RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 DUSP19Q8WTR2 217 aa5.54□□□□□ -1.52
RTFDC1-209ENST00000487211 TMEM18Q96B42 140 aa5.54□□□□□ -1.52
RTFDC1-209ENST00000487211 ZNF524Q96C55 264 aa5.54□□□□□ -1.52
RTFDC1-209ENST00000487211 ROPN1LQ96C74 230 aa5.54□□□□□ -1.52
RTFDC1-209ENST00000487211 SLC35G5Q96KT7 338 aa5.54□□□□□ -1.52
RTFDC1-209ENST00000487211 GPR137Q96N19 417 aa5.54□□□□□ -1.52
RTFDC1-209ENST00000487211 NPFFR1Q9GZQ6 430 aa5.54□□□□□ -1.52
RTFDC1-209ENST00000487211 UBQLN3Q9H347 655 aa5.54□□□□□ -1.52
RTFDC1-209ENST00000487211 IKZF5Q9H5V7 419 aa5.54□□□□□ -1.52
RTFDC1-209ENST00000487211 METTL7AQ9H8H3 244 aa5.54□□□□□ -1.52
RTFDC1-209ENST00000487211 ZDHHC11Q9H8X9 412 aa5.54□□□□□ -1.52
RTFDC1-209ENST00000487211 AGPAT4Q9NRZ5 378 aa5.54□□□□□ -1.52
RTFDC1-209ENST00000487211 MED11Q9P086 117 aa5.54□□□□□ -1.52
RTFDC1-209ENST00000487211 LEF1Q9UJU2 399 aaPredicted RBP5.54□□□□□ -1.52
RTFDC1-209ENST00000487211 FBXL2Q9UKC9 423 aa5.54□□□□□ -1.52
RTFDC1-209ENST00000487211 MRTO4Q9UKD2 239 aaKnown RBP5.54□□□□□ -1.52
RTFDC1-209ENST00000487211 ADAM18Q9Y3Q7 739 aa5.54□□□□□ -1.52
RTFDC1-209ENST00000487211 LSM4Q9Y4Z0 139 aaKnown RBP5.54□□□□□ -1.52
RTFDC1-209ENST00000487211 GMEB1Q9Y692 573 aa5.54□□□□□ -1.52
RTFDC1-209ENST00000487211 A3GALT2U3KPV4 340 aa5.54□□□□□ -1.52
RTFDC1-209ENST00000487211 POLEQ07864 2286 aa5.54□□□□□ -1.52
RTFDC1-209ENST00000487211 PCNX3Q9H6A9 2034 aa5.53□□□□□ -1.52
RTFDC1-209ENST00000487211 A0A1B0GTH9 108 aa5.53□□□□□ -1.52
RTFDC1-209ENST00000487211 GAGE12JA6NER3 117 aa5.53□□□□□ -1.52
RTFDC1-209ENST00000487211 ANKUB1A6NFN9 424 aa5.53□□□□□ -1.52
RTFDC1-209ENST00000487211 PTGES3LE9PB15 166 aa5.53□□□□□ -1.52
RTFDC1-209ENST00000487211 TFECO14948 347 aaPredicted RBP5.53□□□□□ -1.52
RTFDC1-209ENST00000487211 SCO2O43819 266 aa5.53□□□□□ -1.52
RTFDC1-209ENST00000487211 CCDC22O60826 627 aa5.53□□□□□ -1.52
RTFDC1-209ENST00000487211 BCAS1O75363 584 aaPredicted RBP5.53□□□□□ -1.52
RTFDC1-209ENST00000487211 UGT2B17O75795 530 aa5.53□□□□□ -1.52
RTFDC1-209ENST00000487211 CBR3O75828 277 aa5.53□□□□□ -1.52
RTFDC1-209ENST00000487211 H6PDO95479 791 aa5.53□□□□□ -1.52
RTFDC1-209ENST00000487211 FAM107AO95990 144 aa5.53□□□□□ -1.52
RTFDC1-209ENST00000487211 NGFRP08138 427 aa5.53□□□□□ -1.52
RTFDC1-209ENST00000487211 KRT16P08779 473 aa5.53□□□□□ -1.52
RTFDC1-209ENST00000487211 COX4I1P13073 169 aa5.53□□□□□ -1.52
RTFDC1-209ENST00000487211 PRF1P14222 555 aa5.53□□□□□ -1.52
RTFDC1-209ENST00000487211 GPX2P18283 190 aa5.53□□□□□ -1.52
RTFDC1-209ENST00000487211 LCN1P31025 176 aa5.53□□□□□ -1.52
RTFDC1-209ENST00000487211 CDAP32320 146 aa5.53□□□□□ -1.52
RTFDC1-209ENST00000487211 DCTDP32321 178 aa5.53□□□□□ -1.52
RTFDC1-209ENST00000487211 GZMMP51124 257 aa5.53□□□□□ -1.52
RTFDC1-209ENST00000487211 ATP12AP54707 1039 aa5.53□□□□□ -1.52
RTFDC1-209ENST00000487211 PSMD4P55036 377 aaKnown RBP5.53□□□□□ -1.52
RTFDC1-209ENST00000487211 RPP38P78345 283 aaKnown RBP5.53□□□□□ -1.52
RTFDC1-209ENST00000487211 SSBP2P81877 361 aaPredicted RBP5.53□□□□□ -1.52
RTFDC1-209ENST00000487211 ITGADQ13349 1161 aa5.53□□□□□ -1.52
RTFDC1-209ENST00000487211 CYLC2Q14093 348 aaPredicted RBP5.53□□□□□ -1.52
RTFDC1-209ENST00000487211 CAPRIN1Q14444 709 aaKnown RBP5.53□□□□□ -1.52
RTFDC1-209ENST00000487211 CD226Q15762 336 aa5.53□□□□□ -1.52
RTFDC1-209ENST00000487211 ZNF141Q15928 474 aa5.53□□□□□ -1.52
RTFDC1-209ENST00000487211 EIPR1Q53HC9 387 aa5.53□□□□□ -1.52
RTFDC1-209ENST00000487211 ESCO2Q56NI9 601 aa5.53□□□□□ -1.52
RTFDC1-209ENST00000487211 Q5PR19 223 aa5.53□□□□□ -1.52
RTFDC1-209ENST00000487211 PXDC1Q5TGL8 231 aa5.53□□□□□ -1.52
RTFDC1-209ENST00000487211 TYW3Q6IPR3 259 aaKnown RBP5.53□□□□□ -1.52
RTFDC1-209ENST00000487211 NANOGP8Q6NSW7 305 aa5.53□□□□□ -1.52
RTFDC1-209ENST00000487211 CBLN3Q6UW01 205 aa5.53□□□□□ -1.52
RTFDC1-209ENST00000487211 FRRS1Q6ZNA5 592 aa5.53□□□□□ -1.52
RTFDC1-209ENST00000487211 HMGN2P46Q86SG4 172 aa5.53□□□□□ -1.52
RTFDC1-209ENST00000487211 SLC22A16Q86VW1 577 aa5.53□□□□□ -1.52
RTFDC1-209ENST00000487211 SNX32Q86XE0 403 aa5.53□□□□□ -1.52
RTFDC1-209ENST00000487211 PLCZ1Q86YW0 608 aa5.53□□□□□ -1.52
RTFDC1-209ENST00000487211 FADS6Q8N9I5 356 aa5.53□□□□□ -1.52
RTFDC1-209ENST00000487211 GATSQ8NAP1 163 aa5.53□□□□□ -1.52
RTFDC1-209ENST00000487211 ST6GALNAC3Q8NDV1 305 aa5.53□□□□□ -1.52
RTFDC1-209ENST00000487211 SLC38A5Q8WUX1 472 aa5.53□□□□□ -1.52
RTFDC1-209ENST00000487211 MAL2Q969L2 176 aa5.53□□□□□ -1.52
RTFDC1-209ENST00000487211 LRRC58Q96CX6 371 aa5.53□□□□□ -1.52
RTFDC1-209ENST00000487211 ANKRD27Q96NW4 1050 aa5.53□□□□□ -1.52
RTFDC1-209ENST00000487211 CGREF1Q99674 301 aa5.53□□□□□ -1.52
RTFDC1-209ENST00000487211 OSBPL11Q9BXB4 747 aa5.53□□□□□ -1.52
RTFDC1-209ENST00000487211 ZNF350Q9GZX5 532 aa5.53□□□□□ -1.52
RTFDC1-209ENST00000487211 SLC38A1Q9H2H9 487 aa5.53□□□□□ -1.52
RTFDC1-209ENST00000487211 DSN1Q9H410 356 aa5.53□□□□□ -1.52
RTFDC1-209ENST00000487211 NANOGQ9H9S0 305 aa5.53□□□□□ -1.52
RTFDC1-209ENST00000487211 ACKR4Q9NPB9 350 aa5.53□□□□□ -1.52
RTFDC1-209ENST00000487211 UBQLN4Q9NRR5 601 aa5.53□□□□□ -1.52
RTFDC1-209ENST00000487211 EXD2Q9NVH0 621 aa5.53□□□□□ -1.52
RTFDC1-209ENST00000487211 KLRF1Q9NZS2 232 aa5.53□□□□□ -1.52
RTFDC1-209ENST00000487211 SEC14L3Q9UDX4 400 aa5.53□□□□□ -1.52
RTFDC1-209ENST00000487211 BOKQ9UMX3 212 aaPredicted RBP5.53□□□□□ -1.52
RTFDC1-209ENST00000487211 ZNF835Q9Y2P0 537 aa5.53□□□□□ -1.52
RTFDC1-209ENST00000487211 WIF1Q9Y5W5 379 aa5.53□□□□□ -1.52
RTFDC1-209ENST00000487211 LIPGQ9Y5X9 500 aa5.53□□□□□ -1.52
RTFDC1-209ENST00000487211 ZGRF1Q86YA3 2104 aa5.53□□□□□ -1.52
RTFDC1-209ENST00000487211 CUBNO60494 3623 aa5.53□□□□□ -1.52
RTFDC1-209ENST00000487211 TLN2Q9Y4G6 2542 aa5.52□□□□□ -1.53
RTFDC1-209ENST00000487211 ZNF407Q9C0G0 2248 aa5.52□□□□□ -1.53
RTFDC1-209ENST00000487211 MED12Q93074 2177 aa5.52□□□□□ -1.53
RTFDC1-209ENST00000487211 A0A1W2PQD3 144 aa5.52□□□□□ -1.53
RTFDC1-209ENST00000487211 CLDN24A6NM45 220 aa5.52□□□□□ -1.53
RTFDC1-209ENST00000487211 FXYD1O00168 92 aa5.52□□□□□ -1.53
RTFDC1-209ENST00000487211 MRASO14807 208 aa5.52□□□□□ -1.53
RTFDC1-209ENST00000487211 ANGPT2O15123 496 aa5.52□□□□□ -1.53
RTFDC1-209ENST00000487211 SLC22A2O15244 555 aa5.52□□□□□ -1.53
RTFDC1-209ENST00000487211 GMFGO60234 142 aa5.52□□□□□ -1.53
RTFDC1-209ENST00000487211 CDC40O60508 579 aaKnown RBP eCLIP5.52□□□□□ -1.53
RTFDC1-209ENST00000487211 STX11O75558 287 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms