RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 RPL27P61353 136 aaKnown RBP10.08□□□□□ -0.8
NUP50-216ENST00000486184 RAP1AP62834 184 aa10.08□□□□□ -0.8
NUP50-216ENST00000486184 FAPQ12884 760 aa10.08□□□□□ -0.8
NUP50-216ENST00000486184 COX10Q12887 443 aa10.08□□□□□ -0.8
NUP50-216ENST00000486184 CAMK2DQ13557 499 aa10.08□□□□□ -0.8
NUP50-216ENST00000486184 ACKR1Q16570 336 aa10.08□□□□□ -0.8
NUP50-216ENST00000486184 FAM205BPQ63HN1 556 aa10.08□□□□□ -0.8
NUP50-216ENST00000486184 HMBOX1Q6NT76 420 aa10.08□□□□□ -0.8
NUP50-216ENST00000486184 ZNF620Q6ZNG0 422 aa10.08□□□□□ -0.8
NUP50-216ENST00000486184 Q6ZT83 130 aa10.08□□□□□ -0.8
NUP50-216ENST00000486184 RASSF6Q6ZTQ3 369 aa10.08□□□□□ -0.8
NUP50-216ENST00000486184 KIF18BQ86Y91 864 aa10.08□□□□□ -0.8
NUP50-216ENST00000486184 HS3ST5Q8IZT8 346 aa10.08□□□□□ -0.8
NUP50-216ENST00000486184 ZIC4Q8N9L1 334 aa10.08□□□□□ -0.8
NUP50-216ENST00000486184 OR6X1Q8NH79 312 aa10.08□□□□□ -0.8
NUP50-216ENST00000486184 TEX47Q8TBZ9 253 aa10.08□□□□□ -0.8
NUP50-216ENST00000486184 DNAJC9Q8WXX5 260 aa10.08□□□□□ -0.8
NUP50-216ENST00000486184 RNASE6Q93091 150 aaKnown RBP10.08□□□□□ -0.8
NUP50-216ENST00000486184 ZNF566Q969W8 418 aa10.08□□□□□ -0.8
NUP50-216ENST00000486184 TXNDC15Q96J42 360 aa10.08□□□□□ -0.8
NUP50-216ENST00000486184 ZNF570Q96NI8 536 aa10.08□□□□□ -0.8
NUP50-216ENST00000486184 OR2M2Q96R28 347 aa10.08□□□□□ -0.8
NUP50-216ENST00000486184 GPA33Q99795 319 aa10.08□□□□□ -0.8
NUP50-216ENST00000486184 PKP2Q99959 881 aa10.08□□□□□ -0.8
NUP50-216ENST00000486184 KATNB1Q9BVA0 655 aa10.08□□□□□ -0.8
NUP50-216ENST00000486184 IFT27Q9BW83 186 aa10.08□□□□□ -0.8
NUP50-216ENST00000486184 TXNIPQ9H3M7 391 aa10.08□□□□□ -0.8
NUP50-216ENST00000486184 NTN4Q9HB63 628 aa10.08□□□□□ -0.8
NUP50-216ENST00000486184 GALNT8Q9NY28 637 aa10.08□□□□□ -0.8
NUP50-216ENST00000486184 JKAMPQ9P055 326 aa10.08□□□□□ -0.8
NUP50-216ENST00000486184 IL20RAQ9UHF4 553 aa10.08□□□□□ -0.8
NUP50-216ENST00000486184 PRSS50Q9UI38 385 aa10.08□□□□□ -0.8
NUP50-216ENST00000486184 KLF2Q9Y5W3 355 aaPredicted RBP10.08□□□□□ -0.8
NUP50-216ENST00000486184 HELZ2Q9BYK8 2649 aaKnown RBP10.07□□□□□ -0.8
NUP50-216ENST00000486184 TENM4Q6N022 2769 aa10.07□□□□□ -0.8
NUP50-216ENST00000486184 A1L4Q6 167 aa10.07□□□□□ -0.8
NUP50-216ENST00000486184 NPIPB13A6NJU9 1138 aa10.07□□□□□ -0.8
NUP50-216ENST00000486184 NPIPB4C9JG80 1138 aa10.07□□□□□ -0.8
NUP50-216ENST00000486184 M0R3G1 203 aa10.07□□□□□ -0.8
NUP50-216ENST00000486184 PTP4A3O75365 173 aa10.07□□□□□ -0.8
NUP50-216ENST00000486184 IGHMP01871 453 aa10.07□□□□□ -0.8
NUP50-216ENST00000486184 CD14P08571 375 aa10.07□□□□□ -0.8
NUP50-216ENST00000486184 RNF224P0DH78 156 aa10.07□□□□□ -0.8
NUP50-216ENST00000486184 PRKACGP22612 351 aa10.07□□□□□ -0.8
NUP50-216ENST00000486184 IL32P24001 234 aa10.07□□□□□ -0.8
NUP50-216ENST00000486184 CD79BP40259 229 aa10.07□□□□□ -0.8
NUP50-216ENST00000486184 PEX19P40855 299 aa10.07□□□□□ -0.8
NUP50-216ENST00000486184 CSNK1A1P48729 337 aa10.07□□□□□ -0.8
NUP50-216ENST00000486184 ERVK-25P63136 954 aa10.07□□□□□ -0.8
NUP50-216ENST00000486184 ITGADQ13349 1161 aa10.07□□□□□ -0.8
NUP50-216ENST00000486184 P2RY6Q15077 328 aa10.07□□□□□ -0.8
NUP50-216ENST00000486184 RCN1Q15293 331 aa10.07□□□□□ -0.8
NUP50-216ENST00000486184 CDSNQ15517 529 aa10.07□□□□□ -0.8
NUP50-216ENST00000486184 RFX4Q33E94 735 aa10.07□□□□□ -0.8
NUP50-216ENST00000486184 FBXL19-AS1Q494R0 122 aa10.07□□□□□ -0.8
NUP50-216ENST00000486184 GPR139Q6DWJ6 353 aa10.07□□□□□ -0.8
NUP50-216ENST00000486184 DPY19L2P2Q6ZN68 376 aa10.07□□□□□ -0.8
NUP50-216ENST00000486184 PQLC1Q8N2U9 271 aa10.07□□□□□ -0.8
NUP50-216ENST00000486184 CLDN22Q8N7P3 220 aa10.07□□□□□ -0.8
NUP50-216ENST00000486184 ASB10Q8WXI3 467 aa10.07□□□□□ -0.8
NUP50-216ENST00000486184 SLC25A44Q96H78 314 aaPredicted RBP10.07□□□□□ -0.8
NUP50-216ENST00000486184 SAMD8Q96LT4 415 aa10.07□□□□□ -0.8
NUP50-216ENST00000486184 ALKBH3Q96Q83 286 aaPredicted RBP10.07□□□□□ -0.8
NUP50-216ENST00000486184 TSPAN32Q96QS1 320 aa10.07□□□□□ -0.8
NUP50-216ENST00000486184 NIPSNAP1Q9BPW8 284 aa10.07□□□□□ -0.8
NUP50-216ENST00000486184 OSBPL10Q9BXB5 764 aa10.07□□□□□ -0.8
NUP50-216ENST00000486184 TEX12Q9BXU0 123 aa10.07□□□□□ -0.8
NUP50-216ENST00000486184 ULBP2Q9BZM5 246 aa10.07□□□□□ -0.8
NUP50-216ENST00000486184 LINC00470Q9BZP3 86 aa10.07□□□□□ -0.8
NUP50-216ENST00000486184 ENKD1Q9H0I2 346 aa10.07□□□□□ -0.8
NUP50-216ENST00000486184 EGLN3Q9H6Z9 239 aa10.07□□□□□ -0.8
NUP50-216ENST00000486184 PAPOLBQ9NRJ5 636 aaKnown RBP10.07□□□□□ -0.8
NUP50-216ENST00000486184 KRT84Q9NSB2 600 aa10.07□□□□□ -0.8
NUP50-216ENST00000486184 MALT1Q9UDY8 824 aa10.07□□□□□ -0.8
NUP50-216ENST00000486184 ENOPH1Q9UHY7 261 aa10.07□□□□□ -0.8
NUP50-216ENST00000486184 ZNF346Q9UL40 294 aaKnown RBP10.07□□□□□ -0.8
NUP50-216ENST00000486184 OAZ3Q9UMX2 235 aa10.07□□□□□ -0.8
NUP50-216ENST00000486184 POFUT2Q9Y2G5 429 aa10.07□□□□□ -0.8
NUP50-216ENST00000486184 ORC6Q9Y5N6 252 aa10.07□□□□□ -0.8
NUP50-216ENST00000486184 TEX13CA0A0J9YWL9 993 aa10.06□□□□□ -0.8
NUP50-216ENST00000486184 CIB4A0PJX0 185 aa10.06□□□□□ -0.8
NUP50-216ENST00000486184 ZNF432O94892 652 aa10.06□□□□□ -0.8
NUP50-216ENST00000486184 SOX14O95416 240 aa10.06□□□□□ -0.8
NUP50-216ENST00000486184 PPP1R3DO95685 299 aa10.06□□□□□ -0.8
NUP50-216ENST00000486184 ACADSP16219 412 aa10.06□□□□□ -0.8
NUP50-216ENST00000486184 POU1F1P28069 291 aa10.06□□□□□ -0.8
NUP50-216ENST00000486184 SDHAP31040 664 aa10.06□□□□□ -0.8
NUP50-216ENST00000486184 HOXC12P31275 282 aa10.06□□□□□ -0.8
NUP50-216ENST00000486184 NTF4P34130 210 aa10.06□□□□□ -0.8
NUP50-216ENST00000486184 ELF3P78545 371 aaPredicted RBP10.06□□□□□ -0.8
NUP50-216ENST00000486184 TGFBR3Q03167 851 aa10.06□□□□□ -0.8
NUP50-216ENST00000486184 CD47Q08722 323 aa10.06□□□□□ -0.8
NUP50-216ENST00000486184 KRR1Q13601 381 aaKnown RBP10.06□□□□□ -0.8
NUP50-216ENST00000486184 FHL1Q13642 323 aa10.06□□□□□ -0.8
NUP50-216ENST00000486184 SLC36A3Q495N2 470 aa10.06□□□□□ -0.8
NUP50-216ENST00000486184 CLEC12AQ5QGZ9 265 aa10.06□□□□□ -0.8
NUP50-216ENST00000486184 TSPO2Q5TGU0 170 aa10.06□□□□□ -0.8
NUP50-216ENST00000486184 ZNF474Q6S9Z5 364 aaPredicted RBP10.06□□□□□ -0.8
NUP50-216ENST00000486184 KLHL17Q6TDP4 642 aa10.06□□□□□ -0.8
NUP50-216ENST00000486184 CD300LDQ6UXZ3 194 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms