RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 ECHDC2Q86YB7 292 aa2.64□□□□□ -1.99
LTN1-206ENST00000486427 TRMT10AQ8TBZ6 339 aaKnown RBP2.64□□□□□ -1.99
LTN1-206ENST00000486427 SMARCD2Q92925 531 aa2.64□□□□□ -1.99
LTN1-206ENST00000486427 RMI2Q96E14 147 aa2.64□□□□□ -1.99
LTN1-206ENST00000486427 DTNBP1Q96EV8 351 aa2.64□□□□□ -1.99
LTN1-206ENST00000486427 SENP8Q96LD8 212 aa2.64□□□□□ -1.99
LTN1-206ENST00000486427 CHAC1Q9BUX1 264 aa2.64□□□□□ -1.99
LTN1-206ENST00000486427 RPP21Q9H633 154 aaKnown RBP2.64□□□□□ -1.99
LTN1-206ENST00000486427 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.64□□□□□ -1.99
LTN1-206ENST00000486427 SMOXQ9NWM0 555 aa2.64□□□□□ -1.99
LTN1-206ENST00000486427 GGA2Q9UJY4 613 aa2.64□□□□□ -1.99
LTN1-206ENST00000486427 KCNIP3Q9Y2W7 256 aa2.64□□□□□ -1.99
LTN1-206ENST00000486427 RPAP1Q9BWH6 1393 aaPredicted RBP2.63□□□□□ -1.99
LTN1-206ENST00000486427 A0A1W2PP18 115 aa2.63□□□□□ -1.99
LTN1-206ENST00000486427 OR5B21A6NL26 309 aa2.63□□□□□ -1.99
LTN1-206ENST00000486427 INS-IGF2F8WCM5 200 aa2.63□□□□□ -1.99
LTN1-206ENST00000486427 C6orf47O95873 294 aa2.63□□□□□ -1.99
LTN1-206ENST00000486427 UGT2B4P06133 528 aa2.63□□□□□ -1.99
LTN1-206ENST00000486427 ERVK-25P63136 954 aa2.63□□□□□ -1.99
LTN1-206ENST00000486427 AQP6Q13520 282 aa2.63□□□□□ -1.99
LTN1-206ENST00000486427 ZNF880Q6PDB4 577 aa2.63□□□□□ -1.99
LTN1-206ENST00000486427 PLA2G4DQ86XP0 818 aa2.63□□□□□ -1.99
LTN1-206ENST00000486427 MYOCDQ8IZQ8 938 aa2.63□□□□□ -1.99
LTN1-206ENST00000486427 ARRDC1Q8N5I2 433 aa2.63□□□□□ -1.99
LTN1-206ENST00000486427 CXorf40BQ96DE9 158 aa2.63□□□□□ -1.99
LTN1-206ENST00000486427 TBC1D31Q96DN5 1066 aa2.63□□□□□ -1.99
LTN1-206ENST00000486427 SLC38A2Q96QD8 506 aa2.63□□□□□ -1.99
LTN1-206ENST00000486427 GABARAPL3Q9BY60 117 aa2.63□□□□□ -1.99
LTN1-206ENST00000486427 RAB33BQ9H082 229 aa2.63□□□□□ -1.99
LTN1-206ENST00000486427 CD84Q9UIB8 345 aa2.63□□□□□ -1.99
LTN1-206ENST00000486427 WDR62O43379 1518 aa2.63□□□□□ -1.99
LTN1-206ENST00000486427 PNPLA6Q8IY17 1366 aa2.62□□□□□ -1.99
LTN1-206ENST00000486427 CEMIPQ8WUJ3 1361 aa2.62□□□□□ -1.99
LTN1-206ENST00000486427 CCDC182A6NF36 153 aa2.62□□□□□ -1.99
LTN1-206ENST00000486427 H0YHG0 523 aa2.62□□□□□ -1.99
LTN1-206ENST00000486427 ANGPT2O15123 496 aa2.62□□□□□ -1.99
LTN1-206ENST00000486427 ARPC3O15145 178 aa2.62□□□□□ -1.99
LTN1-206ENST00000486427 HSMCR30P0CW71 290 aa2.62□□□□□ -1.99
LTN1-206ENST00000486427 SMIM10L1P0DMW3 83 aa2.62□□□□□ -1.99
LTN1-206ENST00000486427 PRPS2P11908 318 aa2.62□□□□□ -1.99
LTN1-206ENST00000486427 GDI1P31150 447 aa2.62□□□□□ -1.99
LTN1-206ENST00000486427 CCR1P32246 355 aa2.62□□□□□ -1.99
LTN1-206ENST00000486427 OPRD1P41143 372 aa2.62□□□□□ -1.99
LTN1-206ENST00000486427 NPBWR2P48146 333 aa2.62□□□□□ -1.99
LTN1-206ENST00000486427 SLC7A9P82251 487 aa2.62□□□□□ -1.99
LTN1-206ENST00000486427 SFT2D3Q587I9 215 aa2.62□□□□□ -1.99
LTN1-206ENST00000486427 NCCRP1Q6ZVX7 275 aaPredicted RBP2.62□□□□□ -1.99
LTN1-206ENST00000486427 UBALD2Q8IYN6 164 aa2.62□□□□□ -1.99
LTN1-206ENST00000486427 STPG2Q8N412 459 aa2.62□□□□□ -1.99
LTN1-206ENST00000486427 MFSD9Q8NBP5 474 aa2.62□□□□□ -1.99
LTN1-206ENST00000486427 ESR2Q92731 530 aa2.62□□□□□ -1.99
LTN1-206ENST00000486427 SMIM10Q96HG1 83 aa2.62□□□□□ -1.99
LTN1-206ENST00000486427 TMOD2Q9NZR1 351 aa2.62□□□□□ -1.99
LTN1-206ENST00000486427 EPS15L1Q9UBC2 864 aa2.62□□□□□ -1.99
LTN1-206ENST00000486427 PACSIN2Q9UNF0 486 aaPredicted RBP2.62□□□□□ -1.99
LTN1-206ENST00000486427 PIKFYVEQ9Y2I7 2098 aa2.62□□□□□ -1.99
LTN1-206ENST00000486427 PCM1Q15154 2024 aa2.61□□□□□ -1.99
LTN1-206ENST00000486427 TRAV40A0A0B4J280 105 aa2.61□□□□□ -1.99
LTN1-206ENST00000486427 A0A1B0GVI7 797 aa2.61□□□□□ -1.99
LTN1-206ENST00000486427 CIB4A0PJX0 185 aa2.61□□□□□ -1.99
LTN1-206ENST00000486427 PEX11AO75192 247 aa2.61□□□□□ -1.99
LTN1-206ENST00000486427 UPK3AO75631 287 aa2.61□□□□□ -1.99
LTN1-206ENST00000486427 ADRA2AP08913 450 aa2.61□□□□□ -1.99
LTN1-206ENST00000486427 HSPA5P11021 654 aaKnown RBP2.61□□□□□ -1.99
LTN1-206ENST00000486427 PSMC3P17980 439 aa2.61□□□□□ -1.99
LTN1-206ENST00000486427 DUSP3P51452 185 aaPredicted RBP2.61□□□□□ -1.99
LTN1-206ENST00000486427 CACNG7P62955 275 aa2.61□□□□□ -1.99
LTN1-206ENST00000486427 RPS21P63220 83 aaKnown RBP2.61□□□□□ -1.99
LTN1-206ENST00000486427 NCBP1Q09161 790 aaKnown RBP2.61□□□□□ -1.99
LTN1-206ENST00000486427 ELP6Q0PNE2 266 aa2.61□□□□□ -1.99
LTN1-206ENST00000486427 SYCNQ0VAF6 134 aa2.61□□□□□ -1.99
LTN1-206ENST00000486427 FBXW9Q5XUX1 488 aa2.61□□□□□ -1.99
LTN1-206ENST00000486427 SHISA6Q6ZSJ9 500 aa2.61□□□□□ -1.99
LTN1-206ENST00000486427 H2AFVQ71UI9 128 aa2.61□□□□□ -1.99
LTN1-206ENST00000486427 TRIM69Q86WT6 500 aa2.61□□□□□ -1.99
LTN1-206ENST00000486427 OR10G4Q8NGN3 311 aa2.61□□□□□ -1.99
LTN1-206ENST00000486427 ZNF461Q8TAF7 563 aa2.61□□□□□ -1.99
LTN1-206ENST00000486427 PYROXD1Q8WU10 500 aa2.61□□□□□ -1.99
LTN1-206ENST00000486427 GEMIN6Q8WXD5 167 aaKnown RBP2.61□□□□□ -1.99
LTN1-206ENST00000486427 SGK3Q96BR1 496 aa2.61□□□□□ -1.99
LTN1-206ENST00000486427 PDXPQ96GD0 296 aa2.61□□□□□ -1.99
LTN1-206ENST00000486427 TSSK3Q96PN8 268 aa2.61□□□□□ -1.99
LTN1-206ENST00000486427 ADAP2Q9NPF8 381 aa2.61□□□□□ -1.99
LTN1-206ENST00000486427 ZNF355PQ9NSJ1 428 aa2.61□□□□□ -1.99
LTN1-206ENST00000486427 EXD2Q9NVH0 621 aa2.61□□□□□ -1.99
LTN1-206ENST00000486427 ATP6V0A2Q9Y487 856 aa2.61□□□□□ -1.99
LTN1-206ENST00000486427 TOM1O60784 492 aa2.6□□□□□ -1.99
LTN1-206ENST00000486427 NOL3O60936 208 aaKnown RBP2.6□□□□□ -1.99
LTN1-206ENST00000486427 SRP72O76094 671 aaKnown RBP2.6□□□□□ -1.99
LTN1-206ENST00000486427 RCBTB2O95199 551 aa2.6□□□□□ -1.99
LTN1-206ENST00000486427 GPR6P46095 362 aaPredicted RBP2.6□□□□□ -1.99
LTN1-206ENST00000486427 IRX3P78415 501 aaPredicted RBP2.6□□□□□ -1.99
LTN1-206ENST00000486427 CDK16Q00536 496 aa2.6□□□□□ -1.99
LTN1-206ENST00000486427 KLHL30Q0D2K2 578 aa2.6□□□□□ -1.99
LTN1-206ENST00000486427 KLHL38Q2WGJ6 581 aa2.6□□□□□ -1.99
LTN1-206ENST00000486427 FILIP1LQ4L180 1135 aa2.6□□□□□ -1.99
LTN1-206ENST00000486427 XKR4Q5GH76 650 aa2.6□□□□□ -1.99
LTN1-206ENST00000486427 OR4F3Q6IEY1 312 aa2.6□□□□□ -1.99
LTN1-206ENST00000486427 UTS2BQ765I0 119 aa2.6□□□□□ -1.99
LTN1-206ENST00000486427 VSTM4Q8IW00 320 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms