RNA–Protein interactions for RNA: ENST00000486039.1

SNX5-213, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-213ENST00000486039 ATP6V1G2-DDX39BF2Z307 99 aa17.03■□□□□ 0.32
SNX5-213ENST00000486039 SMAD7O15105 426 aaKnown RBP17.03■□□□□ 0.32
SNX5-213ENST00000486039 RNF13O43567 381 aa17.03■□□□□ 0.32
SNX5-213ENST00000486039 SEC14L2O76054 403 aa17.03■□□□□ 0.32
SNX5-213ENST00000486039 UMPSP11172 480 aa17.03■□□□□ 0.32
SNX5-213ENST00000486039 PAX7P23759 505 aa17.03■□□□□ 0.32
SNX5-213ENST00000486039 BIDP55957 195 aa17.03■□□□□ 0.32
SNX5-213ENST00000486039 AGAP6Q5VW22 663 aa17.03■□□□□ 0.32
SNX5-213ENST00000486039 C11orf71Q6IPW1 123 aa17.03■□□□□ 0.32
SNX5-213ENST00000486039 SLC35D2Q76EJ3 337 aa17.03■□□□□ 0.32
SNX5-213ENST00000486039 CPLX4Q7Z7G2 160 aa17.03■□□□□ 0.32
SNX5-213ENST00000486039 TMEM239Q8WW34 195 aa17.03■□□□□ 0.32
SNX5-213ENST00000486039 CMTM5Q96DZ9 223 aa17.03■□□□□ 0.32
SNX5-213ENST00000486039 C20orf141Q9NUB4 165 aa17.03■□□□□ 0.32
SNX5-213ENST00000486039 ABCD2Q9UBJ2 740 aa17.03■□□□□ 0.32
SNX5-213ENST00000486039 SNX13Q9Y5W8 968 aa17.03■□□□□ 0.32
SNX5-213ENST00000486039 ATP23Q9Y6H3 246 aa17.03■□□□□ 0.32
SNX5-213ENST00000486039 NSD1Q96L73 2696 aaPredicted RBP17.03■□□□□ 0.32
SNX5-213ENST00000486039 NDUFS7O75251 213 aa17.02■□□□□ 0.32
SNX5-213ENST00000486039 IGLV1-44P01699 117 aa17.02■□□□□ 0.32
SNX5-213ENST00000486039 HIST1H2ABP04908 130 aa17.02■□□□□ 0.32
SNX5-213ENST00000486039 THRBP10828 461 aa17.02■□□□□ 0.32
SNX5-213ENST00000486039 FUT1P19526 365 aa17.02■□□□□ 0.32
SNX5-213ENST00000486039 PRDX6P30041 224 aa17.02■□□□□ 0.32
SNX5-213ENST00000486039 FABP6P51161 128 aa17.02■□□□□ 0.32
SNX5-213ENST00000486039 PSME3P61289 254 aa17.02■□□□□ 0.32
SNX5-213ENST00000486039 GNGT1P63211 74 aa17.02■□□□□ 0.32
SNX5-213ENST00000486039 CBLL1Q75N03 491 aa17.02■□□□□ 0.32
SNX5-213ENST00000486039 HIST3H2AQ7L7L0 130 aa17.02■□□□□ 0.32
SNX5-213ENST00000486039 MUC15Q8N387 334 aa17.02■□□□□ 0.32
SNX5-213ENST00000486039 OR6N1Q8NGY5 312 aa17.02■□□□□ 0.32
SNX5-213ENST00000486039 OR6X1Q8NH79 312 aa17.02■□□□□ 0.32
SNX5-213ENST00000486039 LZICQ8WZA0 190 aa17.02■□□□□ 0.32
SNX5-213ENST00000486039 HIST1H2ACQ93077 130 aa17.02■□□□□ 0.32
SNX5-213ENST00000486039 PRRC1Q96M27 445 aa17.02■□□□□ 0.32
SNX5-213ENST00000486039 SEC61A2Q9H9S3 476 aa17.02■□□□□ 0.32
SNX5-213ENST00000486039 CBLN4Q9NTU7 201 aa17.02■□□□□ 0.32
SNX5-213ENST00000486039 GDF2Q9UK05 429 aaPredicted RBP17.02■□□□□ 0.32
SNX5-213ENST00000486039 ALPK2Q86TB3 2170 aa17.01■□□□□ 0.31
SNX5-213ENST00000486039 BLOC1S5-TXNDC5H3BN57 136 aa17.01■□□□□ 0.31
SNX5-213ENST00000486039 J3KTA2 159 aa17.01■□□□□ 0.31
SNX5-213ENST00000486039 GSTA4O15217 222 aa17.01■□□□□ 0.31
SNX5-213ENST00000486039 OR7A10O76100 309 aa17.01■□□□□ 0.31
SNX5-213ENST00000486039 IGF2P01344 180 aa17.01■□□□□ 0.31
SNX5-213ENST00000486039 IGKV3-15P01624 115 aa17.01■□□□□ 0.31
SNX5-213ENST00000486039 IGHV4-39P01824 125 aa17.01■□□□□ 0.31
SNX5-213ENST00000486039 CECR9P0C854 216 aa17.01■□□□□ 0.31
SNX5-213ENST00000486039 CBR1P16152 277 aa17.01■□□□□ 0.31
SNX5-213ENST00000486039 YAP1P46937 504 aaKnown RBP17.01■□□□□ 0.31
SNX5-213ENST00000486039 LSM11P83369 360 aaKnown RBP eCLIP17.01■□□□□ 0.31
SNX5-213ENST00000486039 MELKQ14680 651 aa17.01■□□□□ 0.31
SNX5-213ENST00000486039 C3orf36Q3SXR2 165 aa17.01■□□□□ 0.31
SNX5-213ENST00000486039 ZNF544Q6NX49 715 aa17.01■□□□□ 0.31
SNX5-213ENST00000486039 NANOGNBQ7Z5D8 188 aa17.01■□□□□ 0.31
SNX5-213ENST00000486039 MYPOPQ86VE0 399 aaPredicted RBP17.01■□□□□ 0.31
SNX5-213ENST00000486039 FBXL14Q8N1E6 418 aa17.01■□□□□ 0.31
SNX5-213ENST00000486039 FAM169BQ8N8A8 192 aa17.01■□□□□ 0.31
SNX5-213ENST00000486039 TMEM54Q969K7 222 aa17.01■□□□□ 0.31
SNX5-213ENST00000486039 SGTBQ96EQ0 304 aa17.01■□□□□ 0.31
SNX5-213ENST00000486039 ADAD1Q96M93 576 aaKnown RBP17.01■□□□□ 0.31
SNX5-213ENST00000486039 HS6ST2Q96MM7 605 aa17.01■□□□□ 0.31
SNX5-213ENST00000486039 KATNB1Q9BVA0 655 aa17.01■□□□□ 0.31
SNX5-213ENST00000486039 ULBP2Q9BZM5 246 aa17.01■□□□□ 0.31
SNX5-213ENST00000486039 B3GAT2Q9NPZ5 323 aa17.01■□□□□ 0.31
SNX5-213ENST00000486039 ABCA2Q9BZC7 2435 aa17.01■□□□□ 0.31
SNX5-213ENST00000486039 PIP5K1CO60331 668 aa17■□□□□ 0.31
SNX5-213ENST00000486039 ZNF682O95780 498 aa17■□□□□ 0.31
SNX5-213ENST00000486039 SERPINA1P01009 418 aa17■□□□□ 0.31
SNX5-213ENST00000486039 CELA3BP08861 270 aa17■□□□□ 0.31
SNX5-213ENST00000486039 NCK1P16333 377 aa17■□□□□ 0.31
SNX5-213ENST00000486039 CALCRP30988 508 aa17■□□□□ 0.31
SNX5-213ENST00000486039 CSNK1A1P48729 337 aa17■□□□□ 0.31
SNX5-213ENST00000486039 NAAAQ02083 359 aa17■□□□□ 0.31
SNX5-213ENST00000486039 RPL18Q07020 188 aaKnown RBP17■□□□□ 0.31
SNX5-213ENST00000486039 ST3GAL3Q11203 375 aa17■□□□□ 0.31
SNX5-213ENST00000486039 ZNF627Q7L945 461 aa17■□□□□ 0.31
SNX5-213ENST00000486039 PIGWQ7Z7B1 504 aa17■□□□□ 0.31
SNX5-213ENST00000486039 LIPHQ8WWY8 451 aa17■□□□□ 0.31
SNX5-213ENST00000486039 KCTD14Q9BQ13 255 aaPredicted RBP17■□□□□ 0.31
SNX5-213ENST00000486039 CACNG6Q9BXT2 260 aa17■□□□□ 0.31
SNX5-213ENST00000486039 RHCGQ9UBD6 479 aa17■□□□□ 0.31
SNX5-213ENST00000486039 POFUT2Q9Y2G5 429 aa17■□□□□ 0.31
SNX5-213ENST00000486039 MED31Q9Y3C7 131 aa17■□□□□ 0.31
SNX5-213ENST00000486039 NDUFAB1O14561 156 aa16.99■□□□□ 0.31
SNX5-213ENST00000486039 FFAR1O14842 300 aa16.99■□□□□ 0.31
SNX5-213ENST00000486039 IFNW1P05000 195 aa16.99■□□□□ 0.31
SNX5-213ENST00000486039 TSPAN19P0C672 248 aa16.99■□□□□ 0.31
SNX5-213ENST00000486039 APOBEC3AP31941 199 aaPredicted RBP16.99■□□□□ 0.31
SNX5-213ENST00000486039 AQP2P41181 271 aa16.99■□□□□ 0.31
SNX5-213ENST00000486039 CLEC12BQ2HXU8 276 aa16.99■□□□□ 0.31
SNX5-213ENST00000486039 IFI44LQ53G44 452 aa16.99■□□□□ 0.31
SNX5-213ENST00000486039 ZNF813Q6ZN06 617 aa16.99■□□□□ 0.31
SNX5-213ENST00000486039 MDP1Q86V88 176 aa16.99■□□□□ 0.31
SNX5-213ENST00000486039 CCDC36Q8IYA8 594 aa16.99■□□□□ 0.31
SNX5-213ENST00000486039 SLC25A44Q96H78 314 aaPredicted RBP16.99■□□□□ 0.31
SNX5-213ENST00000486039 HSH2DQ96JZ2 352 aa16.99■□□□□ 0.31
SNX5-213ENST00000486039 FOXB1Q99853 325 aa16.99■□□□□ 0.31
SNX5-213ENST00000486039 MOV10Q9HCE1 1003 aaKnown RBP16.99■□□□□ 0.31
SNX5-213ENST00000486039 MAN2C1Q9NTJ4 1040 aa16.99■□□□□ 0.31
SNX5-213ENST00000486039 B3GNT2Q9NY97 397 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms