RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 IFI6P09912 130 aa4.8□□□□□ -1.64
COL4A3-206ENST00000487633 CD33P20138 364 aa4.8□□□□□ -1.64
COL4A3-206ENST00000487633 ATP6V1C1P21283 382 aa4.8□□□□□ -1.64
COL4A3-206ENST00000487633 GABRA5P31644 462 aa4.8□□□□□ -1.64
COL4A3-206ENST00000487633 WNT5AP41221 380 aa4.8□□□□□ -1.64
COL4A3-206ENST00000487633 ERFP50548 548 aa4.8□□□□□ -1.64
COL4A3-206ENST00000487633 GALK2Q01415 458 aa4.8□□□□□ -1.64
COL4A3-206ENST00000487633 TEKQ02763 1124 aa4.8□□□□□ -1.64
COL4A3-206ENST00000487633 CLCQ05315 142 aa4.8□□□□□ -1.64
COL4A3-206ENST00000487633 C2orf54Q08AI8 447 aa4.8□□□□□ -1.64
COL4A3-206ENST00000487633 RBBP4Q09028 425 aa4.8□□□□□ -1.64
COL4A3-206ENST00000487633 BST1Q10588 318 aa4.8□□□□□ -1.64
COL4A3-206ENST00000487633 TP53BP2Q13625 1128 aa4.8□□□□□ -1.64
COL4A3-206ENST00000487633 LARS2Q15031 903 aaKnown RBP4.8□□□□□ -1.64
COL4A3-206ENST00000487633 ARHGAP11BQ3KRB8 267 aa4.8□□□□□ -1.64
COL4A3-206ENST00000487633 TMEM155Q4W5P6 130 aa4.8□□□□□ -1.64
COL4A3-206ENST00000487633 SPIN4Q56A73 249 aa4.8□□□□□ -1.64
COL4A3-206ENST00000487633 ESCO2Q56NI9 601 aa4.8□□□□□ -1.64
COL4A3-206ENST00000487633 SPDYAQ5MJ70 313 aa4.8□□□□□ -1.64
COL4A3-206ENST00000487633 THEM4Q5T1C6 240 aa4.8□□□□□ -1.64
COL4A3-206ENST00000487633 MROH9Q5TGP6 573 aa4.8□□□□□ -1.64
COL4A3-206ENST00000487633 GPR157Q5UAW9 335 aa4.8□□□□□ -1.64
COL4A3-206ENST00000487633 TMEM225Q6GV28 225 aa4.8□□□□□ -1.64
COL4A3-206ENST00000487633 TYW3Q6IPR3 259 aaKnown RBP4.8□□□□□ -1.64
COL4A3-206ENST00000487633 NHLRC1Q6VVB1 395 aa4.8□□□□□ -1.64
COL4A3-206ENST00000487633 WDR88Q6ZMY6 472 aa4.8□□□□□ -1.64
COL4A3-206ENST00000487633 ZNF813Q6ZN06 617 aa4.8□□□□□ -1.64
COL4A3-206ENST00000487633 Q6ZS46 218 aa4.8□□□□□ -1.64
COL4A3-206ENST00000487633 ABHD12BQ7Z5M8 362 aaPredicted RBP4.8□□□□□ -1.64
COL4A3-206ENST00000487633 CTAGE3PQ8IX95 158 aa4.8□□□□□ -1.64
COL4A3-206ENST00000487633 ZNF283Q8N7M2 679 aa4.8□□□□□ -1.64
COL4A3-206ENST00000487633 TBC1D15Q8TC07 691 aa4.8□□□□□ -1.64
COL4A3-206ENST00000487633 METTL6Q8TCB7 284 aa4.8□□□□□ -1.64
COL4A3-206ENST00000487633 SNX33Q8WV41 574 aa4.8□□□□□ -1.64
COL4A3-206ENST00000487633 LHX4Q969G2 390 aa4.8□□□□□ -1.64
COL4A3-206ENST00000487633 TXNDC15Q96J42 360 aa4.8□□□□□ -1.64
COL4A3-206ENST00000487633 ZNF317Q96PQ6 595 aaPredicted RBP4.8□□□□□ -1.64
COL4A3-206ENST00000487633 OR2M2Q96R28 347 aa4.8□□□□□ -1.64
COL4A3-206ENST00000487633 PTDSS2Q9BVG9 487 aa4.8□□□□□ -1.64
COL4A3-206ENST00000487633 TRIM31Q9BZY9 425 aa4.8□□□□□ -1.64
COL4A3-206ENST00000487633 POFUT1Q9H488 388 aa4.8□□□□□ -1.64
COL4A3-206ENST00000487633 ZNRD1Q9P1U0 126 aa4.8□□□□□ -1.64
COL4A3-206ENST00000487633 CTSZQ9UBR2 303 aa4.8□□□□□ -1.64
COL4A3-206ENST00000487633 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.8□□□□□ -1.64
COL4A3-206ENST00000487633 SLC7A8Q9UHI5 535 aa4.8□□□□□ -1.64
COL4A3-206ENST00000487633 VPREB3Q9UKI3 123 aa4.8□□□□□ -1.64
COL4A3-206ENST00000487633 CCL27Q9Y4X3 112 aa4.8□□□□□ -1.64
COL4A3-206ENST00000487633 LSM4Q9Y4Z0 139 aaKnown RBP4.8□□□□□ -1.64
COL4A3-206ENST00000487633 TNPO3Q9Y5L0 923 aaKnown RBP4.8□□□□□ -1.64
COL4A3-206ENST00000487633 USH1CQ9Y6N9 552 aa4.8□□□□□ -1.64
COL4A3-206ENST00000487633 MUC4Q99102 2169 aa4.8□□□□□ -1.64
COL4A3-206ENST00000487633 IGHV1-69DA0A0B4J2H0 117 aa4.79□□□□□ -1.64
COL4A3-206ENST00000487633 FTCDNL1E5RQL4 147 aa4.79□□□□□ -1.64
COL4A3-206ENST00000487633 ZNF208O43345 1280 aa4.79□□□□□ -1.64
COL4A3-206ENST00000487633 NPIPB7O75200 414 aa4.79□□□□□ -1.64
COL4A3-206ENST00000487633 SEC31AO94979 1220 aaKnown RBP4.79□□□□□ -1.64
COL4A3-206ENST00000487633 CYB5R3P00387 301 aaPredicted RBP4.79□□□□□ -1.64
COL4A3-206ENST00000487633 OTCP00480 354 aa4.79□□□□□ -1.64
COL4A3-206ENST00000487633 IGHV1-69P01742 117 aa4.79□□□□□ -1.64
COL4A3-206ENST00000487633 CHRM2P08172 466 aa4.79□□□□□ -1.64
COL4A3-206ENST00000487633 PNMTP11086 282 aa4.79□□□□□ -1.64
COL4A3-206ENST00000487633 LYL1P12980 280 aa4.79□□□□□ -1.64
COL4A3-206ENST00000487633 HSD3B1P14060 373 aa4.79□□□□□ -1.64
COL4A3-206ENST00000487633 SNRPBP14678 240 aaKnown RBP4.79□□□□□ -1.64
COL4A3-206ENST00000487633 SDC1P18827 310 aa4.79□□□□□ -1.64
COL4A3-206ENST00000487633 CBLP22681 906 aa4.79□□□□□ -1.64
COL4A3-206ENST00000487633 HSD3B2P26439 372 aa4.79□□□□□ -1.64
COL4A3-206ENST00000487633 CRABP2P29373 138 aa4.79□□□□□ -1.64
COL4A3-206ENST00000487633 SPRP35270 261 aaPredicted RBP4.79□□□□□ -1.64
COL4A3-206ENST00000487633 PMELP40967 661 aa4.79□□□□□ -1.64
COL4A3-206ENST00000487633 CLK1P49759 484 aaKnown RBP4.79□□□□□ -1.64
COL4A3-206ENST00000487633 SH3BGRP55822 239 aaPredicted RBP4.79□□□□□ -1.64
COL4A3-206ENST00000487633 UCP2P55851 309 aa4.79□□□□□ -1.64
COL4A3-206ENST00000487633 ARL4CP56559 192 aa4.79□□□□□ -1.64
COL4A3-206ENST00000487633 RPS23P62266 143 aaKnown RBP4.79□□□□□ -1.64
COL4A3-206ENST00000487633 EGR4Q05215 589 aa4.79□□□□□ -1.64
COL4A3-206ENST00000487633 PDE7AQ13946 482 aa4.79□□□□□ -1.64
COL4A3-206ENST00000487633 LY6EQ16553 131 aa4.79□□□□□ -1.64
COL4A3-206ENST00000487633 GRTP1Q5TC63 336 aa4.79□□□□□ -1.64
COL4A3-206ENST00000487633 AP1ARQ63HQ0 302 aa4.79□□□□□ -1.64
COL4A3-206ENST00000487633 ZCCHC12Q6PEW1 402 aa4.79□□□□□ -1.64
COL4A3-206ENST00000487633 CRIP3Q6Q6R5 217 aa4.79□□□□□ -1.64
COL4A3-206ENST00000487633 BTNL3Q6UXE8 466 aa4.79□□□□□ -1.64
COL4A3-206ENST00000487633 GDPGP1Q6ZNW5 385 aa4.79□□□□□ -1.64
COL4A3-206ENST00000487633 CMIPQ8IY22 773 aa4.79□□□□□ -1.64
COL4A3-206ENST00000487633 KLHL36Q8N4N3 616 aa4.79□□□□□ -1.64
COL4A3-206ENST00000487633 SPICQ8N5J4 248 aa4.79□□□□□ -1.64
COL4A3-206ENST00000487633 OR7A2PQ8NGA2 310 aa4.79□□□□□ -1.64
COL4A3-206ENST00000487633 OR1J1Q8NGS3 322 aa4.79□□□□□ -1.64
COL4A3-206ENST00000487633 OR2T11Q8NH01 316 aa4.79□□□□□ -1.64
COL4A3-206ENST00000487633 ZNF519Q8TB69 540 aa4.79□□□□□ -1.64
COL4A3-206ENST00000487633 ITLN1Q8WWA0 313 aa4.79□□□□□ -1.64
COL4A3-206ENST00000487633 DDIT4LQ96D03 193 aa4.79□□□□□ -1.64
COL4A3-206ENST00000487633 TSSK3Q96PN8 268 aa4.79□□□□□ -1.64
COL4A3-206ENST00000487633 TMEM237Q96Q45 408 aa4.79□□□□□ -1.64
COL4A3-206ENST00000487633 SH3GL3Q99963 347 aa4.79□□□□□ -1.64
COL4A3-206ENST00000487633 TMEM246Q9BRR3 403 aa4.79□□□□□ -1.64
COL4A3-206ENST00000487633 C1QTNF3Q9BXJ4 246 aa4.79□□□□□ -1.64
COL4A3-206ENST00000487633 ACTRT3Q9BYD9 372 aa4.79□□□□□ -1.64
COL4A3-206ENST00000487633 ZNF350Q9GZX5 532 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms