00000487645 KRT33AO76009 404 aa11.75□□□□□ -0.53
COL4A6-207ENST00000487645 IGHG1P01857 330 aa11.75□□□□□ -0.53
COL4A6-207ENST00000487645 TP53P04637 393 aaPredicted RBP11.75□□□□□ -0.53
COL4A6-207ENST00000487645 OSMP13725 252 aa11.75□□□□□ -0.53
COL4A6-207ENST00000487645 ANPEPP15144 967 aa11.75□□□□□ -0.53
COL4A6-207ENST00000487645 SDHAP31040 664 aa11.75□□□□□ -0.53
COL4A6-207ENST00000487645 ACVR1BP36896 505 aa11.75□□□□□ -0.53
COL4A6-207ENST00000487645 FAPQ12884 760 aa11.75□□□□□ -0.53
COL4A6-207ENST00000487645 ITGADQ13349 1161 aa11.75□□□□□ -0.53
COL4A6-207ENST00000487645 CAMK2DQ13557 499 aa11.75□□□□□ -0.53
COL4A6-207ENST00000487645 HIST3H3Q16695 136 aa11.75□□□□□ -0.53
COL4A6-207ENST00000487645 KDM4DQ6B0I6 523 aa11.75□□□□□ -0.53
COL4A6-207ENST00000487645 PARP8Q8N3A8 854 aa11.75□□□□□ -0.53
COL4A6-207ENST00000487645 GPR137CQ8N3F9 429 aa11.75□□□□□ -0.53
COL4A6-207ENST00000487645 OR6N1Q8NGY5 312 aa11.75□□□□□ -0.53
COL4A6-207ENST00000487645 ZNF519Q8TB69 540 aa11.75□□□□□ -0.53
COL4A6-207ENST00000487645 FNDC8Q8TC99 324 aa11.75□□□□□ -0.53
COL4A6-207ENST00000487645 TMEM54Q969K7 222 aa11.75□□□□□ -0.53
COL4A6-207ENST00000487645 TSPAN32Q96QS1 320 aa11.75□□□□□ -0.53
COL4A6-207ENST00000487645 RBM4BQ9BQ04 359 aaKnown RBP11.75□□□□□ -0.53
COL4A6-207ENST00000487645 USB1Q9BQ65 265 aaKnown RBP11.75□□□□□ -0.53
COL4A6-207ENST00000487645 C9orf16Q9BUW7 83 aa11.75□□□□□ -0.53
COL4A6-207ENST00000487645 IFT27Q9BW83 186 aa11.75□□□□□ -0.53
COL4A6-207ENST00000487645 RBM4Q9BWF3 364 aaKnown RBP11.75□□□□□ -0.53
COL4A6-207ENST00000487645 OR10A4Q9H209 315 aa11.75□□□□□ -0.53
COL4A6-207ENST00000487645 SMURF2Q9HAU4 748 aa11.75□□□□□ -0.53
COL4A6-207ENST00000487645 B3GAT2Q9NPZ5 323 aa11.75□□□□□ -0.53
COL4A6-207ENST00000487645 PAPOLBQ9NRJ5 636 aaKnown RBP11.75□□□□□ -0.53
COL4A6-207ENST00000487645 GALNT8Q9NY28 637 aa11.75□□□□□ -0.53
COL4A6-207ENST00000487645 GLTPQ9NZD2 209 aa11.75□□□□□ -0.53
COL4A6-207ENST00000487645 IL20RAQ9UHF4 553 aa11.75□□□□□ -0.53
COL4A6-207ENST00000487645 BAIAP2Q9UQB8 552 aa11.75□□□□□ -0.53
COL4A6-207ENST00000487645 IER3IP1Q9Y5U9 82 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms