RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 KCNE5Q9UJ90 142 aa8.39□□□□□ -1.07
TMEM39A-208ENST00000486159 DKKL1Q9UK85 242 aa8.39□□□□□ -1.07
TMEM39A-208ENST00000486159 ZNF337Q9Y3M9 751 aa8.39□□□□□ -1.07
TMEM39A-208ENST00000486159 RPL36Q9Y3U8 105 aaKnown RBP8.39□□□□□ -1.07
TMEM39A-208ENST00000486159 HEATR5AQ86XA9 2040 aa8.39□□□□□ -1.07
TMEM39A-208ENST00000486159 NIPBLQ6KC79 2804 aaeCLIP8.39□□□□□ -1.07
TMEM39A-208ENST00000486159 SERINC4A6NH21 518 aa8.38□□□□□ -1.07
TMEM39A-208ENST00000486159 TRIM64BA6NI03 449 aa8.38□□□□□ -1.07
TMEM39A-208ENST00000486159 DEFB108AA8MXU0 73 aa8.38□□□□□ -1.07
TMEM39A-208ENST00000486159 SEC14L5O43304 696 aa8.38□□□□□ -1.07
TMEM39A-208ENST00000486159 HCRTR2O43614 444 aa8.38□□□□□ -1.07
TMEM39A-208ENST00000486159 XPNPEP2O43895 674 aa8.38□□□□□ -1.07
TMEM39A-208ENST00000486159 IGF2P01344 180 aa8.38□□□□□ -1.07
TMEM39A-208ENST00000486159 TP53P04637 393 aaPredicted RBP8.38□□□□□ -1.07
TMEM39A-208ENST00000486159 HK1P19367 917 aa8.38□□□□□ -1.07
TMEM39A-208ENST00000486159 POU1F1P28069 291 aa8.38□□□□□ -1.07
TMEM39A-208ENST00000486159 IL12BP29460 328 aa8.38□□□□□ -1.07
TMEM39A-208ENST00000486159 EVI2BP34910 448 aa8.38□□□□□ -1.07
TMEM39A-208ENST00000486159 SLC6A8P48029 635 aa8.38□□□□□ -1.07
TMEM39A-208ENST00000486159 PCYT1AP49585 367 aa8.38□□□□□ -1.07
TMEM39A-208ENST00000486159 PNLIPRP2P54317 469 aa8.38□□□□□ -1.07
TMEM39A-208ENST00000486159 CTBP2P56545 445 aa8.38□□□□□ -1.07
TMEM39A-208ENST00000486159 EMX1Q04741 257 aaPredicted RBP8.38□□□□□ -1.07
TMEM39A-208ENST00000486159 PRKCDQ05655 676 aa8.38□□□□□ -1.07
TMEM39A-208ENST00000486159 KLHL26Q53HC5 615 aa8.38□□□□□ -1.07
TMEM39A-208ENST00000486159 PDZK1Q5T2W1 519 aa8.38□□□□□ -1.07
TMEM39A-208ENST00000486159 UBE2UQ5VVX9 321 aa8.38□□□□□ -1.07
TMEM39A-208ENST00000486159 ULK3Q6PHR2 472 aa8.38□□□□□ -1.07
TMEM39A-208ENST00000486159 TMPRSS11FQ6ZWK6 438 aa8.38□□□□□ -1.07
TMEM39A-208ENST00000486159 ZAR1Q86SH2 424 aa8.38□□□□□ -1.07
TMEM39A-208ENST00000486159 KIF18BQ86Y91 864 aa8.38□□□□□ -1.07
TMEM39A-208ENST00000486159 CLVS1Q8IUQ0 354 aaPredicted RBP8.38□□□□□ -1.07
TMEM39A-208ENST00000486159 CNEP1R1Q8N9A8 125 aa8.38□□□□□ -1.07
TMEM39A-208ENST00000486159 FADS6Q8N9I5 356 aa8.38□□□□□ -1.07
TMEM39A-208ENST00000486159 ZNF610Q8N9Z0 462 aa8.38□□□□□ -1.07
TMEM39A-208ENST00000486159 DUSP19Q8WTR2 217 aa8.38□□□□□ -1.07
TMEM39A-208ENST00000486159 ZFAND2BQ8WV99 257 aa8.38□□□□□ -1.07
TMEM39A-208ENST00000486159 DNAJA4Q8WW22 397 aaPredicted RBP8.38□□□□□ -1.07
TMEM39A-208ENST00000486159 TMEM239Q8WW34 195 aa8.38□□□□□ -1.07
TMEM39A-208ENST00000486159 SMPDL3BQ92485 455 aa8.38□□□□□ -1.07
TMEM39A-208ENST00000486159 TMIGD2Q96BF3 282 aa8.38□□□□□ -1.07
TMEM39A-208ENST00000486159 ISOC1Q96CN7 298 aa8.38□□□□□ -1.07
TMEM39A-208ENST00000486159 ZC3HAV1LQ96H79 300 aaKnown RBP8.38□□□□□ -1.07
TMEM39A-208ENST00000486159 OCSTAMPQ9BR26 566 aa8.38□□□□□ -1.07
TMEM39A-208ENST00000486159 SFXN3Q9BWM7 321 aa8.38□□□□□ -1.07
TMEM39A-208ENST00000486159 CDCA4Q9BXL8 241 aa8.38□□□□□ -1.07
TMEM39A-208ENST00000486159 SLC19A3Q9BZV2 496 aa8.38□□□□□ -1.07
TMEM39A-208ENST00000486159 CCDC90BQ9GZT6 254 aa8.38□□□□□ -1.07
TMEM39A-208ENST00000486159 FBXO34Q9NWN3 711 aa8.38□□□□□ -1.07
TMEM39A-208ENST00000486159 PAK1IP1Q9NWT1 392 aaPredicted RBP8.38□□□□□ -1.07
TMEM39A-208ENST00000486159 PPP4R1LQ9P1A2 415 aa8.38□□□□□ -1.07
TMEM39A-208ENST00000486159 ERVK-18Q9QC07 812 aa8.38□□□□□ -1.07
TMEM39A-208ENST00000486159 RPS6KB2Q9UBS0 482 aa8.38□□□□□ -1.07
TMEM39A-208ENST00000486159 FOXD3Q9UJU5 478 aaPredicted RBP8.38□□□□□ -1.07
TMEM39A-208ENST00000486159 SLC7A7Q9UM01 511 aa8.38□□□□□ -1.07
TMEM39A-208ENST00000486159 BAIAP2Q9UQB8 552 aa8.38□□□□□ -1.07
TMEM39A-208ENST00000486159 MED31Q9Y3C7 131 aa8.38□□□□□ -1.07
TMEM39A-208ENST00000486159 CDH10Q9Y6N8 788 aa8.38□□□□□ -1.07
TMEM39A-208ENST00000486159 A0A0B4J2E0 115 aa8.37□□□□□ -1.07
TMEM39A-208ENST00000486159 A0A1B0GX12 115 aa8.37□□□□□ -1.07
TMEM39A-208ENST00000486159 A0A1W2PQD3 144 aa8.37□□□□□ -1.07
TMEM39A-208ENST00000486159 H3BML4 177 aa8.37□□□□□ -1.07
TMEM39A-208ENST00000486159 SCDO00767 359 aa8.37□□□□□ -1.07
TMEM39A-208ENST00000486159 FRS3O43559 492 aa8.37□□□□□ -1.07
TMEM39A-208ENST00000486159 AQP8O94778 261 aa8.37□□□□□ -1.07
TMEM39A-208ENST00000486159 LYPD3O95274 346 aa8.37□□□□□ -1.07
TMEM39A-208ENST00000486159 CSTAP01040 98 aa8.37□□□□□ -1.07
TMEM39A-208ENST00000486159 CGAP01215 116 aa8.37□□□□□ -1.07
TMEM39A-208ENST00000486159 HPGDP15428 266 aa8.37□□□□□ -1.07
TMEM39A-208ENST00000486159 TBXA2RP21731 343 aa8.37□□□□□ -1.07
TMEM39A-208ENST00000486159 LOXP28300 417 aaPredicted RBP8.37□□□□□ -1.07
TMEM39A-208ENST00000486159 SLC15A1P46059 708 aa8.37□□□□□ -1.07
TMEM39A-208ENST00000486159 RNF144AP50876 292 aaPredicted RBP8.37□□□□□ -1.07
TMEM39A-208ENST00000486159 COPZ1P61923 177 aa8.37□□□□□ -1.07
TMEM39A-208ENST00000486159 NKX6-1P78426 367 aaPredicted RBP8.37□□□□□ -1.07
TMEM39A-208ENST00000486159 EFNB1P98172 346 aa8.37□□□□□ -1.07
TMEM39A-208ENST00000486159 SORDQ00796 357 aa8.37□□□□□ -1.07
TMEM39A-208ENST00000486159 LSAMPQ13449 338 aa8.37□□□□□ -1.07
TMEM39A-208ENST00000486159 GINS1Q14691 196 aa8.37□□□□□ -1.07
TMEM39A-208ENST00000486159 SF3B4Q15427 424 aaKnown RBP eCLIP8.37□□□□□ -1.076e-8■■□□□ 13.5
TMEM39A-208ENST00000486159 KLHL22Q53GT1 634 aa8.37□□□□□ -1.07
TMEM39A-208ENST00000486159 RAET1LQ5VY80 246 aa8.37□□□□□ -1.07
TMEM39A-208ENST00000486159 AHSA2Q719I0 299 aa8.37□□□□□ -1.07
TMEM39A-208ENST00000486159 P4HA3Q7Z4N8 544 aa8.37□□□□□ -1.07
TMEM39A-208ENST00000486159 HMGN2P46Q86SG4 172 aa8.37□□□□□ -1.07
TMEM39A-208ENST00000486159 ANKRD13BQ86YJ7 626 aa8.37□□□□□ -1.07
TMEM39A-208ENST00000486159 NKAIN4Q8IVV8 208 aa8.37□□□□□ -1.07
TMEM39A-208ENST00000486159 CCDC103Q8IW40 242 aa8.37□□□□□ -1.07
TMEM39A-208ENST00000486159 NRMQ8IXM6 262 aa8.37□□□□□ -1.07
TMEM39A-208ENST00000486159 STX19Q8N4C7 294 aa8.37□□□□□ -1.07
TMEM39A-208ENST00000486159 FAM71CQ8NEG0 241 aa8.37□□□□□ -1.07
TMEM39A-208ENST00000486159 OR4K17Q8NGC6 315 aa8.37□□□□□ -1.07
TMEM39A-208ENST00000486159 FNDC9Q8TBE3 224 aa8.37□□□□□ -1.07
TMEM39A-208ENST00000486159 CNOT9Q92600 299 aaKnown RBP8.37□□□□□ -1.07
TMEM39A-208ENST00000486159 GGHQ92820 318 aa8.37□□□□□ -1.07
TMEM39A-208ENST00000486159 RFKQ969G6 155 aa8.37□□□□□ -1.07
TMEM39A-208ENST00000486159 NMD3Q96D46 503 aaKnown RBP8.37□□□□□ -1.07
TMEM39A-208ENST00000486159 LRRC46Q96FV0 321 aa8.37□□□□□ -1.07
TMEM39A-208ENST00000486159 DACH2Q96NX9 599 aa8.37□□□□□ -1.07
TMEM39A-208ENST00000486159 TM9SF2Q99805 663 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms